Gene annotation
Transcriptome id Sobic.003G310100.2,Sobic.003G310100.1
Synonym Sb03g035830, ATNAP13, EMB2751
Functional annotation ABC transporter, ATP-binding protein, putative, expressed
UniProt C5XKZ9 , A0A1W0VZP9
Pfam PF00005
Panther DB PTHR24220 PTHR24220:SF218
NCBI CDD KOG2355; Predicted ABC-type transport, ATPase component/CCR4 associated factor
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT4G33460 : ABC transporter family protein
RAP-DB (Rice) LOC_Os01g56400.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a039912
Brachypodium -
Barley HORVU3Hr1G075100.1 , HORVU3Hr1G075100.2 , HORVU3Hr1G075100.3 , HORVU3Hr1G075100.4 , HORVU3Hr1G075100.5
Wheat TraesCS3B02G340600 , TraesCS3B02G340600 , TraesCS3A02G296500 , TraesCS3A02G296500 , TraesCS3D02G306200 , TraesCS3D02G306200 , TraesCS3D02G306200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G424300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K08081: tropinone reductase I
2 Sobic.002G056800 YGGT family protein, putative, expressed -
3 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
4 Sobic.001G489800 HNH endonuclease domain-containing protein, putative, expressed -
5 Sobic.001G437200 ATP-dependent Clp protease ATP-binding subunit, putative, expressed -
6 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
7 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
8 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -
9 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -
10 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
11 Sobic.003G084500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
12 Sobic.009G028400 expressed protein -
13 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
14 Sobic.009G131600 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
15 Sobic.003G286300 GTPase of unknown function domain containing protein, putative, expressed K03978: GTP-binding protein
16 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
17 Sobic.002G131700 RNA recognition motif containing protein, putative, expressed -
18 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
19 Sobic.008G063200 expressed protein -
20 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit


Gene co-expression network
sample Sobic003G310100 Sobic003G310100 Sobic001G424300 Sobic001G424300 Sobic003G310100--Sobic001G424300 Sobic002G056800 Sobic002G056800 Sobic003G310100--Sobic002G056800 Sobic001G196200 Sobic001G196200 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic001G437200 Sobic001G437200 Sobic003G310100--Sobic001G437200 Sobic001G281500 Sobic001G281500 Sobic003G310100--Sobic001G281500 Sobic006G237100 Sobic006G237100 Sobic003G310100--Sobic006G237100 Sobic002G424100 Sobic002G424100 Sobic003G310100--Sobic002G424100 Sobic006G111600 Sobic006G111600 Sobic003G310100--Sobic006G111600 Sobic001G424300--Sobic003G310100 Sobic001G424300--Sobic001G489800 Sobic003G128400 Sobic003G128400 Sobic001G424300--Sobic003G128400 Sobic009G131600 Sobic009G131600 Sobic001G424300--Sobic009G131600 Sobic001G424300--Sobic001G281500 Sobic005G002900 Sobic005G002900 Sobic001G424300--Sobic005G002900 Sobic006G055800 Sobic006G055800 Sobic001G424300--Sobic006G055800 Sobic002G156100 Sobic002G156100 Sobic001G424300--Sobic002G156100 Sobic001G424300--Sobic001G437200 Sobic002G056800--Sobic001G196200 Sobic002G056800--Sobic003G310100 