Gene annotation
Transcriptome id Sobic.003G378600.1
Synonym Sb03g041820
Functional annotation "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor" (PubMedID : 26465154)
NADH dehydrogenase I subunit N, putative, expressed
UniProt A0A1W0W0U6
Pfam PF11909
Panther DB PTHR35515 PTHR35515:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016655; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G58260 : oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor
RAP-DB (Rice) LOC_Os01g66000.1 : NADH dehydrogenase I subunit N, putative, expressed
MaizeGDB (Corn) Zm00025a026559
Brachypodium KQK10900
Barley HORVU3Hr1G091140.2 , HORVU3Hr1G091140.1
Wheat TraesCS3B02G441000 , TraesCS3D02G402500 , TraesCS3A02G407200
Populus -


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cDNA sequences
Sobic.003G378600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.001G005200 expressed protein -
3 Sobic.004G012900 expressed protein -
4 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
5 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
6 Sobic.004G239100 -(PubMedID : 26465154)@expressed protein -
7 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
8 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
9 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
10 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
11 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
12 Sobic.010G245200 expressed protein -
13 Sobic.007G052400 rubredoxin family protein, putative, expressed -
14 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
15 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
16 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
17 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
18 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
19 Sobic.005G194100 expressed protein -
20 Sobic.010G277600 - -


Gene co-expression network
sample Sobic003G378600 Sobic003G378600 Sobic009G140600 Sobic009G140600 Sobic003G378600--Sobic009G140600 Sobic001G005200 Sobic001G005200 Sobic003G378600--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic003G378600--Sobic004G012900 Sobic008G102000 Sobic008G102000 Sobic003G378600--Sobic008G102000 Sobic001G122300 Sobic001G122300 Sobic003G378600--Sobic001G122300 Sobic004G239100 Sobic004G239100 Sobic003G378600--Sobic004G239100 Sobic004G359600 Sobic004G359600 Sobic003G378600--Sobic004G359600 Sobic002G233700 Sobic002G233700 Sobic003G378600--Sobic002G233700 Sobic008G172700 Sobic008G172700 Sobic003G378600--Sobic008G172700 Sobic003G002300 Sobic003G002300 Sobic009G140600--Sobic003G002300 Sobic009G140600--Sobic008G102000 Sobic009G140600--Sobic003G378600 Sobic003G387800 Sobic003G387800 Sobic009G140600--Sobic003G387800 Sobic009G140600--Sobic001G122300 Sobic005G194100 Sobic005G194100 Sobic009G140600--Sobic005G194100 Sobic007G052400 Sobic007G052400 Sobic009G140600--Sobic007G052400 Sobic009G140600--Sobic001G005200 Sobic009G043000 Sobic009G043000 Sobic009G140600--Sobic009G043000 Sobic001G005200--Sobic003G378600 Sobic001G128600 Sobic001G128600 Sobic001G005200--Sobic001G128600 Sobic001G005200--Sobic008G102000 Sobic001G005200--Sobic009G140600 Sobic009G175500 Sobic009G175500 Sobic001G005200--Sobic009G175500 Sobic010G245200 Sobic010G245200 Sobic001G005200--Sobic010G245200 Sobic001G005200--Sobic002G233700 Sobic003G387100 Sobic003G387100 Sobic001G005200--Sobic003G387100 Sobic001G005200--Sobic001G122300 Sobic004G012900--Sobic007G052400 Sobic004G012900--Sobic002G233700 Sobic002G401800 Sobic002G401800 Sobic004G012900--Sobic002G401800 Sobic010G005500 Sobic010G005500 Sobic004G012900--Sobic010G005500 Sobic004G012900--Sobic003G378600 Sobic009G059300 Sobic009G059300 Sobic004G012900--Sobic009G059300 Sobic010G277600 Sobic010G277600 Sobic004G012900--Sobic010G277600 Sobic004G012900--Sobic003G387100 Sobic008G171300 Sobic008G171300 Sobic004G012900--Sobic008G171300 Sobic008G102000--Sobic003G002300 Sobic008G102000--Sobic009G140600 Sobic008G102000--Sobic009G043000 Sobic007G225500 Sobic007G225500 Sobic008G102000--Sobic007G225500 Sobic002G051100 Sobic002G051100 Sobic008G102000--Sobic002G051100 Sobic004G272100 Sobic004G272100 Sobic008G102000--Sobic004G272100 Sobic007G173800 Sobic007G173800 Sobic008G102000--Sobic007G173800 Sobic008G102000--Sobic007G052400 Sobic008G102000--Sobic003G378600 Sobic001G122300--Sobic001G128600 Sobic001G122300--Sobic009G140600 Sobic001G122300--Sobic003G378600 Sobic001G122300--Sobic001G005200 Sobic001G122300--Sobic004G012900 Sobic002G112400 Sobic002G112400 Sobic001G122300--Sobic002G112400 Sobic001G122300--Sobic010G245200 Sobic001G122300--Sobic003G002300 Sobic006G265900 Sobic006G265900 Sobic001G122300--Sobic006G265900 Sobic004G239100--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic004G239100--Sobic009G183700 Sobic004G239100--Sobic008G172700 Sobic004G239100--Sobic005G194100 Sobic004G239100--Sobic003G378600 Sobic004G239100--Sobic008G102000 Sobic009G030900 Sobic009G030900 Sobic004G239100--Sobic009G030900 Sobic004G239100--Sobic009G140600 Sobic002G198600 Sobic002G198600 Sobic004G239100--Sobic002G198600 Sobic004G359600--Sobic007G173800 Sobic001G167900 Sobic001G167900 Sobic004G359600--Sobic001G167900 Sobic004G359600--Sobic008G102000 Sobic007G181400 Sobic007G181400 Sobic004G359600--Sobic007G181400 Sobic004G359600--Sobic003G378600 Sobic004G359600--Sobic006G265900 Sobic004G359600--Sobic001G005200 Sobic004G359600--Sobic008G172700 Sobic004G359600--Sobic009G140600 Sobic002G233700--Sobic008G171300 Sobic002G233700--Sobic004G012900 Sobic004G303200 Sobic004G303200 Sobic002G233700--Sobic004G303200 Sobic002G233700--Sobic007G052400 Sobic002G233700--Sobic007G225500 Sobic002G233700--Sobic001G005200 Sobic002G233700--Sobic003G002300 Sobic002G233700--Sobic002G401800 Sobic002G233700--Sobic003G378600 Sobic002G267900 Sobic002G267900 Sobic008G172700--Sobic002G267900 Sobic001G350000 Sobic001G350000 Sobic008G172700--Sobic001G350000 Sobic008G172700--Sobic004G239100 Sobic004G055000 Sobic004G055000 Sobic008G172700--Sobic004G055000 Sobic008G172700--Sobic003G378600 Sobic008G172700--Sobic010G277600 Sobic008G172700--Sobic009G183700 Sobic008G172700--Sobic008G171300 Sobic008G172700--Sobic004G359600
Octagon: transcription factors


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