Gene annotation
Transcriptome id Sobic.004G028300.1
Synonym Sb04g002490
Functional annotation expressed protein
UniProt C5XTT6
Pfam PF07819
Panther DB PTHR15495 PTHR15495:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds GO:0006886intracellular protein transport GO:0006505GPI anchor metabolic process


Orthologs (automatic annotation)
TAIR AT5G17670 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g03720.1 : expressed protein
MaizeGDB (Corn) Zm00025a014265 , Zm00025a034992 , Zm00025a043174 , Zm00025a023950 , Zm00025a053750
Brachypodium PNT65797 , PNT65799 , PNT65798
Barley HORVU6Hr1G015430.3 , HORVU6Hr1G015430.8 , HORVU6Hr1G015430.2 , HORVU6Hr1G015430.1 , HORVU6Hr1G015430.7 , HORVU6Hr1G015430.6 , HORVU6Hr1G015430.5 , HORVU6Hr1G015430.4
Wheat TraesCS6B02G117000 , TraesCS6A02G084900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
2 Sobic.001G167900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.006G140500 photosystem-II repair protein, putative, expressed -
4 Sobic.006G063900 NAD dependent epimerase/dehydratase family protein, putative, expressed -
5 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
6 Sobic.005G134100 rubredoxin family protein, putative, expressed -
7 Sobic.003G419900 photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed K08903: photosystem II 13kDa protein
8 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
9 Sobic.006G108200 expressed protein -
10 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
11 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
12 Sobic.007G181400 TraB family protein, putative, expressed -
13 Sobic.004G305900 heat shock protein DnaJ, putative, expressed -
14 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
15 Sobic.006G235350 - -
16 Sobic.004G154800 expressed protein -
17 Sobic.001G029600 -(PubMedID : 26465154)@expressed protein -
18 Sobic.007G173800 uncharacterized protein ycf39, putative, expressed -
19 Sobic.007G130400 FAD dependent oxidoreductase, putative, expressed -
20 Sobic.007G166300 PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)


