Gene annotation
Transcriptome id Sobic.003G275200.2,Sobic.003G275200.3,Sobic.003G275200.4,Sobic.003G275200.1
Synonym Sb03g032710
Functional annotation methyltransferase domain containing protein, expressed
UniProt C5XI85 , A0A1W0VZ48
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF871
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G29590 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g51530.1 : methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a038944
Brachypodium KQK09441
Barley HORVU3Hr1G067300.5 , HORVU3Hr1G067300.4 , HORVU3Hr1G067300.7 , HORVU3Hr1G067300.6 , HORVU3Hr1G067300.1 , HORVU3Hr1G067300.3 , HORVU3Hr1G067300.2 , HORVU3Hr1G067300.9 , HORVU3Hr1G067300.8 , HORVU3Hr1G067300.21 , HORVU3Hr1G067300.22 , HORVU3Hr1G067300.10 , HORVU3Hr1G067300.12 , HORVU3Hr1G067300.20 , HORVU3Hr1G067300.23 , HORVU3Hr1G067300.11 , HORVU3Hr1G067300.13 , HORVU3Hr1G067300.15 , HORVU3Hr1G067300.14 , HORVU3Hr1G067300.17 , HORVU3Hr1G067300.16 , HORVU3Hr1G067300.19 , HORVU3Hr1G067300.18
Wheat TraesCS3B02G278300 , TraesCS3A02G249400 , TraesCS3A02G249400 , TraesCS3D02G249400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G055000 peptidase, cysteine peptidase active site, putative, expressed -
2 Sobic.006G108200 expressed protein -
3 Sobic.004G326500 PAP fibrillin family domain containing protein, expressed -
4 Sobic.004G154800 expressed protein -
5 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
6 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
7 Sobic.001G350000 expressed protein -
8 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
9 Sobic.002G272100 expressed protein -
10 Sobic.002G267900 expressed protein -
11 Sobic.009G131800 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
12 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
13 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
14 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
15 Sobic.001G167900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.004G343000 RNA recognition motif containing protein, putative, expressed -
17 Sobic.005G143500 aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed K02434: gatB, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B
18 Sobic.004G028300 expressed protein -
19 Sobic.002G198000 CRR6, putative, expressed -
20 Sobic.010G056300 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G275200 Sobic003G275200 Sobic004G055000 Sobic004G055000 Sobic003G275200--Sobic004G055000 Sobic006G108200 Sobic006G108200 Sobic003G275200--Sobic006G108200 Sobic004G326500 Sobic004G326500 Sobic003G275200--Sobic004G326500 Sobic004G154800 Sobic004G154800 Sobic003G275200--Sobic004G154800 Sobic008G172700 Sobic008G172700 Sobic003G275200--Sobic008G172700 Sobic002G351600 Sobic002G351600 Sobic003G275200--Sobic002G351600 Sobic001G350000 Sobic001G350000 Sobic003G275200--Sobic001G350000 Sobic008G039600 Sobic008G039600 Sobic003G275200--Sobic008G039600 Sobic002G272100 Sobic002G272100 Sobic003G275200--Sobic002G272100 Sobic004G055000--Sobic003G275200 Sobic004G055000--Sobic004G154800 Sobic004G055000--Sobic008G172700 Sobic002G267900 Sobic002G267900 Sobic004G055000--Sobic002G267900 Sobic009G131800 Sobic009G131800 Sobic004G055000--Sobic009G131800 Sobic004G055000--Sobic004G326500 Sobic004G055000--Sobic002G351600 Sobic004G055000--Sobic006G108200 Sobic004G055000--Sobic002G272100 Sobic006G108200--Sobic003G275200 