Gene annotation
Transcriptome id Sobic.002G256000.2,Sobic.002G256000.1
Synonym Sb02g029120
Functional annotation dehydrogenase, putative, expressed
UniProt A0A1W0W5Q2 , A0A1W0W5Q5
Pfam PF13602 PF08240 PF13602
Panther DB PTHR11695 PTHR11695:SF573
NCBI CDD KOG1198; Zinc-binding oxidoreductase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G13010 : Oxidoreductase, zinc-binding dehydrogenase family protein
RAP-DB (Rice) LOC_Os09g32640.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a014289 , Zm00025a047549
Brachypodium KQJ90893 , KQJ90855
Barley HORVU5Hr1G075540.4 , HORVU5Hr1G075540.2 , HORVU5Hr1G075540.3 , HORVU5Hr1G034150.2 , HORVU5Hr1G034150.3 , HORVU5Hr1G034150.1 , HORVU5Hr1G034150.6 , HORVU5Hr1G034150.7 , HORVU5Hr1G034150.4 , HORVU5Hr1G034150.5 , HORVU5Hr1G075550.11 , HORVU5Hr1G075550.5 , HORVU5Hr1G075550.4 , HORVU5Hr1G075550.7 , HORVU5Hr1G075550.6 , HORVU5Hr1G075550.8
Wheat TraesCS5A02G280700 , TraesCS5B02G279900 , TraesCS2A02G277700 , TraesCS2B02G295100 , TraesCS5A02G280800 , TraesCS2B02G295200 , TraesCS5D02G287300 , TraesCS5D02G287300 , TraesCS2D02G276700 , TraesCS5D02G287700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G417200 ATP synthase B chain, chloroplast precursor, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
2 Sobic.010G082800 calvin cycle protein CP12, putative, expressed -
3 Sobic.006G125000 expressed protein -
4 Sobic.004G343100 YCF37, putative, expressed -
5 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
6 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
7 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
8 Sobic.005G021600 expressed protein -
9 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.007G178500 cytochrome P450, putative, expressed -
11 Sobic.010G265500 expressed protein -
12 Sobic.003G421400 expressed protein -
13 Sobic.002G088200 expressed protein -
14 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
15 Sobic.004G253400 tic20 protein-related, putative, expressed -
16 Sobic.002G316700 ATP synthase subunit gamma(PubMedID : 26186930)@ATP synthase subunit gamma (Zm)(PubMedID : 27208977)@ATP synthase gamma chain, putative, expressed K02115: ATPF1G, F-type H+-transporting ATPase subunit gamma
17 Sobic.003G342200 dihydroflavonol-4-reductase, putative, expressed -
18 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
19 Sobic.007G023300 photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed K02723: photosystem II PsbY protein
20 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -


Gene co-expression network
sample Sobic002G256000 Sobic002G256000 Sobic001G417200 Sobic001G417200 Sobic002G256000--Sobic001G417200 Sobic010G082800 Sobic010G082800 Sobic002G256000--Sobic010G082800 Sobic006G125000 Sobic006G125000 Sobic002G256000--Sobic006G125000 Sobic004G343100 Sobic004G343100 Sobic002G256000--Sobic004G343100 Sobic008G063100 Sobic008G063100 Sobic002G256000--Sobic008G063100 Sobic001G035800 Sobic001G035800 Sobic002G256000--Sobic001G035800 Sobic001G498300 Sobic001G498300 Sobic002G256000--Sobic001G498300 Sobic005G021600 Sobic005G021600 Sobic002G256000--Sobic005G021600 Sobic003G187000 Sobic003G187000 Sobic002G256000--Sobic003G187000 Sobic009G143100 Sobic009G143100 Sobic001G417200--Sobic009G143100 Sobic007G071500 Sobic007G071500 Sobic001G417200--Sobic007G071500 Sobic002G316700 Sobic002G316700 Sobic001G417200--Sobic002G316700 Sobic007G223500 Sobic007G223500 Sobic001G417200--Sobic007G223500 Sobic006G093900 Sobic006G093900 Sobic001G417200--Sobic006G093900 Sobic001G417200--Sobic001G035800 Sobic003G387800 Sobic003G387800 Sobic001G417200--Sobic003G387800 Sobic001G029100 