Gene annotation
Transcriptome id Sobic.002G281000.2,Sobic.002G281000.1
Synonym PIP3, 7, PIP2, SIMIP, Sb02g031390, PIP3A
Functional annotation aquaporin protein, putative, expressed
UniProt A0A1B6QDU9 , A0A1B6QDV5
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF160
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09872; aquaporin PIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT4G35100 : plasma membrane intrinsic protein 3
RAP-DB (Rice) LOC_Os09g36930.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a045837 , Zm00025a021083 , Zm00025a032250 , Zm00025a032042 , Zm00025a010237 , Zm00025a049307 , Zm00025a010642 , Zm00025a049510 , Zm00025a013555 , Zm00025a013554
Brachypodium KQJ84016 , KQJ83644 , KQJ91255 , KQJ91256 , KQK00428 , KQK16441
Barley HORVU2Hr1G089820.11 , HORVU2Hr1G089820.10 , HORVU2Hr1G010990.4 , HORVU2Hr1G010990.3 , HORVU2Hr1G010990.2 , HORVU2Hr1G010990.1 , HORVU2Hr1G038740.12 , HORVU2Hr1G038740.13 , HORVU2Hr1G038740.10 , HORVU2Hr1G038740.11 , HORVU2Hr1G038740.16 , HORVU2Hr1G038740.17 , HORVU2Hr1G038740.14 , HORVU2Hr1G038740.15 , HORVU2Hr1G038740.18 , HORVU5Hr1G084230.1 , HORVU5Hr1G084230.2 , HORVU5Hr1G084230.4 , HORVU2Hr1G096360.6 , HORVU2Hr1G096360.7 , HORVU2Hr1G096360.4 , HORVU2Hr1G096360.5 , HORVU2Hr1G096360.2 , HORVU2Hr1G096360.3 , HORVU2Hr1G096360.1 , HORVU2Hr1G096360.8 , HORVU2Hr1G096360.9 , HORVU2Hr1G038740.8 , HORVU2Hr1G038740.1 , HORVU2Hr1G038740.2 , HORVU2Hr1G038740.3 , HORVU2Hr1G038740.5 , HORVU2Hr1G096360.14 , HORVU2Hr1G089820.5 , HORVU2Hr1G089820.4 , HORVU2Hr1G089820.7 , HORVU2Hr1G089820.6 , HORVU2Hr1G089820.1 , HORVU2Hr1G089820.3 , HORVU2Hr1G089820.2 , HORVU2Hr1G089820.9 , HORVU2Hr1G089820.8 , HORVU6Hr1G058930.9 , HORVU6Hr1G058930.8 , HORVU6Hr1G058930.4 , HORVU6Hr1G058930.1 , HORVU5Hr1G055200.7 , HORVU5Hr1G055200.6 , HORVU5Hr1G055200.5 , HORVU5Hr1G055200.4 , HORVU5Hr1G055200.3 , HORVU5Hr1G055200.1 , HORVU5Hr1G055200.8 , HORVU2Hr1G096360.15 , HORVU2Hr1G096360.11 , HORVU2Hr1G096360.12 , HORVU2Hr1G096360.13 , HORVU2Hr1G089940.7 , HORVU2Hr1G089940.6 , HORVU2Hr1G089940.14 , HORVU2Hr1G089940.4 , HORVU2Hr1G089940.5 , HORVU2Hr1G089940.2 , HORVU2Hr1G089940.3 , HORVU2Hr1G089940.15 , HORVU2Hr1G089940.8 , HORVU6Hr1G064140.7 , HORVU6Hr1G064140.6 , HORVU6Hr1G064140.5 , HORVU2Hr1G089940.1 , HORVU6Hr1G064140.3 , HORVU6Hr1G064140.2 , HORVU6Hr1G064140.1 , HORVU6Hr1G064140.4 , HORVU2Hr1G089940.18 , HORVU2Hr1G089940.19 , HORVU2Hr1G089940.16 , HORVU2Hr1G089940.17 , HORVU2Hr1G089940.10 , HORVU2Hr1G089940.11 , HORVU2Hr1G089940.12 , HORVU2Hr1G089940.13 , HORVU6Hr1G058930.20 , HORVU6Hr1G058930.21 , HORVU2Hr1G089940.20 , HORVU6Hr1G058930.19 , HORVU6Hr1G058930.18 , HORVU6Hr1G058930.11 , HORVU6Hr1G058930.10 , HORVU6Hr1G058930.13 , HORVU6Hr1G058930.12 , HORVU6Hr1G058930.15 , HORVU6Hr1G058930.14 , HORVU6Hr1G058930.17 , HORVU6Hr1G058930.16
Wheat TraesCS2D02G376100 , TraesCS5D02G185400 , TraesCS2A02G198500 , TraesCS6B02G259000 , TraesCS4A02G286200 , TraesCS5B02G332500 , TraesCS2D02G206300 , TraesCS7A02G191200 , TraesCS4B02G027600 , TraesCS6D02G212900 , TraesCS5B02G178700 , TraesCS7D02G192200 , TraesCS2D02G404800 , TraesCS2B02G425600 , TraesCS5A02G181000 , TraesCS2D02G376000 , TraesCS2D02G376000 , TraesCS2A02G379900 , TraesCS5D02G338200 , TraesCS2D02G404800 , TraesCS2B02G396700 , TraesCS2B02G396700 , TraesCS5A02G332300 , TraesCS6A02G222100 , TraesCS2B02G396800 , TraesCS2B02G225900 , TraesCS2A02G407700 , TraesCS2A02G407700 , TraesCS2A02G065700 , TraesCS7B02G096000 , TraesCS2D02G063900 , TraesCS2A02G379800
