Gene annotation
Transcriptome id Sobic.002G200900.2,Sobic.002G200900.1
Synonym Sb02g024630
Functional annotation alpha/beta hydrolase fold, putative, expressed
UniProt C5XCT0 , A0A1W0W502
Pfam PF12697
Panther DB PTHR26374 PTHR26374:SF200
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74640 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os09g24710.2,LOC_Os09g24710.1 : alpha/beta hydrolase fold, putative, expressed
MaizeGDB (Corn) Zm00025a013923
Brachypodium KQJ90228
Barley HORVU5Hr1G065890.1 , HORVU5Hr1G065890.3 , HORVU5Hr1G065890.2 , HORVU5Hr1G065890.4
Wheat TraesCS5A02G227500 , TraesCS5A02G227500 , TraesCS5B02G226300 , TraesCS5D02G234900
Populus -


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cDNA sequences
Sobic.002G200900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G108200 expressed protein -
2 Sobic.004G281900 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed K01770: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
3 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
4 Sobic.001G220000 PPR repeat containing protein, expressed -
5 Sobic.004G055000 peptidase, cysteine peptidase active site, putative, expressed -
6 Sobic.003G275200 methyltransferase domain containing protein, expressed -
7 Sobic.006G155500 expressed protein -
8 Sobic.006G050400 expressed protein -
9 Sobic.002G159100 chlorophyll A-B binding protein, putative, expressed K14172: light-harvesting complex II chlorophyll a/b binding protein 7
10 Sobic.006G197300 expressed protein -
11 Sobic.004G154800 expressed protein -
12 Sobic.001G005200 expressed protein -
13 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
14 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
15 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
16 Sobic.005G004500 ferritin-1, chloroplast precursor, putative, expressed K00522: ferritin heavy chain
17 Sobic.009G131800 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
18 Sobic.004G028300 expressed protein -
19 Sobic.002G272100 expressed protein -
20 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -


