Gene annotation
Transcriptome id Sobic.001G122300.2,Sobic.001G122300.1
Synonym Sb01g010750
Functional annotation PAP fibrillin family domain containing protein, expressed
UniProt C5WNS2 , A0A1Z5S5C8
Pfam PF04755
Panther DB PTHR31906 PTHR31906:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26070 : Plastid-lipid associated protein PAP / fibrillin family protein
RAP-DB (Rice) LOC_Os03g49720.1 : PAP fibrillin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007770
Brachypodium KQK13564
Barley HORVU4Hr1G006730.1 , HORVU4Hr1G006730.6 , HORVU4Hr1G006730.7 , HORVU4Hr1G006730.5 , HORVU4Hr1G006730.8
Wheat TraesCS4D02G039200 , TraesCS4A02G272000 , TraesCS4B02G042000
Populus -


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cDNA sequences
Sobic.001G122300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
2 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
4 Sobic.001G005200 expressed protein -
5 Sobic.004G012900 expressed protein -
6 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
7 Sobic.010G245200 expressed protein -
8 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
9 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
10 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
11 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
12 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
13 Sobic.009G043000 thioredoxin, putative, expressed -
14 Sobic.007G052400 rubredoxin family protein, putative, expressed -
15 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
16 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
17 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
18 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
19 Sobic.004G303200 cytochrome b561, putative, expressed K08360: cytochrome b-561
20 Sobic.007G225500 expressed protein -


Gene co-expression network
sample Sobic001G122300 Sobic001G122300 Sobic001G128600 Sobic001G128600 Sobic001G122300--Sobic001G128600 Sobic009G140600 Sobic009G140600 Sobic001G122300--Sobic009G140600 Sobic003G378600 Sobic003G378600 Sobic001G122300--Sobic003G378600 Sobic001G005200 Sobic001G005200 Sobic001G122300--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic001G122300--Sobic004G012900 Sobic002G112400 Sobic002G112400 Sobic001G122300--Sobic002G112400 Sobic010G245200 Sobic010G245200 Sobic001G122300--Sobic010G245200 Sobic003G002300 Sobic003G002300 Sobic001G122300--Sobic003G002300 Sobic006G265900 Sobic006G265900 Sobic001G122300--Sobic006G265900 Sobic001G128600--Sobic002G112400 Sobic001G128600--Sobic006G265900 Sobic008G006100 Sobic008G006100 Sobic001G128600--Sobic008G006100 Sobic001G128600--Sobic001G122300 Sobic001G128600--Sobic001G005200 Sobic005G100300 Sobic005G100300 Sobic001G128600--Sobic005G100300 Sobic002G298800 Sobic002G298800 Sobic001G128600--Sobic002G298800 Sobic009G175500 Sobic009G175500 Sobic001G128600--Sobic009G175500 Sobic006G097500 Sobic006G097500 Sobic001G128600--Sobic006G097500 Sobic009G140600--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic009G140600--Sobic008G102000 Sobic009G140600--Sobic003G378600 Sobic003G387800 Sobic003G387800 Sobic009G140600--Sobic003G387800 Sobic009G140600--Sobic001G122300 Sobic005G194100 Sobic005G194100 Sobic009G140600--Sobic005G194100 Sobic007G052400 Sobic007G052400 Sobic009G140600--Sobic007G052400 Sobic009G140600--Sobic001G005200 Sobic009G043000 Sobic009G043000 Sobic009G140600--Sobic009G043000 Sobic003G378600--Sobic009G140600 Sobic003G378600--Sobic001G005200 Sobic003G378600--Sobic004G012900 Sobic003G378600--Sobic008G102000 Sobic003G378600--Sobic001G122300 Sobic004G239100 Sobic004G239100 Sobic003G378600--Sobic004G239100 Sobic004G359600 Sobic004G359600 Sobic003G378600--Sobic004G359600 Sobic002G233700 Sobic002G233700 Sobic003G378600--Sobic002G233700 Sobic008G172700 Sobic008G172700 Sobic003G378600--Sobic008G172700 Sobic001G005200--Sobic003G378600 Sobic001G005200--Sobic001G128600 Sobic001G005200--Sobic008G102000 Sobic001G005200--Sobic009G140600 Sobic001G005200--Sobic009G175500 Sobic001G005200--Sobic010G245200 Sobic001G005200--Sobic002G233700 Sobic003G387100 Sobic003G387100 Sobic001G005200--Sobic003G387100 Sobic001G005200--Sobic001G122300 Sobic004G012900--Sobic007G052400 Sobic004G012900--Sobic002G233700 Sobic002G401800 Sobic002G401800 Sobic004G012900--Sobic002G401800 Sobic010G005500 Sobic010G005500 Sobic004G012900--Sobic010G005500 Sobic004G012900--Sobic003G378600 Sobic009G059300 Sobic009G059300 Sobic004G012900--Sobic009G059300 Sobic010G277600 Sobic010G277600 Sobic004G012900--Sobic010G277600 Sobic004G012900--Sobic003G387100 Sobic008G171300 Sobic008G171300 Sobic004G012900--Sobic008G171300 Sobic002G112400--Sobic001G128600 Sobic002G112400--Sobic008G006100 Sobic003G160800 Sobic003G160800 Sobic002G112400--Sobic003G160800 Sobic009G062400 Sobic009G062400 Sobic002G112400--Sobic009G062400 Sobic002G112400--Sobic006G265900 Sobic002G112400--Sobic001G122300 Sobic009G056700 Sobic009G056700 Sobic002G112400--Sobic009G056700 Sobic009G237000 Sobic009G237000 Sobic002G112400--Sobic009G237000 Sobic002G112400--Sobic003G387100 Sobic007G053800 Sobic007G053800 Sobic010G245200--Sobic007G053800 Sobic002G370600 Sobic002G370600 Sobic010G245200--Sobic002G370600 Sobic010G245200--Sobic001G005200 Sobic003G431700 Sobic003G431700 Sobic010G245200--Sobic003G431700 Sobic010G245200--Sobic009G140600 Sobic010G245200--Sobic001G122300 Sobic006G188000 Sobic006G188000 Sobic010G245200--Sobic006G188000 Sobic010G245200--Sobic003G378600 Sobic010G245200--Sobic008G102000 Sobic003G002300--Sobic007G052400 Sobic007G225500 Sobic007G225500 Sobic003G002300--Sobic007G225500 Sobic003G002300--Sobic009G140600 Sobic003G002300--Sobic009G043000 Sobic003G002300--Sobic008G102000 Sobic002G051100 Sobic002G051100 Sobic003G002300--Sobic002G051100 Sobic010G201700 Sobic010G201700 Sobic003G002300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic003G002300--Sobic001G519800 Sobic003G002300--Sobic010G005500 Sobic006G265900--Sobic001G128600 Sobic006G265900--Sobic006G097500 Sobic002G061900 Sobic002G061900 Sobic006G265900--Sobic002G061900 Sobic003G148200 Sobic003G148200 Sobic006G265900--Sobic003G148200 Sobic006G265900--Sobic002G298800 Sobic006G265900--Sobic002G112400 Sobic007G169100 Sobic007G169100 Sobic006G265900--Sobic007G169100 Sobic006G265900--Sobic007G053800 Sobic006G265900--Sobic004G359600
Octagon: transcription factors


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