Gene annotation
Transcriptome id Sobic.006G125000.1
Synonym Sb06g020530
Functional annotation expressed protein
UniProt C5YAV5
Pfam -
Panther DB PTHR36397
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40500 : -
RAP-DB (Rice) LOC_Os04g40670.1 : expressed protein
MaizeGDB (Corn) Zm00025a056325
Brachypodium KQJ83211
Barley HORVU2Hr1G083620.1 , HORVU2Hr1G083620.3 , HORVU2Hr1G083620.2 , HORVU2Hr1G083620.6
Wheat TraesCS2B02G360500 , TraesCS2A02G322300 , TraesCS2D02G340800 , TraesCS2B02G360500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G342200 dihydroflavonol-4-reductase, putative, expressed -
2 Sobic.001G175700 expressed protein -
3 Sobic.009G131800 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
4 Sobic.006G050400 expressed protein -
5 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
6 Sobic.004G253400 tic20 protein-related, putative, expressed -
7 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
8 Sobic.009G028400 expressed protein -
9 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
10 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
11 Sobic.006G155500 expressed protein -
12 Sobic.001G291900 expressed protein -
13 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.008G063200 expressed protein -
15 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
16 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -
17 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
18 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
19 Sobic.007G132500 F-box domain containing protein, expressed -
20 Sobic.003G328100 expressed protein -


Gene co-expression network
sample Sobic006G125000 Sobic006G125000 Sobic003G342200 Sobic003G342200 Sobic006G125000--Sobic003G342200 Sobic001G175700 Sobic001G175700 Sobic006G125000--Sobic001G175700 Sobic009G131800 Sobic009G131800 Sobic006G125000--Sobic009G131800 Sobic006G050400 Sobic006G050400 Sobic006G125000--Sobic006G050400 Sobic006G110900 Sobic006G110900 Sobic006G125000--Sobic006G110900 Sobic004G253400 Sobic004G253400 Sobic006G125000--Sobic004G253400 Sobic001G006000 Sobic001G006000 Sobic006G125000--Sobic001G006000 Sobic009G028400 Sobic009G028400 Sobic006G125000--Sobic009G028400 Sobic003G253300 Sobic003G253300 Sobic006G125000--Sobic003G253300 Sobic003G342200--Sobic006G050400 Sobic003G342200--Sobic003G253300 Sobic003G342200--Sobic001G175700 Sobic006G155500 Sobic006G155500 Sobic003G342200--Sobic006G155500 Sobic001G122300 Sobic001G122300 Sobic003G342200--Sobic001G122300 Sobic003G378600 Sobic003G378600 Sobic003G342200--Sobic003G378600 Sobic002G112400 Sobic002G112400 Sobic003G342200--Sobic002G112400 Sobic003G342200--Sobic006G125000 Sobic002G102200 Sobic002G102200 Sobic003G342200--Sobic002G102200 Sobic001G175700--Sobic006G050400 Sobic001G175700--Sobic009G131800 Sobic004G012900 Sobic004G012900 Sobic001G175700--Sobic004G012900 Sobic001G405700 Sobic001G405700 Sobic001G175700--Sobic001G405700 Sobic002G233700 Sobic002G233700 Sobic001G175700--Sobic002G233700 Sobic001G175700--Sobic003G342200 Sobic001G083100 Sobic001G083100 Sobic001G175700--Sobic001G083100 Sobic001G175700--Sobic004G253400 Sobic001G175700--Sobic006G155500 Sobic009G131800--Sobic001G175700 Sobic004G055000 Sobic004G055000 Sobic009G131800--Sobic004G055000 Sobic002G272100 Sobic002G272100 Sobic009G131800--Sobic002G272100 Sobic004G020300 Sobic004G020300 Sobic009G131800--Sobic004G020300 Sobic004G343000 Sobic004G343000 Sobic009G131800--Sobic004G343000 Sobic009G131800--Sobic001G405700 Sobic008G172700 Sobic008G172700 Sobic009G131800--Sobic008G172700 Sobic003G408000 Sobic003G408000 Sobic009G131800--Sobic003G408000 Sobic002G267900 Sobic002G267900 Sobic009G131800--Sobic002G267900 Sobic006G050400--Sobic003G342200 Sobic006G050400--Sobic006G155500 Sobic006G050400--Sobic001G175700 Sobic006G050400--Sobic002G112400 Sobic006G050400--Sobic003G253300 Sobic001G005200 Sobic001G005200 Sobic006G050400--Sobic001G005200 Sobic009G059300 Sobic009G059300 Sobic006G050400--Sobic009G059300 Sobic006G050400--Sobic002G102200 Sobic006G050400--Sobic001G122300 Sobic006G110900--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic006G110900--Sobic001G286600 Sobic006G110900--Sobic006G155500 Sobic006G214700 Sobic006G214700 Sobic006G110900--Sobic006G214700 Sobic008G063200 Sobic008G063200 Sobic006G110900--Sobic008G063200 Sobic001G118400 Sobic001G118400 Sobic006G110900--Sobic001G118400 Sobic004G224500 Sobic004G224500 Sobic006G110900--Sobic004G224500 Sobic003G328100 Sobic003G328100 Sobic006G110900--Sobic003G328100 Sobic006G110900--Sobic006G050400 Sobic004G253400--Sobic001G006000 Sobic004G253400--Sobic001G175700 Sobic004G253400--Sobic006G125000 Sobic004G253400--Sobic003G342200 Sobic004G253400--Sobic003G253300 Sobic004G253400--Sobic003G378600 Sobic004G179200 Sobic004G179200 Sobic004G253400--Sobic004G179200 Sobic004G253400--Sobic004G012900 Sobic004G253400--Sobic006G110900 Sobic010G076800 Sobic010G076800 Sobic001G006000--Sobic010G076800 Sobic001G006000--Sobic009G028400 Sobic001G006000--Sobic004G253400 Sobic001G006000--Sobic008G063200 Sobic007G076900 Sobic007G076900 Sobic001G006000--Sobic007G076900 Sobic001G006000--Sobic004G179200 Sobic001G339100 Sobic001G339100 Sobic001G006000--Sobic001G339100 Sobic001G006000--Sobic003G253300 Sobic003G245800 Sobic003G245800 Sobic001G006000--Sobic003G245800 Sobic009G028400--Sobic001G006000 Sobic009G028400--Sobic001G339100 Sobic006G111600 Sobic006G111600 Sobic009G028400--Sobic006G111600 Sobic005G021600 Sobic005G021600 Sobic009G028400--Sobic005G021600 Sobic003G221700 Sobic003G221700 Sobic009G028400--Sobic003G221700 Sobic003G330100 Sobic003G330100 Sobic009G028400--Sobic003G330100 Sobic007G178500 Sobic007G178500 Sobic009G028400--Sobic007G178500 Sobic009G028400--Sobic004G179200 Sobic003G310100 Sobic003G310100 Sobic009G028400--Sobic003G310100 Sobic003G253300--Sobic003G342200 Sobic003G253300--Sobic006G110900 Sobic003G253300--Sobic006G155500 Sobic003G253300--Sobic006G050400 Sobic003G253300--Sobic006G214700 Sobic003G284800 Sobic003G284800 Sobic003G253300--Sobic003G284800 Sobic003G253300--Sobic008G063200 Sobic003G253300--Sobic001G118400 Sobic003G253300--Sobic010G076800
Octagon: transcription factors


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