Gene annotation
| Transcriptome id | Sobic.001G167900.1 |
|---|---|
| Synonym | Sb01g014680 |
| Functional annotation | oxidoreductase, aldo/keto reductase family protein, putative, expressed |
| UniProt | C5WSB9 |
| Pfam | PF00248 |
| Panther DB | PTHR11732 PTHR11732:SF255 |
| NCBI CDD | KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G04420 : NAD(P)-linked oxidoreductase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os03g41510.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a007412 |
| Brachypodium | KQK14204 , KQK14203 , KQK14202 , PNT74445 , PNT74447 , PNT74446 |
| Barley | HORVU4Hr1G013530.10 , HORVU4Hr1G013530.11 , HORVU4Hr1G013530.8 , HORVU4Hr1G013530.9 , HORVU4Hr1G013530.6 , HORVU4Hr1G013530.7 , HORVU4Hr1G013530.4 , HORVU4Hr1G013530.5 , HORVU4Hr1G013530.3 , HORVU4Hr1G013530.1 , HORVU4Hr1G013530.12 |
| Wheat | TraesCS4B02G079400 , TraesCS4D02G078200 , TraesCS4A02G235500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G028300 | expressed protein | - |
| 2 | Sobic.004G124400 | uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed | - |
| 3 | Sobic.004G359600 | cell division inhibitor, putative, expressed | K07071: uncharacterized protein |
| 4 | Sobic.006G063900 | NAD dependent epimerase/dehydratase family protein, putative, expressed | - |
| 5 | Sobic.001G015200 | Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed | - |
| 6 | Sobic.008G088821 | - | K05356: SPS, all-trans-nonaprenyl-diphosphate synthase |
| 7 | Sobic.002G351600 | prenyltransferase, putative, expressed | K12501: homogentisate solanesyltransferase |
| 8 | Sobic.007G166300 | PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed | K00051: malate dehydrogenase (NADP+) |
| 9 | Sobic.007G130400 | FAD dependent oxidoreductase, putative, expressed | - |
| 10 | Sobic.004G154800 | expressed protein | - |
| 11 | Sobic.005G028800 | astaxanthin synthase KC28, putative, expressed | - |
| 12 | Sobic.004G305900 | heat shock protein DnaJ, putative, expressed | - |
| 13 | Sobic.006G140500 | photosystem-II repair protein, putative, expressed | - |
| 14 | Sobic.002G061900 | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed | - |
| 15 | Sobic.006G108200 | expressed protein | - |
| 16 | Sobic.007G173800 | uncharacterized protein ycf39, putative, expressed | - |
| 17 | Sobic.001G436400 | immature colon carcinoma transcript 1 protein precursor, putative, expressed | K15033: peptidyl-tRNA hydrolase ICT1 |
| 18 | Sobic.006G265900 | thioredoxin, putative, expressed | K03671: thioredoxin 1 |
| 19 | Sobic.004G103300 | Complex I intermediate-associated protein 30 domain containing protein, putative, expressed | - |
| 20 | Sobic.007G113600 | adenylate kinase family protein(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase family protein, putative, expressed | K00939: adk, adenylate kinase |
Gene co-expression network
Octagon: transcription factors
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