Gene annotation
Transcriptome id Sobic.004G343100.1
Synonym Sb04g037030
Functional annotation YCF37, putative, expressed
UniProt C5XVU7
Pfam -
Panther DB PTHR36734
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23670 : homolog of Synechocystis YCF37
RAP-DB (Rice) LOC_Os02g57020.1 : YCF37, putative, expressed
MaizeGDB (Corn) Zm00025a022588
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
2 Sobic.010G265500 expressed protein -
3 Sobic.005G021600 expressed protein -
4 Sobic.003G421400 expressed protein -
5 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
6 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
8 Sobic.007G132500 F-box domain containing protein, expressed -
9 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
10 Sobic.007G178500 cytochrome P450, putative, expressed -
11 Sobic.003G437600 thioredoxin, putative, expressed -
12 Sobic.005G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
13 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
15 Sobic.002G256000 dehydrogenase, putative, expressed -
16 Sobic.010G218600 inactive receptor kinase At2g26730 precursor, putative, expressed -
17 Sobic.009G202400 expressed protein -
18 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
19 Sobic.010G199000 bZIP transcription factor domain containing protein, expressed -
20 Sobic.002G069050 - -


Gene co-expression network
sample Sobic004G343100 Sobic004G343100 Sobic008G063100 Sobic008G063100 Sobic004G343100--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic004G343100--Sobic010G265500 Sobic005G021600 Sobic005G021600 Sobic004G343100--Sobic005G021600 Sobic003G421400 Sobic003G421400 Sobic004G343100--Sobic003G421400 Sobic001G498300 Sobic001G498300 Sobic004G343100--Sobic001G498300 Sobic003G187000 Sobic003G187000 Sobic004G343100--Sobic003G187000 Sobic001G161300 Sobic001G161300 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic002G281000 Sobic002G281000 Sobic004G343100--Sobic002G281000 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic008G063100--Sobic001G404500 Sobic001G198700 Sobic001G198700 Sobic008G063100--Sobic001G198700 Sobic004G063200 Sobic004G063200 Sobic008G063100--Sobic004G063200 Sobic002G195700 Sobic002G195700 Sobic008G063100--Sobic002G195700 Sobic009G202400 Sobic009G202400 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic010G265500--Sobic005G021600 Sobic010G265500--Sobic003G187000 Sobic010G265500--Sobic004G343100 Sobic010G218600 Sobic010G218600 Sobic010G265500--Sobic010G218600 Sobic007G178500 Sobic007G178500 Sobic010G265500--Sobic007G178500 Sobic009G028400 Sobic009G028400 Sobic010G265500--Sobic009G028400 Sobic010G265500--Sobic001G498300 Sobic010G265500--Sobic008G063100 Sobic001G447700 Sobic001G447700 Sobic010G265500--Sobic001G447700 Sobic005G021600--Sobic008G063100 Sobic005G021600--Sobic010G265500 Sobic005G021600--Sobic009G028400 Sobic005G021600--Sobic002G195700 Sobic005G021600--Sobic007G178500 Sobic005G021600--Sobic010G218600 Sobic005G021600--Sobic002G281000 Sobic005G021600--Sobic007G132500 Sobic001G006000 Sobic001G006000 Sobic005G021600--Sobic001G006000 Sobic003G254600 Sobic003G254600 Sobic003G421400--Sobic003G254600 Sobic008G063200 Sobic008G063200 Sobic003G421400--Sobic008G063200 Sobic003G421400--Sobic004G343100 Sobic009G034600 Sobic009G034600 Sobic003G421400--Sobic009G034600 Sobic003G421400--Sobic008G063100 Sobic010G186400 Sobic010G186400 Sobic003G421400--Sobic010G186400 Sobic003G421400--Sobic005G021600 Sobic006G110900 Sobic006G110900 Sobic003G421400--Sobic006G110900 Sobic001G286600 Sobic001G286600 Sobic003G421400--Sobic001G286600 Sobic001G498300--Sobic010G218600 Sobic001G498300--Sobic003G187000 Sobic001G498300--Sobic007G178500 Sobic001G407900 Sobic001G407900 Sobic001G498300--Sobic001G407900 Sobic008G063500 Sobic008G063500 Sobic001G498300--Sobic008G063500 Sobic001G498300--Sobic004G343100 Sobic001G498300--Sobic005G021600 Sobic005G192600 Sobic005G192600 Sobic001G498300--Sobic005G192600 Sobic004G314800 Sobic004G314800 Sobic001G498300--Sobic004G314800 Sobic003G187000--Sobic007G178500 Sobic003G187000--Sobic001G498300 Sobic003G187000--Sobic010G265500 Sobic003G187000--Sobic004G314800 Sobic003G187000--Sobic009G028400 Sobic003G187000--Sobic004G343100 Sobic003G187000--Sobic008G063500 Sobic003G187000--Sobic005G021600 Sobic007G023300 Sobic007G023300 Sobic003G187000--Sobic007G023300 Sobic002G038300 Sobic002G038300 Sobic001G161300--Sobic002G038300 Sobic004G007500 Sobic004G007500 Sobic001G161300--Sobic004G007500 Sobic002G386400 Sobic002G386400 Sobic001G161300--Sobic002G386400 Sobic004G068700 Sobic004G068700 Sobic001G161300--Sobic004G068700 Sobic001G276100 Sobic001G276100 Sobic001G161300--Sobic001G276100 Sobic002G226100 Sobic002G226100 Sobic001G161300--Sobic002G226100 Sobic002G384400 Sobic002G384400 Sobic001G161300--Sobic002G384400 Sobic001G161300--Sobic004G343100 Sobic009G000900 Sobic009G000900 Sobic001G161300--Sobic009G000900 Sobic006G197700 Sobic006G197700 Sobic007G132500--Sobic006G197700 Sobic007G132500--Sobic005G021600 Sobic006G111600 Sobic006G111600 Sobic007G132500--Sobic006G111600 Sobic003G208300 Sobic003G208300 Sobic007G132500--Sobic003G208300 Sobic007G132500--Sobic008G063100 Sobic007G132500--Sobic001G006000 Sobic007G132500--Sobic009G028400 Sobic007G132500--Sobic006G110900 Sobic007G132500--Sobic008G063200 Sobic001G525900 Sobic001G525900 Sobic002G281000--Sobic001G525900 Sobic001G019300 Sobic001G019300 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic002G281000--Sobic009G202400 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic002G281000--Sobic005G021600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.