Gene annotation
Transcriptome id Sobic.005G004500.2,Sobic.005G004500.1
Synonym ATFER4, FER4, Sb05g000530
Functional annotation ferritin-1, chloroplast precursor, putative, expressed
UniProt A0A1B6PPF6 , A0A1B6PPF8
Pfam PF00210
Panther DB PTHR11431 PTHR11431:SF4
NCBI CDD KOG2332; Ferritin
KEGG Orthology K00522; ferritin heavy chain
Gene Ontology GO:0008199; ferric iron binding GO:0006879cellular iron ion homeostasis GO:0006826iron ion transport


Orthologs (automatic annotation)
TAIR AT2G40300 : ferritin 4
RAP-DB (Rice) LOC_Os12g01530.2 : ferritin-1, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a033274 , Zm00025a053663
Brachypodium -
Barley HORVU4Hr1G024570.4 , HORVU4Hr1G024570.1 , HORVU4Hr1G024570.2 , HORVU4Hr1G024570.3
Wheat TraesCS5D02G157600 , TraesCS4B02G137200 , TraesCS4D02G131700 , TraesCS4D02G131700 , TraesCS5B02G151000
Populus -


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cDNA sequences
Sobic.005G004500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
2 Sobic.006G108200 expressed protein -
3 Sobic.004G154800 expressed protein -
4 Sobic.004G055000 peptidase, cysteine peptidase active site, putative, expressed -
5 Sobic.001G352200 heavy metal-associated domain containing protein, expressed -
6 Sobic.005G134100 rubredoxin family protein, putative, expressed -
7 Sobic.004G028300 expressed protein -
8 Sobic.001G167900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
9 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
10 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
11 Sobic.004G305900 heat shock protein DnaJ, putative, expressed -
12 Sobic.003G275200 methyltransferase domain containing protein, expressed -
13 Sobic.002G267900 expressed protein -
14 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
15 Sobic.005G062700 nifU, putative, expressed -
16 Sobic.004G326500 PAP fibrillin family domain containing protein, expressed -
17 Sobic.009G131800 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
18 Sobic.004G055500 inositol-1-monophosphatase, putative, expressed K01092: E3.1.3.25, IMPA, myo-inositol-1(or 4)-monophosphatase
19 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
20 Sobic.004G020300 expressed protein -


