Gene annotation
Transcriptome id Sobic.008G172700.1
Synonym DEG5, DEGP5, HHOA, Sb08g021740
Functional annotation OsDegp15 - Putative Deg protease homologue, expressed
UniProt C5YSC3
Pfam PF00089
Panther DB PTHR22939 PTHR22939:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004252serine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT4G18370 : DEGP protease 5
RAP-DB (Rice) LOC_Os12g42210.1 : OsDegp15 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) Zm00025a004713
Brachypodium KQJ85757 , KQJ85758
Barley HORVU5Hr1G008160.8 , HORVU5Hr1G008160.4 , HORVU5Hr1G008160.5 , HORVU5Hr1G008160.6 , HORVU5Hr1G008160.7 , HORVU5Hr1G008160.1 , HORVU5Hr1G008160.2 , HORVU5Hr1G008160.3
Wheat TraesCS5D02G039300 , TraesCS5B02G030700 , TraesCS5A02G031100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G267900 expressed protein -
2 Sobic.001G350000 expressed protein -
3 Sobic.004G239100 -(PubMedID : 26465154)@expressed protein -
4 Sobic.004G055000 peptidase, cysteine peptidase active site, putative, expressed -
5 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
6 Sobic.010G277600 - -
7 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
8 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
9 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
10 Sobic.004G012900 expressed protein -
11 Sobic.002G272100 expressed protein -
12 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
13 Sobic.003G275200 methyltransferase domain containing protein, expressed -
14 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.005G194100 expressed protein -
16 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
17 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
18 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
19 Sobic.007G052400 rubredoxin family protein, putative, expressed -
20 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase


Gene co-expression network
sample Sobic008G172700 Sobic008G172700 Sobic002G267900 Sobic002G267900 Sobic008G172700--Sobic002G267900 Sobic001G350000 Sobic001G350000 Sobic008G172700--Sobic001G350000 Sobic004G239100 Sobic004G239100 Sobic008G172700--Sobic004G239100 Sobic004G055000 Sobic004G055000 Sobic008G172700--Sobic004G055000 Sobic003G378600 Sobic003G378600 Sobic008G172700--Sobic003G378600 Sobic010G277600 Sobic010G277600 Sobic008G172700--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic008G172700--Sobic009G183700 Sobic008G171300 Sobic008G171300 Sobic008G172700--Sobic008G171300 Sobic004G359600 Sobic004G359600 Sobic008G172700--Sobic004G359600 Sobic002G267900--Sobic008G172700 Sobic002G267900--Sobic004G055000 Sobic002G272100 Sobic002G272100 Sobic002G267900--Sobic002G272100 Sobic002G267900--Sobic010G277600 Sobic002G267900--Sobic009G183700 Sobic004G326500 Sobic004G326500 Sobic002G267900--Sobic004G326500 Sobic002G401800 Sobic002G401800 Sobic002G267900--Sobic002G401800 Sobic008G119300 Sobic008G119300 Sobic002G267900--Sobic008G119300 Sobic002G198000 Sobic002G198000 Sobic002G267900--Sobic002G198000 Sobic001G350000--Sobic008G172700 Sobic003G275200 Sobic003G275200 Sobic001G350000--Sobic003G275200 Sobic002G351600 Sobic002G351600 Sobic001G350000--Sobic002G351600 Sobic001G350000--Sobic004G359600 Sobic001G350000--Sobic004G239100 Sobic001G350000--Sobic002G272100 Sobic001G350000--Sobic004G055000 Sobic001G350000--Sobic008G171300 Sobic001G350000--Sobic002G267900 Sobic004G239100--Sobic010G277600 Sobic004G239100--Sobic009G183700 Sobic004G239100--Sobic008G172700 Sobic005G194100 Sobic005G194100 Sobic004G239100--Sobic005G194100 Sobic004G239100--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic004G239100--Sobic008G102000 Sobic009G030900 Sobic009G030900 Sobic004G239100--Sobic009G030900 Sobic009G140600 Sobic009G140600 Sobic004G239100--Sobic009G140600 Sobic002G198600 Sobic002G198600 Sobic004G239100--Sobic002G198600 Sobic004G055000--Sobic003G275200 Sobic004G154800 Sobic004G154800 Sobic004G055000--Sobic004G154800 Sobic004G055000--Sobic008G172700 Sobic004G055000--Sobic002G267900 Sobic009G131800 Sobic009G131800 Sobic004G055000--Sobic009G131800 Sobic004G055000--Sobic004G326500 Sobic004G055000--Sobic002G351600 Sobic006G108200 Sobic006G108200 Sobic004G055000--Sobic006G108200 Sobic004G055000--Sobic002G272100 Sobic003G378600--Sobic009G140600 Sobic001G005200 Sobic001G005200 Sobic003G378600--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic003G378600--Sobic004G012900 Sobic003G378600--Sobic008G102000 Sobic001G122300 Sobic001G122300 Sobic003G378600--Sobic001G122300 Sobic003G378600--Sobic004G239100 Sobic003G378600--Sobic004G359600 Sobic002G233700 Sobic002G233700 Sobic003G378600--Sobic002G233700 Sobic003G378600--Sobic008G172700 Sobic010G277600--Sobic009G183700 Sobic010G277600--Sobic009G030900 Sobic010G005500 Sobic010G005500 Sobic010G277600--Sobic010G005500 Sobic007G052400 Sobic007G052400 Sobic010G277600--Sobic007G052400 Sobic010G277600--Sobic004G239100 Sobic010G277600--Sobic004G012900 Sobic002G277100 Sobic002G277100 Sobic010G277600--Sobic002G277100 Sobic007G004600 Sobic007G004600 Sobic010G277600--Sobic007G004600 Sobic007G173800 Sobic007G173800 Sobic010G277600--Sobic007G173800 Sobic009G183700--Sobic010G277600 Sobic009G183700--Sobic002G277100 Sobic009G183700--Sobic010G005500 Sobic003G002300 Sobic003G002300 Sobic009G183700--Sobic003G002300 Sobic009G183700--Sobic007G052400 Sobic009G183700--Sobic007G004600 Sobic009G183700--Sobic009G030900 Sobic003G387800 Sobic003G387800 Sobic009G183700--Sobic003G387800 Sobic009G183700--Sobic009G140600 Sobic008G171300--Sobic002G233700 Sobic008G171300--Sobic007G052400 Sobic007G225500 Sobic007G225500 Sobic008G171300--Sobic007G225500 Sobic008G171300--Sobic003G002300 Sobic008G171300--Sobic008G102000 Sobic009G059300 Sobic009G059300 Sobic008G171300--Sobic009G059300 Sobic008G171300--Sobic004G012900 Sobic008G171300--Sobic009G140600 Sobic008G171300--Sobic009G183700 Sobic004G359600--Sobic007G173800 Sobic001G167900 Sobic001G167900 Sobic004G359600--Sobic001G167900 Sobic004G359600--Sobic008G102000 Sobic007G181400 Sobic007G181400 Sobic004G359600--Sobic007G181400 Sobic004G359600--Sobic003G378600 Sobic006G265900 Sobic006G265900 Sobic004G359600--Sobic006G265900 Sobic004G359600--Sobic001G005200 Sobic004G359600--Sobic008G172700 Sobic004G359600--Sobic009G140600
Octagon: transcription factors


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