Gene annotation
Transcriptome id Sobic.009G131600.1
Synonym Sb09g019800
Functional annotation mTERF domain containing protein, expressed
UniProt A0A1Z5R2G2
Pfam PF02536
Panther DB PTHR13068 PTHR13068:SF24
NCBI CDD KOG1267; Mitochondrial transcription termination factor, mTERF
KEGG Orthology K15032; mTERF domain-containing protein, mitochondrial
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding


Orthologs (automatic annotation)
TAIR AT4G02990 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os05g33500.1 : mTERF domain containing protein, expressed
MaizeGDB (Corn) Zm00025a037510
Brachypodium KQK06339
Barley HORVU1Hr1G061210.8 , HORVU1Hr1G061210.7
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
2 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
3 Sobic.010G035200 whirly transcription factor domain containing protein, expressed -
4 Sobic.003G324700 expressed protein -
5 Sobic.002G131700 RNA recognition motif containing protein, putative, expressed -
6 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
7 Sobic.007G090400 expressed protein -
8 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
9 Sobic.002G056800 YGGT family protein, putative, expressed -
10 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -
11 Sobic.008G130900 ribosomal protein S6, putative, expressed -
12 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
13 Sobic.001G424300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K08081: tropinone reductase I
14 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
15 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
16 Sobic.001G437200 ATP-dependent Clp protease ATP-binding subunit, putative, expressed -
17 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
18 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
19 Sobic.002G013700 PPR2, putative, expressed -
20 Sobic.004G065300 CR084 protein, putative, expressed -


Gene co-expression network
sample Sobic009G131600 Sobic009G131600 Sobic006G055800 Sobic006G055800 Sobic009G131600--Sobic006G055800 Sobic007G171800 Sobic007G171800 Sobic009G131600--Sobic007G171800 Sobic010G035200 Sobic010G035200 Sobic009G131600--Sobic010G035200 Sobic003G324700 Sobic003G324700 Sobic009G131600--Sobic003G324700 Sobic002G131700 Sobic002G131700 Sobic009G131600--Sobic002G131700 Sobic003G128400 Sobic003G128400 Sobic009G131600--Sobic003G128400 Sobic007G090400 Sobic007G090400 Sobic009G131600--Sobic007G090400 Sobic005G002900 Sobic005G002900 Sobic009G131600--Sobic005G002900 Sobic002G056800 Sobic002G056800 Sobic009G131600--Sobic002G056800 Sobic003G432500 Sobic003G432500 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic001G469933 Sobic001G469933 Sobic006G055800--Sobic001G469933 Sobic001G368500 Sobic001G368500 Sobic006G055800--Sobic001G368500 Sobic009G148500 Sobic009G148500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic001G083100 Sobic001G083100 Sobic006G055800--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic006G055800--Sobic005G110400 Sobic010G011200 Sobic010G011200 Sobic007G171800--Sobic010G011200 Sobic005G110481 Sobic005G110481 Sobic007G171800--Sobic005G110481 Sobic002G251400 Sobic002G251400 Sobic007G171800--Sobic002G251400 Sobic007G171800--Sobic002G131700 Sobic009G042200 Sobic009G042200 Sobic007G171800--Sobic009G042200 Sobic001G148200 Sobic001G148200 Sobic007G171800--Sobic001G148200 Sobic007G171800--Sobic003G324700 Sobic007G034500 Sobic007G034500 Sobic007G171800--Sobic007G034500 Sobic007G171800--Sobic010G035200 Sobic010G035200--Sobic001G469933 Sobic010G035200--Sobic003G324700 Sobic010G035200--Sobic007G171800 Sobic010G035200--Sobic002G131700 Sobic010G035200--Sobic001G083100 Sobic001G122400 Sobic001G122400 Sobic010G035200--Sobic001G122400 Sobic008G039600 Sobic008G039600 Sobic010G035200--Sobic008G039600 Sobic010G035200--Sobic009G131600 Sobic004G164100 Sobic004G164100 Sobic010G035200--Sobic004G164100 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic003G324700--Sobic001G469933 Sobic004G335800 Sobic004G335800 Sobic003G324700--Sobic004G335800 Sobic003G324700--Sobic006G055800 Sobic003G324700--Sobic002G152800 Sobic003G386300 Sobic003G386300 Sobic003G324700--Sobic003G386300 Sobic003G324700--Sobic003G432500 Sobic001G527100 Sobic001G527100 Sobic003G324700--Sobic001G527100 Sobic004G179200 Sobic004G179200 Sobic002G131700--Sobic004G179200 Sobic003G330100 Sobic003G330100 Sobic002G131700--Sobic003G330100 Sobic006G111600 Sobic006G111600 Sobic002G131700--Sobic006G111600 Sobic002G131700--Sobic007G171800 Sobic002G131700--Sobic005G002900 Sobic002G131700--Sobic010G035200 Sobic003G221700 Sobic003G221700 Sobic002G131700--Sobic003G221700 Sobic002G131700--Sobic001G469933 Sobic002G131700--Sobic001G083100 Sobic001G375000 Sobic001G375000 Sobic003G128400--Sobic001G375000 Sobic007G101300 Sobic007G101300 Sobic003G128400--Sobic007G101300 Sobic003G045300 Sobic003G045300 Sobic003G128400--Sobic003G045300 Sobic005G184300 Sobic005G184300 Sobic003G128400--Sobic005G184300 Sobic004G003900 Sobic004G003900 Sobic003G128400--Sobic004G003900 Sobic003G128400--Sobic006G055800 Sobic002G156100 Sobic002G156100 Sobic003G128400--Sobic002G156100 Sobic002G297400 Sobic002G297400 Sobic003G128400--Sobic002G297400 Sobic010G255100 Sobic010G255100 Sobic003G128400--Sobic010G255100 Sobic007G090400--Sobic003G324700 Sobic007G090400--Sobic002G152800 Sobic007G090400--Sobic001G368500 Sobic007G090400--Sobic006G055800 Sobic003G271900 Sobic003G271900 Sobic007G090400--Sobic003G271900 Sobic001G104800 Sobic001G104800 Sobic007G090400--Sobic001G104800 Sobic004G336000 Sobic004G336000 Sobic007G090400--Sobic004G336000 Sobic001G531400 Sobic001G531400 Sobic007G090400--Sobic001G531400 Sobic007G090400--Sobic003G432500 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic005G002900--Sobic009G148500 Sobic005G002900--Sobic001G469933 Sobic001G291900 Sobic001G291900 Sobic005G002900--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic005G002900--Sobic006G106400 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic005G002900--Sobic002G131700 Sobic001G196200 Sobic001G196200 Sobic002G056800--Sobic001G196200 Sobic003G310100 Sobic003G310100 Sobic002G056800--Sobic003G310100 Sobic002G424100 Sobic002G424100 Sobic002G056800--Sobic002G424100 Sobic002G056800--Sobic005G002900 Sobic002G056800--Sobic009G131600 Sobic002G056800--Sobic006G055800 Sobic003G085000 Sobic003G085000 Sobic002G056800--Sobic003G085000 Sobic002G056800--Sobic002G131700 Sobic001G281500 Sobic001G281500 Sobic002G056800--Sobic001G281500
Octagon: transcription factors


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