Gene annotation
Transcriptome id Sobic.007G173800.1
Synonym Sb07g024590
Functional annotation uncharacterized protein ycf39, putative, expressed
UniProt C5YNB9
Pfam PF05368
Panther DB PTHR14194 PTHR14194:SF81
NCBI CDD KOG1203; Predicted dehydrogenase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35250 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os08g44000.1 : uncharacterized protein ycf39, putative, expressed
MaizeGDB (Corn) Zm00025a005654
Brachypodium KQJ99314
Barley -
Wheat TraesCS7B02G173700 , TraesCS7D02G275900 , TraesCS7A02G276000
Populus PNT41935 , PNT41934 , PNT41937 , PNT41936


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cDNA sequences
Sobic.007G173800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
2 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
3 Sobic.007G225500 expressed protein -
4 Sobic.009G043000 thioredoxin, putative, expressed -
5 Sobic.010G277600 - -
6 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
7 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
8 Sobic.002G277100 -(PubMedID : 29017446)@triosephosphate isomerase, chloroplast precursor, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
9 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
11 Sobic.010G201700 GA16396-PA, putative, expressed -
12 Sobic.001G100000 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
13 Sobic.007G052400 rubredoxin family protein, putative, expressed -
14 Sobic.002G051100 Probable ribose-5-phosphate isomerase(PubMedID : 26186930)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
15 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
17 Sobic.001G167900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.010G035400 expressed protein -
19 Sobic.005G200200 expressed protein -
20 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -


Gene co-expression network
sample Sobic007G173800 Sobic007G173800 Sobic008G102000 Sobic008G102000 Sobic007G173800--Sobic008G102000 Sobic004G359600 Sobic004G359600 Sobic007G173800--Sobic004G359600 Sobic007G225500 Sobic007G225500 Sobic007G173800--Sobic007G225500 Sobic009G043000 Sobic009G043000 Sobic007G173800--Sobic009G043000 Sobic010G277600 Sobic010G277600 Sobic007G173800--Sobic010G277600 Sobic003G002300 Sobic003G002300 Sobic007G173800--Sobic003G002300 Sobic009G183700 Sobic009G183700 Sobic007G173800--Sobic009G183700 Sobic002G277100 Sobic002G277100 Sobic007G173800--Sobic002G277100 Sobic006G238200 Sobic006G238200 Sobic007G173800--Sobic006G238200 Sobic008G102000--Sobic003G002300 Sobic009G140600 Sobic009G140600 Sobic008G102000--Sobic009G140600 Sobic008G102000--Sobic009G043000 Sobic008G102000--Sobic007G225500 Sobic002G051100 Sobic002G051100 Sobic008G102000--Sobic002G051100 Sobic004G272100 Sobic004G272100 Sobic008G102000--Sobic004G272100 Sobic008G102000--Sobic007G173800 Sobic007G052400 Sobic007G052400 Sobic008G102000--Sobic007G052400 Sobic003G378600 Sobic003G378600 Sobic008G102000--Sobic003G378600 Sobic004G359600--Sobic007G173800 Sobic001G167900 Sobic001G167900 Sobic004G359600--Sobic001G167900 Sobic004G359600--Sobic008G102000 Sobic007G181400 Sobic007G181400 Sobic004G359600--Sobic007G181400 Sobic004G359600--Sobic003G378600 Sobic006G265900 Sobic006G265900 Sobic004G359600--Sobic006G265900 Sobic001G005200 Sobic001G005200 Sobic004G359600--Sobic001G005200 Sobic008G172700 Sobic008G172700 Sobic004G359600--Sobic008G172700 Sobic004G359600--Sobic009G140600 Sobic007G225500--Sobic003G002300 Sobic010G035400 Sobic010G035400 Sobic007G225500--Sobic010G035400 Sobic007G225500--Sobic008G102000 Sobic007G225500--Sobic007G052400 Sobic008G171300 Sobic008G171300 Sobic007G225500--Sobic008G171300 Sobic007G225500--Sobic009G043000 Sobic002G275300 Sobic002G275300 Sobic007G225500--Sobic002G275300 Sobic006G077400 Sobic006G077400 Sobic007G225500--Sobic006G077400 Sobic010G201700 Sobic010G201700 Sobic007G225500--Sobic010G201700 Sobic009G043000--Sobic010G201700 Sobic009G043000--Sobic003G002300 Sobic009G043000--Sobic008G102000 Sobic001G102800 Sobic001G102800 Sobic009G043000--Sobic001G102800 Sobic009G043000--Sobic007G225500 Sobic009G043000--Sobic004G272100 Sobic006G207800 Sobic006G207800 Sobic009G043000--Sobic006G207800 Sobic009G043000--Sobic009G140600 Sobic001G519800 Sobic001G519800 Sobic009G043000--Sobic001G519800 Sobic010G277600--Sobic009G183700 Sobic009G030900 Sobic009G030900 Sobic010G277600--Sobic009G030900 Sobic010G005500 Sobic010G005500 Sobic010G277600--Sobic010G005500 Sobic010G277600--Sobic007G052400 Sobic004G239100 Sobic004G239100 Sobic010G277600--Sobic004G239100 Sobic004G012900 Sobic004G012900 Sobic010G277600--Sobic004G012900 Sobic010G277600--Sobic002G277100 Sobic007G004600 Sobic007G004600 Sobic010G277600--Sobic007G004600 Sobic010G277600--Sobic007G173800 Sobic003G002300--Sobic007G052400 Sobic003G002300--Sobic007G225500 Sobic003G002300--Sobic009G140600 Sobic003G002300--Sobic009G043000 Sobic003G002300--Sobic008G102000 Sobic003G002300--Sobic002G051100 Sobic003G002300--Sobic010G201700 Sobic003G002300--Sobic001G519800 Sobic003G002300--Sobic010G005500 Sobic009G183700--Sobic010G277600 Sobic009G183700--Sobic002G277100 Sobic009G183700--Sobic010G005500 Sobic009G183700--Sobic003G002300 Sobic009G183700--Sobic007G052400 Sobic009G183700--Sobic007G004600 Sobic009G183700--Sobic009G030900 Sobic003G387800 Sobic003G387800 Sobic009G183700--Sobic003G387800 Sobic009G183700--Sobic009G140600 Sobic002G277100--Sobic009G183700 Sobic002G277100--Sobic010G005500 Sobic002G277100--Sobic010G277600 Sobic002G277100--Sobic003G002300 Sobic002G277100--Sobic007G052400 Sobic002G277100--Sobic007G225500 Sobic002G277100--Sobic009G030900 Sobic002G277100--Sobic007G173800 Sobic002G277100--Sobic009G043000 Sobic001G491000 Sobic001G491000 Sobic006G238200--Sobic001G491000 Sobic006G238200--Sobic002G275300 Sobic010G181300 Sobic010G181300 Sobic006G238200--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic006G238200--Sobic001G100000 Sobic009G237100 Sobic009G237100 Sobic006G238200--Sobic009G237100 Sobic003G398800 Sobic003G398800 Sobic006G238200--Sobic003G398800 Sobic001G289500 Sobic001G289500 Sobic006G238200--Sobic001G289500 Sobic002G370600 Sobic002G370600 Sobic006G238200--Sobic002G370600 Sobic006G238200--Sobic007G225500
Octagon: transcription factors


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