Gene annotation
Transcriptome id Sobic.004G154800.3,Sobic.004G154800.2,Sobic.004G154800.4,Sobic.004G154800.5
Synonym Sb04g020600
Functional annotation expressed protein
UniProt A0A1Z5RMT8 , C5XSL3
Pfam PF04359
Panther DB PTHR34782 PTHR34782:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27385 : -
RAP-DB (Rice) LOC_Os04g31690.1,LOC_Os02g30410.2,LOC_Os02g30410.1 : expressed protein
MaizeGDB (Corn) Zm00025a055890 , Zm00025a011782
Brachypodium -
Barley -
Wheat -
Populus PNT46097 , PNT46096


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G055000 peptidase, cysteine peptidase active site, putative, expressed -
2 Sobic.003G275200 methyltransferase domain containing protein, expressed -
3 Sobic.001G167900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.006G108200 expressed protein -
5 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
6 Sobic.004G028300 expressed protein -
7 Sobic.001G220000 PPR repeat containing protein, expressed -
8 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
9 Sobic.010G062500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
10 Sobic.009G123300 NAD dependent epimerase/dehydratase family protein, putative, expressed K06118: SQD1, UDP-sulfoquinovose synthase
11 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
12 Sobic.006G063900 NAD dependent epimerase/dehydratase family protein, putative, expressed -
13 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
14 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
15 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
16 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
17 Sobic.002G061900 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
18 Sobic.004G305900 heat shock protein DnaJ, putative, expressed -
19 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
20 Sobic.001G118400 expressed protein -


Gene co-expression network
sample Sobic004G154800 Sobic004G154800 Sobic004G055000 Sobic004G055000 Sobic004G154800--Sobic004G055000 Sobic003G275200 Sobic003G275200 Sobic004G154800--Sobic003G275200 Sobic001G167900 Sobic001G167900 Sobic004G154800--Sobic001G167900 Sobic006G108200 Sobic006G108200 Sobic004G154800--Sobic006G108200 Sobic004G124400 Sobic004G124400 Sobic004G154800--Sobic004G124400 Sobic004G028300 Sobic004G028300 Sobic004G154800--Sobic004G028300 Sobic001G220000 Sobic001G220000 Sobic004G154800--Sobic001G220000 Sobic002G351600 Sobic002G351600 Sobic004G154800--Sobic002G351600 Sobic010G062500 Sobic010G062500 Sobic004G154800--Sobic010G062500 Sobic004G055000--Sobic003G275200 Sobic004G055000--Sobic004G154800 Sobic008G172700 Sobic008G172700 Sobic004G055000--Sobic008G172700 Sobic002G267900 Sobic002G267900 Sobic004G055000--Sobic002G267900 Sobic009G131800 Sobic009G131800 Sobic004G055000--Sobic009G131800 Sobic004G326500 Sobic004G326500 Sobic004G055000--Sobic004G326500 Sobic004G055000--Sobic002G351600 Sobic004G055000--Sobic006G108200 Sobic002G272100 Sobic002G272100 Sobic004G055000--Sobic002G272100 Sobic003G275200--Sobic004G055000 Sobic003G275200--Sobic006G108200 Sobic003G275200--Sobic004G326500 Sobic003G275200--Sobic004G154800 Sobic003G275200--Sobic008G172700 Sobic003G275200--Sobic002G351600 Sobic001G350000 Sobic001G350000 Sobic003G275200--Sobic001G350000 Sobic008G039600 Sobic008G039600 Sobic003G275200--Sobic008G039600 Sobic003G275200--Sobic002G272100 Sobic001G167900--Sobic004G028300 Sobic001G167900--Sobic004G124400 Sobic004G359600 Sobic004G359600 Sobic001G167900--Sobic004G359600 Sobic006G063900 Sobic006G063900 Sobic001G167900--Sobic006G063900 Sobic001G015200 Sobic001G015200 Sobic001G167900--Sobic001G015200 Sobic008G088821 Sobic008G088821 Sobic001G167900--Sobic008G088821 Sobic001G167900--Sobic002G351600 Sobic007G166300 Sobic007G166300 Sobic001G167900--Sobic007G166300 Sobic007G130400 Sobic007G130400 Sobic001G167900--Sobic007G130400 Sobic006G108200--Sobic003G275200 Sobic006G108200--Sobic002G351600 Sobic006G108200--Sobic004G055000 Sobic006G108200--Sobic004G028300 Sobic006G108200--Sobic004G154800 Sobic002G200900 Sobic002G200900 Sobic006G108200--Sobic002G200900 Sobic006G108200--Sobic001G220000 Sobic006G108200--Sobic001G167900 Sobic005G134100 Sobic005G134100 Sobic006G108200--Sobic005G134100 Sobic005G028800 Sobic005G028800 Sobic004G124400--Sobic005G028800 Sobic004G124400--Sobic006G063900 Sobic004G124400--Sobic007G166300 Sobic004G124400--Sobic001G167900 Sobic010G231500 Sobic010G231500 Sobic004G124400--Sobic010G231500 Sobic002G061900 Sobic002G061900 Sobic004G124400--Sobic002G061900 Sobic006G097500 Sobic006G097500 Sobic004G124400--Sobic006G097500 Sobic001G436400 Sobic001G436400 Sobic004G124400--Sobic001G436400 Sobic004G124400--Sobic004G359600 Sobic004G028300--Sobic008G088821 Sobic004G028300--Sobic001G167900 Sobic006G140500 Sobic006G140500 Sobic004G028300--Sobic006G140500 Sobic004G028300--Sobic006G063900 Sobic004G028300--Sobic001G015200 Sobic004G028300--Sobic005G134100 Sobic003G419900 Sobic003G419900 Sobic004G028300--Sobic003G419900 Sobic004G028300--Sobic004G359600 Sobic004G028300--Sobic006G108200 Sobic001G220000--Sobic004G124400 Sobic004G317700 Sobic004G317700 Sobic001G220000--Sobic004G317700 Sobic004G300100 Sobic004G300100 Sobic001G220000--Sobic004G300100 Sobic001G220000--Sobic006G108200 Sobic002G356900 Sobic002G356900 Sobic001G220000--Sobic002G356900 Sobic001G220000--Sobic010G231500 Sobic001G220000--Sobic001G436400 Sobic001G220000--Sobic004G154800 Sobic001G220000--Sobic002G351600 Sobic008G050400 Sobic008G050400 Sobic002G351600--Sobic008G050400 Sobic002G351600--Sobic002G272100 Sobic002G351600--Sobic001G167900 Sobic002G401800 Sobic002G401800 Sobic002G351600--Sobic002G401800 Sobic002G351600--Sobic008G172700 Sobic002G351600--Sobic006G108200 Sobic002G351600--Sobic004G055000 Sobic002G351600--Sobic004G124400 Sobic002G351600--Sobic003G275200 Sobic010G062500--Sobic004G154800 Sobic004G252500 Sobic004G252500 Sobic010G062500--Sobic004G252500 Sobic008G037800 Sobic008G037800 Sobic010G062500--Sobic008G037800 Sobic004G165900 Sobic004G165900 Sobic010G062500--Sobic004G165900 Sobic002G230600 Sobic002G230600 Sobic010G062500--Sobic002G230600 Sobic006G025400 Sobic006G025400 Sobic010G062500--Sobic006G025400 Sobic010G207100 Sobic010G207100 Sobic010G062500--Sobic010G207100 Sobic010G062500--Sobic004G300100 Sobic010G062500--Sobic004G124400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.