Gene annotation
Transcriptome id Sobic.003G421400.1
Synonym HCF153, Sb03g045440
Functional annotation expressed protein
UniProt C5XHR6
Pfam -
Panther DB PTHR37753 PTHR37753:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31560 : high chlorophyll fluorescence 153
RAP-DB (Rice) LOC_Os01g71330.1 : expressed protein
MaizeGDB (Corn) Zm00025a026067 , Zm00025a039155
Brachypodium PNT73571 , KQK11474
Barley HORVU3Hr1G105260.1 , HORVU3Hr1G105260.2
Wheat TraesCS3B02G525600 , TraesCS3A02G480700 , TraesCS3D02G475500
Populus -


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cDNA sequences
Sobic.003G421400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G254600 expressed protein -
2 Sobic.008G063200 expressed protein -
3 Sobic.004G343100 YCF37, putative, expressed -
4 Sobic.009G034600 expressed protein -
5 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
6 Sobic.010G186400 Tetratricopeptide repeat (TPR)-like superfamily protein(PubMedID : 26465154)@expressed protein -
7 Sobic.005G021600 expressed protein -
8 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
10 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
11 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
12 Sobic.003G125400 Fe-S metabolism associated domain containing protein, expressed -
13 Sobic.010G265500 expressed protein -
14 Sobic.004G309400 DCL, chloroplast precursor, putative, expressed -
15 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
16 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
17 Sobic.007G132500 F-box domain containing protein, expressed -
18 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
19 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
20 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G421400 Sobic003G421400 Sobic003G254600 Sobic003G254600 Sobic003G421400--Sobic003G254600 Sobic008G063200 Sobic008G063200 Sobic003G421400--Sobic008G063200 Sobic004G343100 Sobic004G343100 Sobic003G421400--Sobic004G343100 Sobic009G034600 Sobic009G034600 Sobic003G421400--Sobic009G034600 Sobic008G063100 Sobic008G063100 Sobic003G421400--Sobic008G063100 Sobic010G186400 Sobic010G186400 Sobic003G421400--Sobic010G186400 Sobic005G021600 Sobic005G021600 Sobic003G421400--Sobic005G021600 Sobic006G110900 Sobic006G110900 Sobic003G421400--Sobic006G110900 Sobic001G286600 Sobic001G286600 Sobic003G421400--Sobic001G286600 Sobic001G196200 Sobic001G196200 Sobic003G254600--Sobic001G196200 Sobic001G035800 Sobic001G035800 Sobic003G254600--Sobic001G035800 Sobic006G107600 Sobic006G107600 Sobic003G254600--Sobic006G107600 Sobic003G254600--Sobic003G421400 Sobic009G055800 Sobic009G055800 Sobic003G254600--Sobic009G055800 Sobic001G489800 Sobic001G489800 Sobic003G254600--Sobic001G489800 Sobic001G447700 Sobic001G447700 Sobic003G254600--Sobic001G447700 Sobic001G469900 Sobic001G469900 Sobic003G254600--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic003G254600--Sobic007G085800 Sobic001G450600 Sobic001G450600 Sobic008G063200--Sobic001G450600 Sobic008G063200--Sobic006G110900 Sobic006G214700 Sobic006G214700 Sobic008G063200--Sobic006G214700 Sobic001G006000 Sobic001G006000 Sobic008G063200--Sobic001G006000 Sobic002G102200 Sobic002G102200 Sobic008G063200--Sobic002G102200 Sobic003G253300 Sobic003G253300 Sobic008G063200--Sobic003G253300 Sobic010G076800 Sobic010G076800 Sobic008G063200--Sobic010G076800 Sobic004G333400 Sobic004G333400 Sobic008G063200--Sobic004G333400 Sobic003G342200 Sobic003G342200 Sobic008G063200--Sobic003G342200 Sobic004G343100--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic004G343100--Sobic010G265500 Sobic004G343100--Sobic005G021600 Sobic004G343100--Sobic003G421400 Sobic001G498300 Sobic001G498300 Sobic004G343100--Sobic001G498300 Sobic003G187000 Sobic003G187000 Sobic004G343100--Sobic003G187000 Sobic001G161300 Sobic001G161300 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic002G281000 Sobic002G281000 Sobic004G343100--Sobic002G281000 Sobic009G034600--Sobic008G063200 Sobic009G034600--Sobic003G421400 Sobic010G269400 Sobic010G269400 Sobic009G034600--Sobic010G269400 Sobic001G102300 Sobic001G102300 Sobic009G034600--Sobic001G102300 Sobic003G292600 Sobic003G292600 Sobic009G034600--Sobic003G292600 Sobic006G258700 Sobic006G258700 Sobic009G034600--Sobic006G258700 Sobic006G188000 Sobic006G188000 Sobic009G034600--Sobic006G188000 Sobic010G207500 Sobic010G207500 Sobic009G034600--Sobic010G207500 Sobic010G241300 Sobic010G241300 Sobic009G034600--Sobic010G241300 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic008G063100--Sobic001G404500 Sobic001G198700 Sobic001G198700 Sobic008G063100--Sobic001G198700 Sobic004G063200 Sobic004G063200 Sobic008G063100--Sobic004G063200 Sobic002G195700 Sobic002G195700 Sobic008G063100--Sobic002G195700 Sobic009G202400 Sobic009G202400 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic010G186400--Sobic003G421400 Sobic002G386400 Sobic002G386400 Sobic010G186400--Sobic002G386400 Sobic003G360800 Sobic003G360800 Sobic010G186400--Sobic003G360800 Sobic010G186400--Sobic006G110900 Sobic010G186400--Sobic008G063200 Sobic009G141400 Sobic009G141400 Sobic010G186400--Sobic009G141400 Sobic001G121100 Sobic001G121100 Sobic010G186400--Sobic001G121100 Sobic010G186400--Sobic001G161300 Sobic010G186400--Sobic003G253300 Sobic005G021600--Sobic008G063100 Sobic005G021600--Sobic010G265500 Sobic009G028400 Sobic009G028400 Sobic005G021600--Sobic009G028400 Sobic005G021600--Sobic002G195700 Sobic007G178500 Sobic007G178500 Sobic005G021600--Sobic007G178500 Sobic010G218600 Sobic010G218600 Sobic005G021600--Sobic010G218600 Sobic005G021600--Sobic002G281000 Sobic005G021600--Sobic007G132500 Sobic005G021600--Sobic001G006000 Sobic006G110900--Sobic003G253300 Sobic006G110900--Sobic001G286600 Sobic006G155500 Sobic006G155500 Sobic006G110900--Sobic006G155500 Sobic006G110900--Sobic006G214700 Sobic006G110900--Sobic008G063200 Sobic001G118400 Sobic001G118400 Sobic006G110900--Sobic001G118400 Sobic004G224500 Sobic004G224500 Sobic006G110900--Sobic004G224500 Sobic003G328100 Sobic003G328100 Sobic006G110900--Sobic003G328100 Sobic006G050400 Sobic006G050400 Sobic006G110900--Sobic006G050400 Sobic004G154400 Sobic004G154400 Sobic001G286600--Sobic004G154400 Sobic009G062400 Sobic009G062400 Sobic001G286600--Sobic009G062400 Sobic001G286600--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic001G286600--Sobic010G058200 Sobic001G286600--Sobic001G118400 Sobic001G286600--Sobic003G328100 Sobic001G286600--Sobic006G155500 Sobic001G286600--Sobic006G110900 Sobic003G070900 Sobic003G070900 Sobic001G286600--Sobic003G070900
Octagon: transcription factors


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