Gene co-expression network
sample Sobic004G028300 Sobic004G028300 Sobic008G088821 Sobic008G088821 Sobic004G028300--Sobic008G088821 Sobic001G167900 Sobic001G167900 Sobic004G028300--Sobic001G167900 Sobic006G140500 Sobic006G140500 Sobic004G028300--Sobic006G140500 Sobic006G063900 Sobic006G063900 Sobic004G028300--Sobic006G063900 Sobic001G015200 Sobic001G015200 Sobic004G028300--Sobic001G015200 Sobic005G134100 Sobic005G134100 Sobic004G028300--Sobic005G134100 Sobic003G419900 Sobic003G419900 Sobic004G028300--Sobic003G419900 Sobic004G359600 Sobic004G359600 Sobic004G028300--Sobic004G359600 Sobic006G108200 Sobic006G108200 Sobic004G028300--Sobic006G108200 Sobic008G088821--Sobic001G015200 Sobic008G088821--Sobic006G140500 Sobic008G088821--Sobic004G028300 Sobic009G119300 Sobic009G119300 Sobic008G088821--Sobic009G119300 Sobic003G103300 Sobic003G103300 Sobic008G088821--Sobic003G103300 Sobic001G018000 Sobic001G018000 Sobic008G088821--Sobic001G018000 Sobic004G268400 Sobic004G268400 Sobic008G088821--Sobic004G268400 Sobic010G101000 Sobic010G101000 Sobic008G088821--Sobic010G101000 Sobic002G030900 Sobic002G030900 Sobic008G088821--Sobic002G030900 Sobic001G167900--Sobic004G028300 Sobic004G124400 Sobic004G124400 Sobic001G167900--Sobic004G124400 Sobic001G167900--Sobic004G359600 Sobic001G167900--Sobic006G063900 Sobic001G167900--Sobic001G015200 Sobic001G167900--Sobic008G088821 Sobic002G351600 Sobic002G351600 Sobic001G167900--Sobic002G351600 Sobic007G166300 Sobic007G166300 Sobic001G167900--Sobic007G166300 Sobic007G130400 Sobic007G130400 Sobic001G167900--Sobic007G130400 Sobic006G140500--Sobic008G088821 Sobic006G235350 Sobic006G235350 Sobic006G140500--Sobic006G235350 Sobic006G140500--Sobic001G015200 Sobic001G029600 Sobic001G029600 Sobic006G140500--Sobic001G029600 Sobic006G140500--Sobic009G119300 Sobic006G140500--Sobic004G028300 Sobic004G202200 Sobic004G202200 Sobic006G140500--Sobic004G202200 Sobic005G028800 Sobic005G028800 Sobic006G140500--Sobic005G028800 Sobic006G140500--Sobic007G166300 Sobic006G063900--Sobic004G124400 Sobic006G063900--Sobic001G167900 Sobic006G063900--Sobic005G028800 Sobic006G063900--Sobic004G028300 Sobic006G063900--Sobic007G166300 Sobic006G063900--Sobic006G235350 Sobic006G063900--Sobic006G140500 Sobic006G063900--Sobic001G015200 Sobic007G169100 Sobic007G169100 Sobic006G063900--Sobic007G169100 Sobic001G015200--Sobic008G088821 Sobic001G015200--Sobic007G166300 Sobic001G015200--Sobic003G103300 Sobic001G015200--Sobic006G140500 Sobic002G047400 Sobic002G047400 Sobic001G015200--Sobic002G047400 Sobic001G509200 Sobic001G509200 Sobic001G015200--Sobic001G509200 Sobic001G393300 Sobic001G393300 Sobic001G015200--Sobic001G393300 Sobic001G015200--Sobic009G119300 Sobic001G015200--Sobic010G101000 Sobic005G134100--Sobic004G028300 Sobic005G134100--Sobic008G088821 Sobic005G134100--Sobic006G108200 Sobic005G134100--Sobic006G140500 Sobic005G134100--Sobic001G015200 Sobic005G134100--Sobic001G167900 Sobic005G062700 Sobic005G062700 Sobic005G134100--Sobic005G062700 Sobic005G134100--Sobic002G047400 Sobic004G317700 Sobic004G317700 Sobic005G134100--Sobic004G317700 Sobic007G181400 Sobic007G181400 Sobic003G419900--Sobic007G181400 Sobic004G353100 Sobic004G353100 Sobic003G419900--Sobic004G353100 Sobic003G419900--Sobic004G359600 Sobic003G419900--Sobic004G202200 Sobic002G233700 Sobic002G233700 Sobic003G419900--Sobic002G233700 Sobic003G419900--Sobic006G140500 Sobic003G419900--Sobic004G028300 Sobic001G289500 Sobic001G289500 Sobic003G419900--Sobic001G289500 Sobic003G419900--Sobic001G015200 Sobic007G173800 Sobic007G173800 Sobic004G359600--Sobic007G173800 Sobic004G359600--Sobic001G167900 Sobic008G102000 Sobic008G102000 Sobic004G359600--Sobic008G102000 Sobic004G359600--Sobic007G181400 Sobic003G378600 Sobic003G378600 Sobic004G359600--Sobic003G378600 Sobic006G265900 Sobic006G265900 Sobic004G359600--Sobic006G265900 Sobic001G005200 Sobic001G005200 Sobic004G359600--Sobic001G005200 Sobic008G172700 Sobic008G172700 Sobic004G359600--Sobic008G172700 Sobic009G140600 Sobic009G140600 Sobic004G359600--Sobic009G140600 Sobic003G275200 Sobic003G275200 Sobic006G108200--Sobic003G275200 Sobic006G108200--Sobic002G351600 Sobic004G055000 Sobic004G055000 Sobic006G108200--Sobic004G055000 Sobic006G108200--Sobic004G028300 Sobic004G154800 Sobic004G154800 Sobic006G108200--Sobic004G154800 Sobic002G200900 Sobic002G200900 Sobic006G108200--Sobic002G200900 Sobic001G220000 Sobic001G220000 Sobic006G108200--Sobic001G220000 Sobic006G108200--Sobic001G167900 Sobic006G108200--Sobic005G134100
Octagon: transcription factors


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