Gene annotation
Transcriptome id Sobic.007G132500.1
Synonym Sb07g020870, MEE11
Functional annotation F-box domain containing protein, expressed
UniProt C5YL35
Pfam -
Panther DB PTHR24006
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01620 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os08g33140.1 : F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a031093
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
2 Sobic.005G021600 expressed protein -
3 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -
4 Sobic.003G208300 PPR repeat domain containing protein, putative, expressed -
5 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
6 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
7 Sobic.009G028400 expressed protein -
8 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.008G063200 expressed protein -
10 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G245800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoglycerate mutase, putative, expressed -
12 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
13 Sobic.004G343100 YCF37, putative, expressed -
14 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
15 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
17 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
18 Sobic.003G342200 dihydroflavonol-4-reductase, putative, expressed -
19 Sobic.006G125000 expressed protein -
20 Sobic.003G439600 amino acid kinase, putative, expressed K09903: uridylate kinase


Gene co-expression network
sample Sobic007G132500 Sobic007G132500 Sobic006G197700 Sobic006G197700 Sobic007G132500--Sobic006G197700 Sobic005G021600 Sobic005G021600 Sobic007G132500--Sobic005G021600 Sobic006G111600 Sobic006G111600 Sobic007G132500--Sobic006G111600 Sobic003G208300 Sobic003G208300 Sobic007G132500--Sobic003G208300 Sobic008G063100 Sobic008G063100 Sobic007G132500--Sobic008G063100 Sobic001G006000 Sobic001G006000 Sobic007G132500--Sobic001G006000 Sobic009G028400 Sobic009G028400 Sobic007G132500--Sobic009G028400 Sobic006G110900 Sobic006G110900 Sobic007G132500--Sobic006G110900 Sobic008G063200 Sobic008G063200 Sobic007G132500--Sobic008G063200 Sobic003G245800 Sobic003G245800 Sobic006G197700--Sobic003G245800 Sobic002G345200 Sobic002G345200 Sobic006G197700--Sobic002G345200 Sobic006G197700--Sobic006G111600 Sobic006G197700--Sobic007G132500 Sobic003G439600 Sobic003G439600 Sobic006G197700--Sobic003G439600 Sobic003G330100 Sobic003G330100 Sobic006G197700--Sobic003G330100 Sobic003G221700 Sobic003G221700 Sobic006G197700--Sobic003G221700 Sobic002G386400 Sobic002G386400 Sobic006G197700--Sobic002G386400 Sobic002G163700 Sobic002G163700 Sobic006G197700--Sobic002G163700 Sobic005G021600--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic005G021600--Sobic010G265500 Sobic005G021600--Sobic009G028400 Sobic002G195700 Sobic002G195700 Sobic005G021600--Sobic002G195700 Sobic007G178500 Sobic007G178500 Sobic005G021600--Sobic007G178500 Sobic010G218600 Sobic010G218600 Sobic005G021600--Sobic010G218600 Sobic002G281000 Sobic002G281000 Sobic005G021600--Sobic002G281000 Sobic005G021600--Sobic007G132500 Sobic005G021600--Sobic001G006000 Sobic006G111600--Sobic003G330100 Sobic006G111600--Sobic003G221700 Sobic002G131700 Sobic002G131700 Sobic006G111600--Sobic002G131700 Sobic004G179200 Sobic004G179200 Sobic006G111600--Sobic004G179200 Sobic009G234200 Sobic009G234200 Sobic006G111600--Sobic009G234200 Sobic004G250200 Sobic004G250200 Sobic006G111600--Sobic004G250200 Sobic010G183400 Sobic010G183400 Sobic006G111600--Sobic010G183400 Sobic006G111600--Sobic006G197700 Sobic006G111600--Sobic009G028400 Sobic003G208300--Sobic002G386400 Sobic003G208300--Sobic007G132500 Sobic002G038300 Sobic002G038300 Sobic003G208300--Sobic002G038300 Sobic003G208300--Sobic002G163700 Sobic009G004800 Sobic009G004800 Sobic003G208300--Sobic009G004800 Sobic003G208300--Sobic006G197700 Sobic001G161300 Sobic001G161300 Sobic003G208300--Sobic001G161300 Sobic006G214700 Sobic006G214700 Sobic003G208300--Sobic006G214700 Sobic003G208300--Sobic003G330100 Sobic004G343100 Sobic004G343100 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic008G063100--Sobic001G404500 Sobic001G198700 Sobic001G198700 Sobic008G063100--Sobic001G198700 Sobic004G063200 Sobic004G063200 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic009G202400 Sobic009G202400 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic010G076800 Sobic010G076800 Sobic001G006000--Sobic010G076800 Sobic001G006000--Sobic009G028400 Sobic004G253400 Sobic004G253400 Sobic001G006000--Sobic004G253400 Sobic001G006000--Sobic008G063200 Sobic007G076900 Sobic007G076900 Sobic001G006000--Sobic007G076900 Sobic001G006000--Sobic004G179200 Sobic001G339100 Sobic001G339100 Sobic001G006000--Sobic001G339100 Sobic003G253300 Sobic003G253300 Sobic001G006000--Sobic003G253300 Sobic001G006000--Sobic003G245800 Sobic009G028400--Sobic001G006000 Sobic009G028400--Sobic001G339100 Sobic009G028400--Sobic006G111600 Sobic009G028400--Sobic005G021600 Sobic009G028400--Sobic003G221700 Sobic009G028400--Sobic003G330100 Sobic009G028400--Sobic007G178500 Sobic009G028400--Sobic004G179200 Sobic003G310100 Sobic003G310100 Sobic009G028400--Sobic003G310100 Sobic006G110900--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic006G110900--Sobic001G286600 Sobic006G155500 Sobic006G155500 Sobic006G110900--Sobic006G155500 Sobic006G110900--Sobic006G214700 Sobic006G110900--Sobic008G063200 Sobic001G118400 Sobic001G118400 Sobic006G110900--Sobic001G118400 Sobic004G224500 Sobic004G224500 Sobic006G110900--Sobic004G224500 Sobic003G328100 Sobic003G328100 Sobic006G110900--Sobic003G328100 Sobic006G050400 Sobic006G050400 Sobic006G110900--Sobic006G050400 Sobic001G450600 Sobic001G450600 Sobic008G063200--Sobic001G450600 Sobic008G063200--Sobic006G110900 Sobic008G063200--Sobic006G214700 Sobic008G063200--Sobic001G006000 Sobic002G102200 Sobic002G102200 Sobic008G063200--Sobic002G102200 Sobic008G063200--Sobic003G253300 Sobic008G063200--Sobic010G076800 Sobic004G333400 Sobic004G333400 Sobic008G063200--Sobic004G333400 Sobic003G342200 Sobic003G342200 Sobic008G063200--Sobic003G342200
Octagon: transcription factors


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