Gene annotation
Transcriptome id Sobic.006G108200.2,Sobic.006G108200.3
Synonym Sb06g019080
Functional annotation expressed protein
UniProt A0A1Z5RE46 , A0A1Z5REA3
Pfam -
Panther DB PTHR36367
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25805 : -
RAP-DB (Rice) LOC_Os04g38850.1 : expressed protein
MaizeGDB (Corn) Zm00025a011108
Brachypodium KQJ82992
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G108200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G275200 methyltransferase domain containing protein, expressed -
2 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
3 Sobic.004G055000 peptidase, cysteine peptidase active site, putative, expressed -
4 Sobic.004G028300 expressed protein -
5 Sobic.004G154800 expressed protein -
6 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
7 Sobic.001G220000 PPR repeat containing protein, expressed -
8 Sobic.001G167900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
9 Sobic.005G134100 rubredoxin family protein, putative, expressed -
10 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
11 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
12 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
13 Sobic.006G063900 NAD dependent epimerase/dehydratase family protein, putative, expressed -
14 Sobic.003G419900 photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed K08903: photosystem II 13kDa protein
15 Sobic.001G350000 expressed protein -
16 Sobic.008G050400 5-formyltetrahydrofolate cyclo-ligase, putative, expressed -
17 Sobic.007G130400 FAD dependent oxidoreductase, putative, expressed -
18 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
19 Sobic.002G272100 expressed protein -
20 Sobic.004G326500 PAP fibrillin family domain containing protein, expressed -


Gene co-expression network
sample Sobic006G108200 Sobic006G108200 Sobic003G275200 Sobic003G275200 Sobic006G108200--Sobic003G275200 Sobic002G351600 Sobic002G351600 Sobic006G108200--Sobic002G351600 Sobic004G055000 Sobic004G055000 Sobic006G108200--Sobic004G055000 Sobic004G028300 Sobic004G028300 Sobic006G108200--Sobic004G028300 Sobic004G154800 Sobic004G154800 Sobic006G108200--Sobic004G154800 Sobic002G200900 Sobic002G200900 Sobic006G108200--Sobic002G200900 Sobic001G220000 Sobic001G220000 Sobic006G108200--Sobic001G220000 Sobic001G167900 Sobic001G167900 Sobic006G108200--Sobic001G167900 Sobic005G134100 Sobic005G134100 Sobic006G108200--Sobic005G134100 Sobic003G275200--Sobic004G055000 Sobic003G275200--Sobic006G108200 Sobic004G326500 Sobic004G326500 Sobic003G275200--Sobic004G326500 Sobic003G275200--Sobic004G154800 Sobic008G172700 Sobic008G172700 Sobic003G275200--Sobic008G172700 Sobic003G275200--Sobic002G351600 Sobic001G350000 Sobic001G350000 Sobic003G275200--Sobic001G350000 Sobic008G039600 Sobic008G039600 Sobic003G275200--Sobic008G039600 Sobic002G272100 Sobic002G272100 Sobic003G275200--Sobic002G272100 Sobic008G050400 Sobic008G050400 Sobic002G351600--Sobic008G050400 Sobic002G351600--Sobic002G272100 Sobic002G351600--Sobic001G167900 Sobic002G401800 Sobic002G401800 Sobic002G351600--Sobic002G401800 Sobic002G351600--Sobic008G172700 Sobic002G351600--Sobic006G108200 Sobic002G351600--Sobic004G055000 Sobic004G124400 Sobic004G124400 Sobic002G351600--Sobic004G124400 Sobic002G351600--Sobic003G275200 Sobic004G055000--Sobic003G275200 Sobic004G055000--Sobic004G154800 Sobic004G055000--Sobic008G172700 Sobic002G267900 Sobic002G267900 Sobic004G055000--Sobic002G267900 Sobic009G131800 Sobic009G131800 Sobic004G055000--Sobic009G131800 Sobic004G055000--Sobic004G326500 Sobic004G055000--Sobic002G351600 Sobic004G055000--Sobic006G108200 Sobic004G055000--Sobic002G272100 Sobic008G088821 Sobic008G088821 Sobic004G028300--Sobic008G088821 Sobic004G028300--Sobic001G167900 Sobic006G140500 Sobic006G140500 Sobic004G028300--Sobic006G140500 Sobic006G063900 Sobic006G063900 Sobic004G028300--Sobic006G063900 Sobic001G015200 Sobic001G015200 Sobic004G028300--Sobic001G015200 Sobic004G028300--Sobic005G134100 Sobic003G419900 Sobic003G419900 Sobic004G028300--Sobic003G419900 Sobic004G359600 Sobic004G359600 Sobic004G028300--Sobic004G359600 Sobic004G028300--Sobic006G108200 Sobic004G154800--Sobic004G055000 Sobic004G154800--Sobic003G275200 Sobic004G154800--Sobic001G167900 Sobic004G154800--Sobic006G108200 Sobic004G154800--Sobic004G124400 Sobic004G154800--Sobic004G028300 Sobic004G154800--Sobic001G220000 Sobic004G154800--Sobic002G351600 Sobic010G062500 Sobic010G062500 Sobic004G154800--Sobic010G062500 Sobic002G200900--Sobic006G108200 Sobic004G281900 Sobic004G281900 Sobic002G200900--Sobic004G281900 Sobic002G200900--Sobic002G351600 Sobic002G200900--Sobic001G220000 Sobic002G200900--Sobic004G055000 Sobic002G200900--Sobic003G275200 Sobic006G155500 Sobic006G155500 Sobic002G200900--Sobic006G155500 Sobic006G050400 Sobic006G050400 Sobic002G200900--Sobic006G050400 Sobic002G159100 Sobic002G159100 Sobic002G200900--Sobic002G159100 Sobic001G220000--Sobic004G124400 Sobic004G317700 Sobic004G317700 Sobic001G220000--Sobic004G317700 Sobic004G300100 Sobic004G300100 Sobic001G220000--Sobic004G300100 Sobic001G220000--Sobic006G108200 Sobic002G356900 Sobic002G356900 Sobic001G220000--Sobic002G356900 Sobic010G231500 Sobic010G231500 Sobic001G220000--Sobic010G231500 Sobic001G436400 Sobic001G436400 Sobic001G220000--Sobic001G436400 Sobic001G220000--Sobic004G154800 Sobic001G220000--Sobic002G351600 Sobic001G167900--Sobic004G028300 Sobic001G167900--Sobic004G124400 Sobic001G167900--Sobic004G359600 Sobic001G167900--Sobic006G063900 Sobic001G167900--Sobic001G015200 Sobic001G167900--Sobic008G088821 Sobic001G167900--Sobic002G351600 Sobic007G166300 Sobic007G166300 Sobic001G167900--Sobic007G166300 Sobic007G130400 Sobic007G130400 Sobic001G167900--Sobic007G130400 Sobic005G134100--Sobic004G028300 Sobic005G134100--Sobic008G088821 Sobic005G134100--Sobic006G108200 Sobic005G134100--Sobic006G140500 Sobic005G134100--Sobic001G015200 Sobic005G134100--Sobic001G167900 Sobic005G062700 Sobic005G062700 Sobic005G134100--Sobic005G062700 Sobic002G047400 Sobic002G047400 Sobic005G134100--Sobic002G047400 Sobic005G134100--Sobic004G317700
Octagon: transcription factors


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