Gene annotation
Transcriptome id Sobic.001G291900.1
Synonym Sb01g028530
Functional annotation expressed protein
UniProt C5WRE2
Pfam -
Panther DB PTHR36356 PTHR36356:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44870 : -
RAP-DB (Rice) LOC_Os10g41940.1 : expressed protein
MaizeGDB (Corn) Zm00025a003445
Brachypodium KQJ97880
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G291900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
2 Sobic.001G104800 expressed protein -
3 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
4 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
5 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
6 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
7 Sobic.001G309300 expressed protein -
8 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
9 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
10 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
11 Sobic.006G256600 expressed protein -
12 Sobic.004G012900 expressed protein -
13 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
14 Sobic.001G531400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
15 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
16 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
17 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
18 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
19 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
20 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -


Gene co-expression network
sample Sobic001G291900 Sobic001G291900 Sobic001G368500 Sobic001G368500 Sobic001G291900--Sobic001G368500 Sobic001G104800 Sobic001G104800 Sobic001G291900--Sobic001G104800 Sobic003G085000 Sobic003G085000 Sobic001G291900--Sobic003G085000 Sobic004G336000 Sobic004G336000 Sobic001G291900--Sobic004G336000 Sobic005G002900 Sobic005G002900 Sobic001G291900--Sobic005G002900 Sobic009G059300 Sobic009G059300 Sobic001G291900--Sobic009G059300 Sobic001G309300 Sobic001G309300 Sobic001G291900--Sobic001G309300 Sobic006G055800 Sobic006G055800 Sobic001G291900--Sobic006G055800 Sobic006G106400 Sobic006G106400 Sobic001G291900--Sobic006G106400 Sobic003G324700 Sobic003G324700 Sobic001G368500--Sobic003G324700 Sobic005G110400 Sobic005G110400 Sobic001G368500--Sobic005G110400 Sobic003G432500 Sobic003G432500 Sobic001G368500--Sobic003G432500 Sobic001G469933 Sobic001G469933 Sobic001G368500--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic001G368500--Sobic001G122400 Sobic008G073100 Sobic008G073100 Sobic001G368500--Sobic008G073100 Sobic002G401800 Sobic002G401800 Sobic001G368500--Sobic002G401800 Sobic003G271900 Sobic003G271900 Sobic001G368500--Sobic003G271900 Sobic005G143500 Sobic005G143500 Sobic001G368500--Sobic005G143500 Sobic001G104800--Sobic001G291900 Sobic009G030900 Sobic009G030900 Sobic001G104800--Sobic009G030900 Sobic001G104800--Sobic001G368500 Sobic001G104800--Sobic001G469933 Sobic001G104800--Sobic001G122400 Sobic001G104800--Sobic003G324700 Sobic004G335800 Sobic004G335800 Sobic001G104800--Sobic004G335800 Sobic007G090400 Sobic007G090400 Sobic001G104800--Sobic007G090400 Sobic002G152800 Sobic002G152800 Sobic001G104800--Sobic002G152800 Sobic006G256600 Sobic006G256600 Sobic003G085000--Sobic006G256600 Sobic003G085000--Sobic001G291900 Sobic003G085000--Sobic006G055800 Sobic010G255100 Sobic010G255100 Sobic003G085000--Sobic010G255100 Sobic003G085000--Sobic004G336000 Sobic001G531400 Sobic001G531400 Sobic003G085000--Sobic001G531400 Sobic003G085000--Sobic005G002900 Sobic003G085000--Sobic001G104800 Sobic004G065300 Sobic004G065300 Sobic003G085000--Sobic004G065300 Sobic004G336000--Sobic001G309300 Sobic001G495200 Sobic001G495200 Sobic004G336000--Sobic001G495200 Sobic004G336000--Sobic008G073100 Sobic004G336000--Sobic001G291900 Sobic004G336000--Sobic003G432500 Sobic004G336000--Sobic006G055800 Sobic004G011300 Sobic004G011300 Sobic004G336000--Sobic004G011300 Sobic004G336000--Sobic003G085000 Sobic003G387100 Sobic003G387100 Sobic004G336000--Sobic003G387100 Sobic001G083100 Sobic001G083100 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic009G148500 Sobic009G148500 Sobic005G002900--Sobic009G148500 Sobic005G002900--Sobic001G469933 Sobic005G002900--Sobic001G291900 Sobic005G002900--Sobic006G106400 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic002G131700 Sobic002G131700 Sobic005G002900--Sobic002G131700 Sobic009G059300--Sobic003G387100 Sobic004G012900 Sobic004G012900 Sobic009G059300--Sobic004G012900 Sobic010G005500 Sobic010G005500 Sobic009G059300--Sobic010G005500 Sobic006G207800 Sobic006G207800 Sobic009G059300--Sobic006G207800 Sobic008G171300 Sobic008G171300 Sobic009G059300--Sobic008G171300 Sobic009G059300--Sobic001G309300 Sobic007G052400 Sobic007G052400 Sobic009G059300--Sobic007G052400 Sobic009G059300--Sobic009G030900 Sobic009G059300--Sobic008G073100 Sobic001G309300--Sobic008G073100 Sobic001G309300--Sobic004G336000 Sobic001G309300--Sobic009G059300 Sobic001G309300--Sobic003G387100 Sobic001G309300--Sobic005G110400 Sobic004G331700 Sobic004G331700 Sobic001G309300--Sobic004G331700 Sobic001G309300--Sobic001G291900 Sobic001G309300--Sobic004G012900 Sobic001G308200 Sobic001G308200 Sobic001G309300--Sobic001G308200 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic006G055800--Sobic001G368500 Sobic006G055800--Sobic009G148500 Sobic006G055800--Sobic002G152800 Sobic006G055800--Sobic001G083100 Sobic006G055800--Sobic005G110400 Sobic006G106400--Sobic004G011300 Sobic006G106400--Sobic008G073100 Sobic008G039600 Sobic008G039600 Sobic006G106400--Sobic008G039600 Sobic006G106400--Sobic001G368500 Sobic006G106400--Sobic005G143500 Sobic006G106400--Sobic002G401800 Sobic001G283700 Sobic001G283700 Sobic006G106400--Sobic001G283700 Sobic006G106400--Sobic009G148500 Sobic002G272100 Sobic002G272100 Sobic006G106400--Sobic002G272100
Octagon: transcription factors


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