Gene annotation
Transcriptome id Sobic.007G090400.1
Synonym PGR7, Sb07g007860
Functional annotation expressed protein
UniProt C5YJJ5
Pfam PF10615
Panther DB PTHR13343 PTHR13343:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21200 : proton gradient regulation 7
RAP-DB (Rice) LOC_Os08g15500.1 : expressed protein
MaizeGDB (Corn) Zm00025a047736 , Zm00025a029885
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G090400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G324700 expressed protein -
2 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
3 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
4 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
5 Sobic.003G271900 expressed protein -
6 Sobic.001G104800 expressed protein -
7 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
8 Sobic.001G531400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
9 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
10 Sobic.004G335800 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
11 Sobic.006G021600 uncharacterized membrane protein, putative, expressed -
12 Sobic.009G131600 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
13 Sobic.001G309300 expressed protein -
14 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
15 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
16 Sobic.004G065300 CR084 protein, putative, expressed -
17 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
18 Sobic.007G143700 immunophilin(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
19 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
20 Sobic.004G212400 co-chaperone GrpE protein, putative, expressed K03687: molecular chaperone GrpE


Gene co-expression network
sample Sobic007G090400 Sobic007G090400 Sobic003G324700 Sobic003G324700 Sobic007G090400--Sobic003G324700 Sobic002G152800 Sobic002G152800 Sobic007G090400--Sobic002G152800 Sobic001G368500 Sobic001G368500 Sobic007G090400--Sobic001G368500 Sobic006G055800 Sobic006G055800 Sobic007G090400--Sobic006G055800 Sobic003G271900 Sobic003G271900 Sobic007G090400--Sobic003G271900 Sobic001G104800 Sobic001G104800 Sobic007G090400--Sobic001G104800 Sobic004G336000 Sobic004G336000 Sobic007G090400--Sobic004G336000 Sobic001G531400 Sobic001G531400 Sobic007G090400--Sobic001G531400 Sobic003G432500 Sobic003G432500 Sobic007G090400--Sobic003G432500 Sobic001G122400 Sobic001G122400 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic001G469933 Sobic001G469933 Sobic003G324700--Sobic001G469933 Sobic004G335800 Sobic004G335800 Sobic003G324700--Sobic004G335800 Sobic003G324700--Sobic006G055800 Sobic003G324700--Sobic002G152800 Sobic003G386300 Sobic003G386300 Sobic003G324700--Sobic003G386300 Sobic003G324700--Sobic003G432500 Sobic001G527100 Sobic001G527100 Sobic003G324700--Sobic001G527100 Sobic002G152800--Sobic003G324700 Sobic002G152800--Sobic004G335800 Sobic002G152800--Sobic006G055800 Sobic002G152800--Sobic001G469933 Sobic002G152800--Sobic001G368500 Sobic002G152800--Sobic003G432500 Sobic002G152800--Sobic007G090400 Sobic002G214600 Sobic002G214600 Sobic002G152800--Sobic002G214600 Sobic002G152800--Sobic001G122400 Sobic001G368500--Sobic003G324700 Sobic005G110400 Sobic005G110400 Sobic001G368500--Sobic005G110400 Sobic001G368500--Sobic003G432500 Sobic001G368500--Sobic001G469933 Sobic001G368500--Sobic001G122400 Sobic008G073100 Sobic008G073100 Sobic001G368500--Sobic008G073100 Sobic002G401800 Sobic002G401800 Sobic001G368500--Sobic002G401800 Sobic001G368500--Sobic003G271900 Sobic005G143500 Sobic005G143500 Sobic001G368500--Sobic005G143500 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic005G002900 Sobic005G002900 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic006G055800--Sobic001G368500 Sobic009G148500 Sobic009G148500 Sobic006G055800--Sobic009G148500 Sobic006G055800--Sobic002G152800 Sobic001G083100 Sobic001G083100 Sobic006G055800--Sobic001G083100 Sobic006G055800--Sobic005G110400 Sobic003G271900--Sobic001G368500 Sobic003G271900--Sobic003G432500 Sobic002G272100 Sobic002G272100 Sobic003G271900--Sobic002G272100 Sobic003G271900--Sobic005G143500 Sobic003G271900--Sobic003G324700 Sobic003G271900--Sobic006G055800 Sobic008G039600 Sobic008G039600 Sobic003G271900--Sobic008G039600 Sobic003G271900--Sobic005G110400 Sobic006G106400 Sobic006G106400 Sobic003G271900--Sobic006G106400 Sobic001G291900 Sobic001G291900 Sobic001G104800--Sobic001G291900 Sobic009G030900 Sobic009G030900 Sobic001G104800--Sobic009G030900 Sobic001G104800--Sobic001G368500 Sobic001G104800--Sobic001G469933 Sobic001G104800--Sobic001G122400 Sobic001G104800--Sobic003G324700 Sobic001G104800--Sobic004G335800 Sobic001G104800--Sobic007G090400 Sobic001G104800--Sobic002G152800 Sobic001G309300 Sobic001G309300 Sobic004G336000--Sobic001G309300 Sobic001G495200 Sobic001G495200 Sobic004G336000--Sobic001G495200 Sobic004G336000--Sobic008G073100 Sobic004G336000--Sobic001G291900 Sobic004G336000--Sobic003G432500 Sobic004G336000--Sobic006G055800 Sobic004G011300 Sobic004G011300 Sobic004G336000--Sobic004G011300 Sobic003G085000 Sobic003G085000 Sobic004G336000--Sobic003G085000 Sobic003G387100 Sobic003G387100 Sobic004G336000--Sobic003G387100 Sobic001G531400--Sobic001G291900 Sobic001G531400--Sobic003G085000 Sobic007G208300 Sobic007G208300 Sobic001G531400--Sobic007G208300 Sobic001G531400--Sobic007G090400 Sobic001G531400--Sobic004G336000 Sobic001G531400--Sobic006G106400 Sobic001G531400--Sobic001G122400 Sobic001G531400--Sobic001G104800 Sobic001G531400--Sobic006G055800 Sobic003G432500--Sobic001G368500 Sobic003G432500--Sobic006G055800 Sobic003G432500--Sobic001G469933 Sobic003G432500--Sobic003G271900 Sobic003G432500--Sobic005G110400 Sobic003G432500--Sobic003G324700 Sobic003G432500--Sobic008G073100 Sobic003G432500--Sobic004G336000 Sobic003G432500--Sobic002G152800
Octagon: transcription factors


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