Gene annotation
Transcriptome id Sobic.005G021600.2,Sobic.005G021600.1
Synonym Sb05g001820
Functional annotation expressed protein
UniProt A0A1B6PPQ9 , A0A1B6PPR0
Pfam PF03745
Panther DB PTHR34796 PTHR34796:SF1 PTHR34796:SF1 PTHR34796
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41120 : -
RAP-DB (Rice) LOC_Os11g03580.1 : expressed protein
MaizeGDB (Corn) Zm00025a033378
Brachypodium KQJ89529
Barley HORVU4Hr1G026810.1 , HORVU4Hr1G026800.1
Wheat TraesCSU02G261400 , TraesCS4D02G124600 , TraesCS4B02G128100
Populus -


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cDNA sequences
Sobic.005G021600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
2 Sobic.010G265500 expressed protein -
3 Sobic.009G028400 expressed protein -
4 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
5 Sobic.007G178500 cytochrome P450, putative, expressed -
6 Sobic.010G218600 inactive receptor kinase At2g26730 precursor, putative, expressed -
7 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
8 Sobic.007G132500 F-box domain containing protein, expressed -
9 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
10 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
11 Sobic.004G343100 YCF37, putative, expressed -
12 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
13 Sobic.001G525900 homeobox domain containing protein, expressed -
14 Sobic.004G224500 OsClp3 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
15 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
16 Sobic.008G073400 B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
17 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
18 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.008G063200 expressed protein -
20 Sobic.010G089200 expressed protein -


Gene co-expression network
sample Sobic005G021600 Sobic005G021600 Sobic008G063100 Sobic008G063100 Sobic005G021600--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic005G021600--Sobic010G265500 Sobic009G028400 Sobic009G028400 Sobic005G021600--Sobic009G028400 Sobic002G195700 Sobic002G195700 Sobic005G021600--Sobic002G195700 Sobic007G178500 Sobic007G178500 Sobic005G021600--Sobic007G178500 Sobic010G218600 Sobic010G218600 Sobic005G021600--Sobic010G218600 Sobic002G281000 Sobic002G281000 Sobic005G021600--Sobic002G281000 Sobic007G132500 Sobic007G132500 Sobic005G021600--Sobic007G132500 Sobic001G006000 Sobic001G006000 Sobic005G021600--Sobic001G006000 Sobic004G343100 Sobic004G343100 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic008G063100--Sobic001G404500 Sobic001G198700 Sobic001G198700 Sobic008G063100--Sobic001G198700 Sobic004G063200 Sobic004G063200 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic009G202400 Sobic009G202400 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic010G265500--Sobic005G021600 Sobic003G187000 Sobic003G187000 Sobic010G265500--Sobic003G187000 Sobic010G265500--Sobic004G343100 Sobic010G265500--Sobic010G218600 Sobic010G265500--Sobic007G178500 Sobic010G265500--Sobic009G028400 Sobic001G498300 Sobic001G498300 Sobic010G265500--Sobic001G498300 Sobic010G265500--Sobic008G063100 Sobic001G447700 Sobic001G447700 Sobic010G265500--Sobic001G447700 Sobic009G028400--Sobic001G006000 Sobic001G339100 Sobic001G339100 Sobic009G028400--Sobic001G339100 Sobic006G111600 Sobic006G111600 Sobic009G028400--Sobic006G111600 Sobic009G028400--Sobic005G021600 Sobic003G221700 Sobic003G221700 Sobic009G028400--Sobic003G221700 Sobic003G330100 Sobic003G330100 Sobic009G028400--Sobic003G330100 Sobic009G028400--Sobic007G178500 Sobic004G179200 Sobic004G179200 Sobic009G028400--Sobic004G179200 Sobic003G310100 Sobic003G310100 Sobic009G028400--Sobic003G310100 Sobic001G005500 Sobic001G005500 Sobic002G195700--Sobic001G005500 Sobic008G073400 Sobic008G073400 Sobic002G195700--Sobic008G073400 Sobic001G321600 Sobic001G321600 Sobic002G195700--Sobic001G321600 Sobic001G019300 Sobic001G019300 Sobic002G195700--Sobic001G019300 Sobic002G366100 Sobic002G366100 Sobic002G195700--Sobic002G366100 Sobic002G195700--Sobic002G281000 Sobic002G195700--Sobic005G021600 Sobic006G269400 Sobic006G269400 Sobic002G195700--Sobic006G269400 Sobic002G195700--Sobic001G198700 Sobic007G023300 Sobic007G023300 Sobic007G178500--Sobic007G023300 Sobic007G178500--Sobic003G187000 Sobic008G063500 Sobic008G063500 Sobic007G178500--Sobic008G063500 Sobic007G178500--Sobic005G021600 Sobic007G178500--Sobic001G498300 Sobic007G178500--Sobic001G339100 Sobic007G178500--Sobic009G028400 Sobic007G178500--Sobic010G265500 Sobic007G178500--Sobic010G218600 Sobic010G218600--Sobic001G498300 Sobic010G218600--Sobic005G021600 Sobic010G218600--Sobic010G265500 Sobic010G218600--Sobic007G178500 Sobic010G218600--Sobic008G063500 Sobic001G407900 Sobic001G407900 Sobic010G218600--Sobic001G407900 Sobic010G218600--Sobic001G447700 Sobic010G218600--Sobic007G023300 Sobic005G192600 Sobic005G192600 Sobic010G218600--Sobic005G192600 Sobic001G525900 Sobic001G525900 Sobic002G281000--Sobic001G525900 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic002G281000--Sobic009G202400 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic002G281000--Sobic005G021600 Sobic006G197700 Sobic006G197700 Sobic007G132500--Sobic006G197700 Sobic007G132500--Sobic005G021600 Sobic007G132500--Sobic006G111600 Sobic003G208300 Sobic003G208300 Sobic007G132500--Sobic003G208300 Sobic007G132500--Sobic008G063100 Sobic007G132500--Sobic001G006000 Sobic007G132500--Sobic009G028400 Sobic006G110900 Sobic006G110900 Sobic007G132500--Sobic006G110900 Sobic008G063200 Sobic008G063200 Sobic007G132500--Sobic008G063200 Sobic010G076800 Sobic010G076800 Sobic001G006000--Sobic010G076800 Sobic001G006000--Sobic009G028400 Sobic004G253400 Sobic004G253400 Sobic001G006000--Sobic004G253400 Sobic001G006000--Sobic008G063200 Sobic007G076900 Sobic007G076900 Sobic001G006000--Sobic007G076900 Sobic001G006000--Sobic004G179200 Sobic001G006000--Sobic001G339100 Sobic003G253300 Sobic003G253300 Sobic001G006000--Sobic003G253300 Sobic003G245800 Sobic003G245800 Sobic001G006000--Sobic003G245800
Octagon: transcription factors


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