Gene co-expression network
sample Sobic005G004500 Sobic005G004500 Sobic002G200900 Sobic002G200900 Sobic005G004500--Sobic002G200900 Sobic006G108200 Sobic006G108200 Sobic005G004500--Sobic006G108200 Sobic004G154800 Sobic004G154800 Sobic005G004500--Sobic004G154800 Sobic004G055000 Sobic004G055000 Sobic005G004500--Sobic004G055000 Sobic001G352200 Sobic001G352200 Sobic005G004500--Sobic001G352200 Sobic005G134100 Sobic005G134100 Sobic005G004500--Sobic005G134100 Sobic004G028300 Sobic004G028300 Sobic005G004500--Sobic004G028300 Sobic001G167900 Sobic001G167900 Sobic005G004500--Sobic001G167900 Sobic002G351600 Sobic002G351600 Sobic005G004500--Sobic002G351600 Sobic002G200900--Sobic006G108200 Sobic004G281900 Sobic004G281900 Sobic002G200900--Sobic004G281900 Sobic002G200900--Sobic002G351600 Sobic001G220000 Sobic001G220000 Sobic002G200900--Sobic001G220000 Sobic002G200900--Sobic004G055000 Sobic003G275200 Sobic003G275200 Sobic002G200900--Sobic003G275200 Sobic006G155500 Sobic006G155500 Sobic002G200900--Sobic006G155500 Sobic006G050400 Sobic006G050400 Sobic002G200900--Sobic006G050400 Sobic002G159100 Sobic002G159100 Sobic002G200900--Sobic002G159100 Sobic006G108200--Sobic003G275200 Sobic006G108200--Sobic002G351600 Sobic006G108200--Sobic004G055000 Sobic006G108200--Sobic004G028300 Sobic006G108200--Sobic004G154800 Sobic006G108200--Sobic002G200900 Sobic006G108200--Sobic001G220000 Sobic006G108200--Sobic001G167900 Sobic006G108200--Sobic005G134100 Sobic004G154800--Sobic004G055000 Sobic004G154800--Sobic003G275200 Sobic004G154800--Sobic001G167900 Sobic004G154800--Sobic006G108200 Sobic004G124400 Sobic004G124400 Sobic004G154800--Sobic004G124400 Sobic004G154800--Sobic004G028300 Sobic004G154800--Sobic001G220000 Sobic004G154800--Sobic002G351600 Sobic010G062500 Sobic010G062500 Sobic004G154800--Sobic010G062500 Sobic004G055000--Sobic003G275200 Sobic004G055000--Sobic004G154800 Sobic008G172700 Sobic008G172700 Sobic004G055000--Sobic008G172700 Sobic002G267900 Sobic002G267900 Sobic004G055000--Sobic002G267900 Sobic009G131800 Sobic009G131800 Sobic004G055000--Sobic009G131800 Sobic004G326500 Sobic004G326500 Sobic004G055000--Sobic004G326500 Sobic004G055000--Sobic002G351600 Sobic004G055000--Sobic006G108200 Sobic002G272100 Sobic002G272100 Sobic004G055000--Sobic002G272100 Sobic004G305900 Sobic004G305900 Sobic001G352200--Sobic004G305900 Sobic003G428600 Sobic003G428600 Sobic001G352200--Sobic003G428600 Sobic008G088821 Sobic008G088821 Sobic001G352200--Sobic008G088821 Sobic001G352200--Sobic001G167900 Sobic006G140500 Sobic006G140500 Sobic001G352200--Sobic006G140500 Sobic003G103300 Sobic003G103300 Sobic001G352200--Sobic003G103300 Sobic004G268400 Sobic004G268400 Sobic001G352200--Sobic004G268400 Sobic001G352200--Sobic004G028300 Sobic001G018000 Sobic001G018000 Sobic001G352200--Sobic001G018000 Sobic005G134100--Sobic004G028300 Sobic005G134100--Sobic008G088821 Sobic005G134100--Sobic006G108200 Sobic005G134100--Sobic006G140500 Sobic001G015200 Sobic001G015200 Sobic005G134100--Sobic001G015200 Sobic005G134100--Sobic001G167900 Sobic005G062700 Sobic005G062700 Sobic005G134100--Sobic005G062700 Sobic002G047400 Sobic002G047400 Sobic005G134100--Sobic002G047400 Sobic004G317700 Sobic004G317700 Sobic005G134100--Sobic004G317700 Sobic004G028300--Sobic008G088821 Sobic004G028300--Sobic001G167900 Sobic004G028300--Sobic006G140500 Sobic006G063900 Sobic006G063900 Sobic004G028300--Sobic006G063900 Sobic004G028300--Sobic001G015200 Sobic004G028300--Sobic005G134100 Sobic003G419900 Sobic003G419900 Sobic004G028300--Sobic003G419900 Sobic004G359600 Sobic004G359600 Sobic004G028300--Sobic004G359600 Sobic004G028300--Sobic006G108200 Sobic001G167900--Sobic004G028300 Sobic001G167900--Sobic004G124400 Sobic001G167900--Sobic004G359600 Sobic001G167900--Sobic006G063900 Sobic001G167900--Sobic001G015200 Sobic001G167900--Sobic008G088821 Sobic001G167900--Sobic002G351600 Sobic007G166300 Sobic007G166300 Sobic001G167900--Sobic007G166300 Sobic007G130400 Sobic007G130400 Sobic001G167900--Sobic007G130400 Sobic008G050400 Sobic008G050400 Sobic002G351600--Sobic008G050400 Sobic002G351600--Sobic002G272100 Sobic002G351600--Sobic001G167900 Sobic002G401800 Sobic002G401800 Sobic002G351600--Sobic002G401800 Sobic002G351600--Sobic008G172700 Sobic002G351600--Sobic006G108200 Sobic002G351600--Sobic004G055000 Sobic002G351600--Sobic004G124400 Sobic002G351600--Sobic003G275200
Octagon: transcription factors


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