Sobic002G056800--Sobic002G424100 Sobic002G056800--Sobic005G002900 Sobic002G056800--Sobic009G131600 Sobic002G056800--Sobic006G055800 Sobic003G085000 Sobic003G085000 Sobic002G056800--Sobic003G085000 Sobic002G131700 Sobic002G131700 Sobic002G056800--Sobic002G131700 Sobic002G056800--Sobic001G281500 Sobic001G196200--Sobic002G056800 Sobic001G196200--Sobic002G131700 Sobic003G254600 Sobic003G254600 Sobic001G196200--Sobic003G254600 Sobic001G196200--Sobic003G310100 Sobic001G196200--Sobic006G111600 Sobic001G196200--Sobic005G002900 Sobic009G028400 Sobic009G028400 Sobic001G196200--Sobic009G028400 Sobic004G179200 Sobic004G179200 Sobic001G196200--Sobic004G179200 Sobic001G196200--Sobic002G424100 Sobic001G489800--Sobic001G424300 Sobic001G489800--Sobic003G310100 Sobic001G489800--Sobic003G254600 Sobic001G489800--Sobic001G281500 Sobic006G273400 Sobic006G273400 Sobic001G489800--Sobic006G273400 Sobic002G081500 Sobic002G081500 Sobic001G489800--Sobic002G081500 Sobic001G489800--Sobic001G196200 Sobic002G297400 Sobic002G297400 Sobic001G489800--Sobic002G297400 Sobic001G489800--Sobic003G128400 Sobic003G298400 Sobic003G298400 Sobic001G437200--Sobic003G298400 Sobic001G437200--Sobic006G237100 Sobic001G437200--Sobic003G310100 Sobic002G404900 Sobic002G404900 Sobic001G437200--Sobic002G404900 Sobic001G437200--Sobic009G131600 Sobic001G437200--Sobic001G424300 Sobic001G445200 Sobic001G445200 Sobic001G437200--Sobic001G445200 Sobic003G286300 Sobic003G286300 Sobic001G437200--Sobic003G286300 Sobic001G161400 Sobic001G161400 Sobic001G437200--Sobic001G161400 Sobic001G281500--Sobic006G237100 Sobic007G116100 Sobic007G116100 Sobic001G281500--Sobic007G116100 Sobic006G107600 Sobic006G107600 Sobic001G281500--Sobic006G107600 Sobic001G099000 Sobic001G099000 Sobic001G281500--Sobic001G099000 Sobic001G375000 Sobic001G375000 Sobic001G281500--Sobic001G375000 Sobic007G171800 Sobic007G171800 Sobic001G281500--Sobic007G171800 Sobic006G263800 Sobic006G263800 Sobic001G281500--Sobic006G263800 Sobic010G027200 Sobic010G027200 Sobic001G281500--Sobic010G027200 Sobic005G184300 Sobic005G184300 Sobic001G281500--Sobic005G184300 Sobic006G237100--Sobic001G281500 Sobic006G237100--Sobic010G027200 Sobic006G237100--Sobic001G375000 Sobic006G237100--Sobic002G404900 Sobic002G140000 Sobic002G140000 Sobic006G237100--Sobic002G140000 Sobic006G237100--Sobic001G161400 Sobic006G237100--Sobic001G437200 Sobic006G237100--Sobic007G116100 Sobic006G237100--Sobic003G310100 Sobic002G424100--Sobic003G085000 Sobic002G424100--Sobic005G002900 Sobic002G424100--Sobic002G056800 Sobic002G424100--Sobic002G131700 Sobic002G424100--Sobic003G310100 Sobic002G424100--Sobic006G111600 Sobic001G531400 Sobic001G531400 Sobic002G424100--Sobic001G531400 Sobic002G424100--Sobic009G028400 Sobic001G291900 Sobic001G291900 Sobic002G424100--Sobic001G291900 Sobic003G330100 Sobic003G330100 Sobic006G111600--Sobic003G330100 Sobic003G221700 Sobic003G221700 Sobic006G111600--Sobic003G221700 Sobic006G111600--Sobic002G131700 Sobic006G111600--Sobic004G179200 Sobic009G234200 Sobic009G234200 Sobic006G111600--Sobic009G234200 Sobic004G250200 Sobic004G250200 Sobic006G111600--Sobic004G250200 Sobic010G183400 Sobic010G183400 Sobic006G111600--Sobic010G183400 Sobic006G197700 Sobic006G197700 Sobic006G111600--Sobic006G197700 Sobic006G111600--Sobic009G028400
Octagon: transcription factors


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