Sobic006G108200--Sobic002G351600 Sobic006G108200--Sobic004G055000 Sobic004G028300 Sobic004G028300 Sobic006G108200--Sobic004G028300 Sobic006G108200--Sobic004G154800 Sobic002G200900 Sobic002G200900 Sobic006G108200--Sobic002G200900 Sobic001G220000 Sobic001G220000 Sobic006G108200--Sobic001G220000 Sobic001G167900 Sobic001G167900 Sobic006G108200--Sobic001G167900 Sobic005G134100 Sobic005G134100 Sobic006G108200--Sobic005G134100 Sobic004G326500--Sobic003G275200 Sobic004G326500--Sobic004G055000 Sobic002G198000 Sobic002G198000 Sobic004G326500--Sobic002G198000 Sobic004G164100 Sobic004G164100 Sobic004G326500--Sobic004G164100 Sobic004G326500--Sobic002G267900 Sobic001G527100 Sobic001G527100 Sobic004G326500--Sobic001G527100 Sobic004G326500--Sobic008G172700 Sobic004G343000 Sobic004G343000 Sobic004G326500--Sobic004G343000 Sobic001G122400 Sobic001G122400 Sobic004G326500--Sobic001G122400 Sobic004G154800--Sobic004G055000 Sobic004G154800--Sobic003G275200 Sobic004G154800--Sobic001G167900 Sobic004G154800--Sobic006G108200 Sobic004G124400 Sobic004G124400 Sobic004G154800--Sobic004G124400 Sobic004G154800--Sobic004G028300 Sobic004G154800--Sobic001G220000 Sobic004G154800--Sobic002G351600 Sobic010G062500 Sobic010G062500 Sobic004G154800--Sobic010G062500 Sobic008G172700--Sobic002G267900 Sobic008G172700--Sobic001G350000 Sobic004G239100 Sobic004G239100 Sobic008G172700--Sobic004G239100 Sobic008G172700--Sobic004G055000 Sobic003G378600 Sobic003G378600 Sobic008G172700--Sobic003G378600 Sobic010G277600 Sobic010G277600 Sobic008G172700--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic008G172700--Sobic009G183700 Sobic008G171300 Sobic008G171300 Sobic008G172700--Sobic008G171300 Sobic004G359600 Sobic004G359600 Sobic008G172700--Sobic004G359600 Sobic008G050400 Sobic008G050400 Sobic002G351600--Sobic008G050400 Sobic002G351600--Sobic002G272100 Sobic002G351600--Sobic001G167900 Sobic002G401800 Sobic002G401800 Sobic002G351600--Sobic002G401800 Sobic002G351600--Sobic008G172700 Sobic002G351600--Sobic006G108200 Sobic002G351600--Sobic004G055000 Sobic002G351600--Sobic004G124400 Sobic002G351600--Sobic003G275200 Sobic001G350000--Sobic008G172700 Sobic001G350000--Sobic003G275200 Sobic001G350000--Sobic002G351600 Sobic001G350000--Sobic004G359600 Sobic001G350000--Sobic004G239100 Sobic001G350000--Sobic002G272100 Sobic001G350000--Sobic004G055000 Sobic001G350000--Sobic008G171300 Sobic001G350000--Sobic002G267900 Sobic005G143500 Sobic005G143500 Sobic008G039600--Sobic005G143500 Sobic001G083100 Sobic001G083100 Sobic008G039600--Sobic001G083100 Sobic006G106400 Sobic006G106400 Sobic008G039600--Sobic006G106400 Sobic008G039600--Sobic002G401800 Sobic008G039600--Sobic002G272100 Sobic010G002000 Sobic010G002000 Sobic008G039600--Sobic010G002000 Sobic001G368500 Sobic001G368500 Sobic008G039600--Sobic001G368500 Sobic003G094350 Sobic003G094350 Sobic008G039600--Sobic003G094350 Sobic002G181000 Sobic002G181000 Sobic008G039600--Sobic002G181000 Sobic002G272100--Sobic002G401800 Sobic008G073100 Sobic008G073100 Sobic002G272100--Sobic008G073100 Sobic002G272100--Sobic001G368500 Sobic002G272100--Sobic008G050400 Sobic002G272100--Sobic008G039600 Sobic002G272100--Sobic002G351600 Sobic002G272100--Sobic002G267900 Sobic002G272100--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic002G272100--Sobic005G110400
Octagon: transcription factors


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