Gene annotation
Transcriptome id Sobic.001G104800.1
Synonym Sb01g009360
Functional annotation expressed protein
UniProt C5WM04
Pfam PF11255
Panther DB PTHR35283 PTHR35283:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G44920 : -
RAP-DB (Rice) LOC_Os03g51930.2 : expressed protein
MaizeGDB (Corn) Zm00025a007998
Brachypodium KQK13404
Barley -
Wheat TraesCS4D02G059100 , TraesCS4A02G255600 , TraesCS4B02G059400
Populus -


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cDNA sequences
Sobic.001G104800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G291900 expressed protein -
2 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
3 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
4 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
5 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
6 Sobic.003G324700 expressed protein -
7 Sobic.004G335800 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
8 Sobic.007G090400 expressed protein -
9 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
10 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
11 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
12 Sobic.006G021600 uncharacterized membrane protein, putative, expressed -
13 Sobic.001G527100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
14 Sobic.003G386300 expressed protein -
15 Sobic.004G311100 -(PubMedID : 29017446)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
16 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
17 Sobic.007G143700 immunophilin(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
18 Sobic.010G277600 - -
19 Sobic.002G353300 Geranilgeranil pyrophosphate synthetase 1 GGPS1 (Os)(PubMedID : 27208977)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
20 Sobic.002G272100 expressed protein -


Gene co-expression network
sample Sobic001G104800 Sobic001G104800 Sobic001G291900 Sobic001G291900 Sobic001G104800--Sobic001G291900 Sobic009G030900 Sobic009G030900 Sobic001G104800--Sobic009G030900 Sobic001G368500 Sobic001G368500 Sobic001G104800--Sobic001G368500 Sobic001G469933 Sobic001G469933 Sobic001G104800--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic001G104800--Sobic001G122400 Sobic003G324700 Sobic003G324700 Sobic001G104800--Sobic003G324700 Sobic004G335800 Sobic004G335800 Sobic001G104800--Sobic004G335800 Sobic007G090400 Sobic007G090400 Sobic001G104800--Sobic007G090400 Sobic002G152800 Sobic002G152800 Sobic001G104800--Sobic002G152800 Sobic001G291900--Sobic001G368500 Sobic001G291900--Sobic001G104800 Sobic003G085000 Sobic003G085000 Sobic001G291900--Sobic003G085000 Sobic004G336000 Sobic004G336000 Sobic001G291900--Sobic004G336000 Sobic005G002900 Sobic005G002900 Sobic001G291900--Sobic005G002900 Sobic009G059300 Sobic009G059300 Sobic001G291900--Sobic009G059300 Sobic001G309300 Sobic001G309300 Sobic001G291900--Sobic001G309300 Sobic006G055800 Sobic006G055800 Sobic001G291900--Sobic006G055800 Sobic006G106400 Sobic006G106400 Sobic001G291900--Sobic006G106400 Sobic010G005500 Sobic010G005500 Sobic009G030900--Sobic010G005500 Sobic010G277600 Sobic010G277600 Sobic009G030900--Sobic010G277600 Sobic007G052400 Sobic007G052400 Sobic009G030900--Sobic007G052400 Sobic009G183700 Sobic009G183700 Sobic009G030900--Sobic009G183700 Sobic003G387800 Sobic003G387800 Sobic009G030900--Sobic003G387800 Sobic009G030900--Sobic009G059300 Sobic003G002300 Sobic003G002300 Sobic009G030900--Sobic003G002300 Sobic008G171300 Sobic008G171300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500 Sobic001G368500--Sobic003G324700 Sobic005G110400 Sobic005G110400 Sobic001G368500--Sobic005G110400 Sobic003G432500 Sobic003G432500 Sobic001G368500--Sobic003G432500 Sobic001G368500--Sobic001G469933 Sobic001G368500--Sobic001G122400 Sobic008G073100 Sobic008G073100 Sobic001G368500--Sobic008G073100 Sobic002G401800 Sobic002G401800 Sobic001G368500--Sobic002G401800 Sobic003G271900 Sobic003G271900 Sobic001G368500--Sobic003G271900 Sobic005G143500 Sobic005G143500 Sobic001G368500--Sobic005G143500 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic001G469933--Sobic003G324700 Sobic003G077400 Sobic003G077400 Sobic001G469933--Sobic003G077400 Sobic001G469933--Sobic006G055800 Sobic001G469933--Sobic003G432500 Sobic001G469933--Sobic004G335800 Sobic001G083100 Sobic001G083100 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic003G386300 Sobic003G386300 Sobic001G122400--Sobic003G386300 Sobic001G122400--Sobic004G335800 Sobic001G527100 Sobic001G527100 Sobic001G122400--Sobic001G527100 Sobic001G122400--Sobic003G324700 Sobic001G122400--Sobic001G469933 Sobic001G240000 Sobic001G240000 Sobic001G122400--Sobic001G240000 Sobic001G122400--Sobic001G368500 Sobic002G198000 Sobic002G198000 Sobic001G122400--Sobic002G198000 Sobic001G391400 Sobic001G391400 Sobic001G122400--Sobic001G391400 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic003G324700--Sobic001G469933 Sobic003G324700--Sobic004G335800 Sobic003G324700--Sobic006G055800 Sobic003G324700--Sobic002G152800 Sobic003G324700--Sobic003G386300 Sobic003G324700--Sobic003G432500 Sobic003G324700--Sobic001G527100 Sobic001G040000 Sobic001G040000 Sobic004G335800--Sobic001G040000 Sobic004G335800--Sobic001G122400 Sobic004G335800--Sobic003G386300 Sobic004G335800--Sobic001G527100 Sobic004G116100 Sobic004G116100 Sobic004G335800--Sobic004G116100 Sobic004G335800--Sobic003G324700 Sobic007G143700 Sobic007G143700 Sobic004G335800--Sobic007G143700 Sobic004G335800--Sobic001G391400 Sobic004G335800--Sobic001G240000 Sobic007G090400--Sobic003G324700 Sobic007G090400--Sobic002G152800 Sobic007G090400--Sobic001G368500 Sobic007G090400--Sobic006G055800 Sobic007G090400--Sobic003G271900 Sobic007G090400--Sobic001G104800 Sobic007G090400--Sobic004G336000 Sobic001G531400 Sobic001G531400 Sobic007G090400--Sobic001G531400 Sobic007G090400--Sobic003G432500 Sobic002G152800--Sobic003G324700 Sobic002G152800--Sobic004G335800 Sobic002G152800--Sobic006G055800 Sobic002G152800--Sobic001G469933 Sobic002G152800--Sobic001G368500 Sobic002G152800--Sobic003G432500 Sobic002G152800--Sobic007G090400 Sobic002G214600 Sobic002G214600 Sobic002G152800--Sobic002G214600 Sobic002G152800--Sobic001G122400
Octagon: transcription factors


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