Gene co-expression network
sample Sobic002G200900 Sobic002G200900 Sobic006G108200 Sobic006G108200 Sobic002G200900--Sobic006G108200 Sobic004G281900 Sobic004G281900 Sobic002G200900--Sobic004G281900 Sobic002G351600 Sobic002G351600 Sobic002G200900--Sobic002G351600 Sobic001G220000 Sobic001G220000 Sobic002G200900--Sobic001G220000 Sobic004G055000 Sobic004G055000 Sobic002G200900--Sobic004G055000 Sobic003G275200 Sobic003G275200 Sobic002G200900--Sobic003G275200 Sobic006G155500 Sobic006G155500 Sobic002G200900--Sobic006G155500 Sobic006G050400 Sobic006G050400 Sobic002G200900--Sobic006G050400 Sobic002G159100 Sobic002G159100 Sobic002G200900--Sobic002G159100 Sobic006G108200--Sobic003G275200 Sobic006G108200--Sobic002G351600 Sobic006G108200--Sobic004G055000 Sobic004G028300 Sobic004G028300 Sobic006G108200--Sobic004G028300 Sobic004G154800 Sobic004G154800 Sobic006G108200--Sobic004G154800 Sobic006G108200--Sobic002G200900 Sobic006G108200--Sobic001G220000 Sobic001G167900 Sobic001G167900 Sobic006G108200--Sobic001G167900 Sobic005G134100 Sobic005G134100 Sobic006G108200--Sobic005G134100 Sobic007G087100 Sobic007G087100 Sobic004G281900--Sobic007G087100 Sobic003G328100 Sobic003G328100 Sobic004G281900--Sobic003G328100 Sobic003G070900 Sobic003G070900 Sobic004G281900--Sobic003G070900 Sobic006G102000 Sobic006G102000 Sobic004G281900--Sobic006G102000 Sobic006G197300 Sobic006G197300 Sobic004G281900--Sobic006G197300 Sobic001G005200 Sobic001G005200 Sobic004G281900--Sobic001G005200 Sobic006G232600 Sobic006G232600 Sobic004G281900--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic004G281900--Sobic001G436400 Sobic002G072400 Sobic002G072400 Sobic004G281900--Sobic002G072400 Sobic008G050400 Sobic008G050400 Sobic002G351600--Sobic008G050400 Sobic002G272100 Sobic002G272100 Sobic002G351600--Sobic002G272100 Sobic002G351600--Sobic001G167900 Sobic002G401800 Sobic002G401800 Sobic002G351600--Sobic002G401800 Sobic008G172700 Sobic008G172700 Sobic002G351600--Sobic008G172700 Sobic002G351600--Sobic006G108200 Sobic002G351600--Sobic004G055000 Sobic004G124400 Sobic004G124400 Sobic002G351600--Sobic004G124400 Sobic002G351600--Sobic003G275200 Sobic001G220000--Sobic004G124400 Sobic004G317700 Sobic004G317700 Sobic001G220000--Sobic004G317700 Sobic004G300100 Sobic004G300100 Sobic001G220000--Sobic004G300100 Sobic001G220000--Sobic006G108200 Sobic002G356900 Sobic002G356900 Sobic001G220000--Sobic002G356900 Sobic010G231500 Sobic010G231500 Sobic001G220000--Sobic010G231500 Sobic001G220000--Sobic001G436400 Sobic001G220000--Sobic004G154800 Sobic001G220000--Sobic002G351600 Sobic004G055000--Sobic003G275200 Sobic004G055000--Sobic004G154800 Sobic004G055000--Sobic008G172700 Sobic002G267900 Sobic002G267900 Sobic004G055000--Sobic002G267900 Sobic009G131800 Sobic009G131800 Sobic004G055000--Sobic009G131800 Sobic004G326500 Sobic004G326500 Sobic004G055000--Sobic004G326500 Sobic004G055000--Sobic002G351600 Sobic004G055000--Sobic006G108200 Sobic004G055000--Sobic002G272100 Sobic003G275200--Sobic004G055000 Sobic003G275200--Sobic006G108200 Sobic003G275200--Sobic004G326500 Sobic003G275200--Sobic004G154800 Sobic003G275200--Sobic008G172700 Sobic003G275200--Sobic002G351600 Sobic001G350000 Sobic001G350000 Sobic003G275200--Sobic001G350000 Sobic008G039600 Sobic008G039600 Sobic003G275200--Sobic008G039600 Sobic003G275200--Sobic002G272100 Sobic001G118400 Sobic001G118400 Sobic006G155500--Sobic001G118400 Sobic006G155500--Sobic006G050400 Sobic006G155500--Sobic003G328100 Sobic003G253300 Sobic003G253300 Sobic006G155500--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic006G155500--Sobic001G286600 Sobic006G110900 Sobic006G110900 Sobic006G155500--Sobic006G110900 Sobic002G061900 Sobic002G061900 Sobic006G155500--Sobic002G061900 Sobic006G155500--Sobic003G070900 Sobic006G097500 Sobic006G097500 Sobic006G155500--Sobic006G097500 Sobic003G342200 Sobic003G342200 Sobic006G050400--Sobic003G342200 Sobic006G050400--Sobic006G155500 Sobic001G175700 Sobic001G175700 Sobic006G050400--Sobic001G175700 Sobic002G112400 Sobic002G112400 Sobic006G050400--Sobic002G112400 Sobic006G050400--Sobic003G253300 Sobic006G050400--Sobic001G005200 Sobic009G059300 Sobic009G059300 Sobic006G050400--Sobic009G059300 Sobic002G102200 Sobic002G102200 Sobic006G050400--Sobic002G102200 Sobic001G122300 Sobic001G122300 Sobic006G050400--Sobic001G122300 Sobic002G159100--Sobic004G124400 Sobic002G159100--Sobic002G200900 Sobic002G159100--Sobic001G220000 Sobic006G063900 Sobic006G063900 Sobic002G159100--Sobic006G063900 Sobic002G159100--Sobic006G108200 Sobic002G159100--Sobic001G350000 Sobic002G159100--Sobic001G436400 Sobic002G159100--Sobic006G197300 Sobic002G159100--Sobic001G005200
Octagon: transcription factors


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