Gene annotation
| Transcriptome id | Sobic.006G063900.1 |
|---|---|
| Synonym | Sb06g015130 |
| Functional annotation | NAD dependent epimerase/dehydratase family protein, putative, expressed |
| UniProt | C5YFF8 |
| Pfam | PF01370 |
| Panther DB | PTHR12126 PTHR12126:SF5 |
| NCBI CDD | KOG4288; Predicted oxidoreductase |
| KEGG Orthology | - |
| Gene Ontology | GO:0003824; catalytic activity |
Orthologs (automatic annotation)
| TAIR | AT1G32220 : NAD(P)-binding Rossmann-fold superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os04g33060.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a011596 |
| Brachypodium | KQJ82405 |
| Barley | HORVU2Hr1G071860.4 , HORVU2Hr1G071860.5 , HORVU2Hr1G071860.2 , HORVU2Hr1G071860.3 , HORVU2Hr1G071860.1 |
| Wheat | TraesCS2B02G306800 , TraesCS2A02G290300 , TraesCS2D02G288200 |
| Populus | - |
JBrowse
| Sobic.006G063900 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G124400 | uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed | - |
| 2 | Sobic.001G167900 | oxidoreductase, aldo/keto reductase family protein, putative, expressed | - |
| 3 | Sobic.005G028800 | astaxanthin synthase KC28, putative, expressed | - |
| 4 | Sobic.004G028300 | expressed protein | - |
| 5 | Sobic.007G166300 | PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed | K00051: malate dehydrogenase (NADP+) |
| 6 | Sobic.006G235350 | - | - |
| 7 | Sobic.006G140500 | photosystem-II repair protein, putative, expressed | - |
| 8 | Sobic.001G015200 | Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed | - |
| 9 | Sobic.007G169100 | glutathione S-transferase, N-terminal domain containing protein, expressed | - |
| 10 | Sobic.004G303200 | cytochrome b561, putative, expressed | K08360: cytochrome b-561 |
| 11 | Sobic.004G103300 | Complex I intermediate-associated protein 30 domain containing protein, putative, expressed | - |
| 12 | Sobic.002G233700 | -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed | K03319: divalent anion:Na+ symporter, DASS family |
| 13 | Sobic.002G061900 | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed | - |
| 14 | Sobic.008G088821 | - | K05356: SPS, all-trans-nonaprenyl-diphosphate synthase |
| 15 | Sobic.007G130400 | FAD dependent oxidoreductase, putative, expressed | - |
| 16 | Sobic.004G359600 | cell division inhibitor, putative, expressed | K07071: uncharacterized protein |
| 17 | Sobic.006G097500 | zeaxanthin epoxidase, chloroplast precursor, putative, expressed | K09838: ZEP, zeaxanthin epoxidase |
| 18 | Sobic.006G265900 | thioredoxin, putative, expressed | K03671: thioredoxin 1 |
| 19 | Sobic.003G419900 | photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed | K08903: photosystem II 13kDa protein |
| 20 | Sobic.002G351600 | prenyltransferase, putative, expressed | K12501: homogentisate solanesyltransferase |
Gene co-expression network
Octagon: transcription factors
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