Gene annotation
Transcriptome id Sobic.002G424100.2,Sobic.002G424100.1
Synonym Sb02g043490
Functional annotation parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed
UniProt C5X6A5 , A0A1W0W7Y8
Pfam PF00581 PF13616 PF13616
Panther DB PTHR10657
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19370 : rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein
RAP-DB (Rice) LOC_Os07g48810.1 : parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a057992 , Zm00025a049216
Brachypodium KQK14555
Barley HORVU2Hr1G016510.3 , HORVU2Hr1G016510.2 , HORVU2Hr1G016510.5 , HORVU2Hr1G016510.4 , HORVU2Hr1G016510.7 , HORVU2Hr1G016510.6 , HORVU2Hr1G016510.9 , HORVU2Hr1G016510.8 , HORVU2Hr1G016510.10 , HORVU2Hr1G016510.1
Wheat TraesCS2B02G113300 , TraesCS2D02G096900 , TraesCS2D02G096900 , TraesCS2A02G097600
Populus -


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cDNA sequences
Sobic.002G424100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
2 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
3 Sobic.002G056800 YGGT family protein, putative, expressed -
4 Sobic.002G131700 RNA recognition motif containing protein, putative, expressed -
5 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
6 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -
7 Sobic.001G531400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
8 Sobic.009G028400 expressed protein -
9 Sobic.001G291900 expressed protein -
10 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
11 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
12 Sobic.008G063200 expressed protein -
13 Sobic.003G125400 Fe-S metabolism associated domain containing protein, expressed -
14 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
15 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
16 Sobic.006G256600 expressed protein -
17 Sobic.001G447700 expressed protein -
18 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.010G265500 expressed protein -
20 Sobic.006G125000 expressed protein -


Gene co-expression network
sample Sobic002G424100 Sobic002G424100 Sobic003G085000 Sobic003G085000 Sobic002G424100--Sobic003G085000 Sobic005G002900 Sobic005G002900 Sobic002G424100--Sobic005G002900 Sobic002G056800 Sobic002G056800 Sobic002G424100--Sobic002G056800 Sobic002G131700 Sobic002G131700 Sobic002G424100--Sobic002G131700 Sobic003G310100 Sobic003G310100 Sobic002G424100--Sobic003G310100 Sobic006G111600 Sobic006G111600 Sobic002G424100--Sobic006G111600 Sobic001G531400 Sobic001G531400 Sobic002G424100--Sobic001G531400 Sobic009G028400 Sobic009G028400 Sobic002G424100--Sobic009G028400 Sobic001G291900 Sobic001G291900 Sobic002G424100--Sobic001G291900 Sobic006G256600 Sobic006G256600 Sobic003G085000--Sobic006G256600 Sobic003G085000--Sobic001G291900 Sobic006G055800 Sobic006G055800 Sobic003G085000--Sobic006G055800 Sobic010G255100 Sobic010G255100 Sobic003G085000--Sobic010G255100 Sobic004G336000 Sobic004G336000 Sobic003G085000--Sobic004G336000 Sobic003G085000--Sobic001G531400 Sobic003G085000--Sobic005G002900 Sobic001G104800 Sobic001G104800 Sobic003G085000--Sobic001G104800 Sobic004G065300 Sobic004G065300 Sobic003G085000--Sobic004G065300 Sobic001G083100 Sobic001G083100 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic009G148500 Sobic009G148500 Sobic005G002900--Sobic009G148500 Sobic001G469933 Sobic001G469933 Sobic005G002900--Sobic001G469933 Sobic005G002900--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic005G002900--Sobic006G106400 Sobic003G432500 Sobic003G432500 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic005G002900--Sobic002G131700 Sobic001G196200 Sobic001G196200 Sobic002G056800--Sobic001G196200 Sobic002G056800--Sobic003G310100 Sobic002G056800--Sobic002G424100 Sobic002G056800--Sobic005G002900 Sobic009G131600 Sobic009G131600 Sobic002G056800--Sobic009G131600 Sobic002G056800--Sobic006G055800 Sobic002G056800--Sobic003G085000 Sobic002G056800--Sobic002G131700 Sobic001G281500 Sobic001G281500 Sobic002G056800--Sobic001G281500 Sobic004G179200 Sobic004G179200 Sobic002G131700--Sobic004G179200 Sobic003G330100 Sobic003G330100 Sobic002G131700--Sobic003G330100 Sobic002G131700--Sobic006G111600 Sobic007G171800 Sobic007G171800 Sobic002G131700--Sobic007G171800 Sobic002G131700--Sobic005G002900 Sobic010G035200 Sobic010G035200 Sobic002G131700--Sobic010G035200 Sobic003G221700 Sobic003G221700 Sobic002G131700--Sobic003G221700 Sobic002G131700--Sobic001G469933 Sobic002G131700--Sobic001G083100 Sobic001G424300 Sobic001G424300 Sobic003G310100--Sobic001G424300 Sobic003G310100--Sobic002G056800 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic001G437200 Sobic001G437200 Sobic003G310100--Sobic001G437200 Sobic003G310100--Sobic001G281500 Sobic006G237100 Sobic006G237100 Sobic003G310100--Sobic006G237100 Sobic003G310100--Sobic002G424100 Sobic003G310100--Sobic006G111600 Sobic006G111600--Sobic003G330100 Sobic006G111600--Sobic003G221700 Sobic006G111600--Sobic002G131700 Sobic006G111600--Sobic004G179200 Sobic009G234200 Sobic009G234200 Sobic006G111600--Sobic009G234200 Sobic004G250200 Sobic004G250200 Sobic006G111600--Sobic004G250200 Sobic010G183400 Sobic010G183400 Sobic006G111600--Sobic010G183400 Sobic006G197700 Sobic006G197700 Sobic006G111600--Sobic006G197700 Sobic006G111600--Sobic009G028400 Sobic001G531400--Sobic001G291900 Sobic001G531400--Sobic003G085000 Sobic007G208300 Sobic007G208300 Sobic001G531400--Sobic007G208300 Sobic007G090400 Sobic007G090400 Sobic001G531400--Sobic007G090400 Sobic001G531400--Sobic004G336000 Sobic001G531400--Sobic006G106400 Sobic001G122400 Sobic001G122400 Sobic001G531400--Sobic001G122400 Sobic001G531400--Sobic001G104800 Sobic001G531400--Sobic006G055800 Sobic001G006000 Sobic001G006000 Sobic009G028400--Sobic001G006000 Sobic001G339100 Sobic001G339100 Sobic009G028400--Sobic001G339100 Sobic009G028400--Sobic006G111600 Sobic005G021600 Sobic005G021600 Sobic009G028400--Sobic005G021600 Sobic009G028400--Sobic003G221700 Sobic009G028400--Sobic003G330100 Sobic007G178500 Sobic007G178500 Sobic009G028400--Sobic007G178500 Sobic009G028400--Sobic004G179200 Sobic009G028400--Sobic003G310100 Sobic001G368500 Sobic001G368500 Sobic001G291900--Sobic001G368500 Sobic001G291900--Sobic001G104800 Sobic001G291900--Sobic003G085000 Sobic001G291900--Sobic004G336000 Sobic001G291900--Sobic005G002900 Sobic009G059300 Sobic009G059300 Sobic001G291900--Sobic009G059300 Sobic001G309300 Sobic001G309300 Sobic001G291900--Sobic001G309300 Sobic001G291900--Sobic006G055800 Sobic001G291900--Sobic006G106400
Octagon: transcription factors


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