Sobic001G029100 Sobic001G417200--Sobic001G029100 Sobic007G004800 Sobic007G004800 Sobic001G417200--Sobic007G004800 Sobic010G082800--Sobic002G256000 Sobic010G082800--Sobic005G021600 Sobic009G138900 Sobic009G138900 Sobic010G082800--Sobic009G138900 Sobic009G253000 Sobic009G253000 Sobic010G082800--Sobic009G253000 Sobic010G082800--Sobic008G063100 Sobic003G421400 Sobic003G421400 Sobic010G082800--Sobic003G421400 Sobic002G038300 Sobic002G038300 Sobic010G082800--Sobic002G038300 Sobic002G386400 Sobic002G386400 Sobic010G082800--Sobic002G386400 Sobic002G195700 Sobic002G195700 Sobic010G082800--Sobic002G195700 Sobic003G342200 Sobic003G342200 Sobic006G125000--Sobic003G342200 Sobic001G175700 Sobic001G175700 Sobic006G125000--Sobic001G175700 Sobic009G131800 Sobic009G131800 Sobic006G125000--Sobic009G131800 Sobic006G050400 Sobic006G050400 Sobic006G125000--Sobic006G050400 Sobic006G110900 Sobic006G110900 Sobic006G125000--Sobic006G110900 Sobic004G253400 Sobic004G253400 Sobic006G125000--Sobic004G253400 Sobic001G006000 Sobic001G006000 Sobic006G125000--Sobic001G006000 Sobic009G028400 Sobic009G028400 Sobic006G125000--Sobic009G028400 Sobic003G253300 Sobic003G253300 Sobic006G125000--Sobic003G253300 Sobic004G343100--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic004G343100--Sobic010G265500 Sobic004G343100--Sobic005G021600 Sobic004G343100--Sobic003G421400 Sobic004G343100--Sobic001G498300 Sobic004G343100--Sobic003G187000 Sobic001G161300 Sobic001G161300 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic002G281000 Sobic002G281000 Sobic004G343100--Sobic002G281000 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic008G063100--Sobic001G404500 Sobic001G198700 Sobic001G198700 Sobic008G063100--Sobic001G198700 Sobic004G063200 Sobic004G063200 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic009G202400 Sobic009G202400 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic009G055800 Sobic009G055800 Sobic001G035800--Sobic009G055800 Sobic001G035800--Sobic001G417200 Sobic004G227200 Sobic004G227200 Sobic001G035800--Sobic004G227200 Sobic001G405700 Sobic001G405700 Sobic001G035800--Sobic001G405700 Sobic001G035800--Sobic006G093900 Sobic003G254600 Sobic003G254600 Sobic001G035800--Sobic003G254600 Sobic003G412900 Sobic003G412900 Sobic001G035800--Sobic003G412900 Sobic003G439000 Sobic003G439000 Sobic001G035800--Sobic003G439000 Sobic001G168800 Sobic001G168800 Sobic001G035800--Sobic001G168800 Sobic010G218600 Sobic010G218600 Sobic001G498300--Sobic010G218600 Sobic001G498300--Sobic003G187000 Sobic007G178500 Sobic007G178500 Sobic001G498300--Sobic007G178500 Sobic001G407900 Sobic001G407900 Sobic001G498300--Sobic001G407900 Sobic008G063500 Sobic008G063500 Sobic001G498300--Sobic008G063500 Sobic001G498300--Sobic004G343100 Sobic001G498300--Sobic005G021600 Sobic005G192600 Sobic005G192600 Sobic001G498300--Sobic005G192600 Sobic004G314800 Sobic004G314800 Sobic001G498300--Sobic004G314800 Sobic005G021600--Sobic008G063100 Sobic005G021600--Sobic010G265500 Sobic005G021600--Sobic009G028400 Sobic005G021600--Sobic002G195700 Sobic005G021600--Sobic007G178500 Sobic005G021600--Sobic010G218600 Sobic005G021600--Sobic002G281000 Sobic005G021600--Sobic007G132500 Sobic005G021600--Sobic001G006000 Sobic003G187000--Sobic007G178500 Sobic003G187000--Sobic001G498300 Sobic003G187000--Sobic010G265500 Sobic003G187000--Sobic004G314800 Sobic003G187000--Sobic009G028400 Sobic003G187000--Sobic004G343100 Sobic003G187000--Sobic008G063500 Sobic003G187000--Sobic005G021600 Sobic007G023300 Sobic007G023300 Sobic003G187000--Sobic007G023300
Octagon: transcription factors


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