Populus -


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cDNA sequences
Sobic.002G281000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G525900 homeobox domain containing protein, expressed -
2 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
3 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
4 Sobic.009G202400 expressed protein -
5 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
6 Sobic.005G097800 eukaryotic aspartyl protease domain containing protein, expressed -
7 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
8 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
9 Sobic.005G021600 expressed protein -
10 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
11 Sobic.001G321600 dehydration response related protein, putative, expressed -
12 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
13 Sobic.008G073400 B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
14 Sobic.001G048000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G106500 expressed protein -
16 Sobic.002G371900 DC1 domain-containing protein, putative, expressed -
17 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
18 Sobic.002G001800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
19 Sobic.003G292600 HPT phosphotransmitter 4(PubMedID : 26465154)@Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
20 Sobic.010G089200 expressed protein -


Gene co-expression network
sample Sobic002G281000 Sobic002G281000 Sobic001G525900 Sobic001G525900 Sobic002G281000--Sobic001G525900 Sobic001G019300 Sobic001G019300 Sobic002G281000--Sobic001G019300 Sobic008G063100 Sobic008G063100 Sobic002G281000--Sobic008G063100 Sobic009G202400 Sobic009G202400 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic004G063200 Sobic004G063200 Sobic002G281000--Sobic004G063200 Sobic001G404500 Sobic001G404500 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600 Sobic001G525900--Sobic002G281000 Sobic001G525900--Sobic001G404500 Sobic001G525900--Sobic001G019300 Sobic001G525900--Sobic005G021600 Sobic006G164300 Sobic006G164300 Sobic001G525900--Sobic006G164300 Sobic001G048000 Sobic001G048000 Sobic001G525900--Sobic001G048000 Sobic001G525900--Sobic008G063100 Sobic001G525900--Sobic004G063200 Sobic001G321600 Sobic001G321600 Sobic001G525900--Sobic001G321600 Sobic002G265400 Sobic002G265400 Sobic001G019300--Sobic002G265400 Sobic001G019300--Sobic002G281000 Sobic005G063900 Sobic005G063900 Sobic001G019300--Sobic005G063900 Sobic001G019300--Sobic001G321600 Sobic001G005500 Sobic001G005500 Sobic001G019300--Sobic001G005500 Sobic008G073400 Sobic008G073400 Sobic001G019300--Sobic008G073400 Sobic001G019300--Sobic002G195700 Sobic005G190900 Sobic005G190900 Sobic001G019300--Sobic005G190900 Sobic001G198700 Sobic001G198700 Sobic001G019300--Sobic001G198700 Sobic004G343100 Sobic004G343100 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic008G063100--Sobic001G404500 Sobic008G063100--Sobic001G198700 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic007G037800 Sobic007G037800 Sobic009G202400--Sobic007G037800 Sobic009G202400--Sobic002G281000 Sobic004G210601 Sobic004G210601 Sobic009G202400--Sobic004G210601 Sobic009G202400--Sobic005G097800 Sobic005G192600 Sobic005G192600 Sobic009G202400--Sobic005G192600 Sobic005G167500 Sobic005G167500 Sobic009G202400--Sobic005G167500 Sobic005G093300 Sobic005G093300 Sobic009G202400--Sobic005G093300 Sobic009G202400--Sobic008G063100 Sobic004G019400 Sobic004G019400 Sobic009G202400--Sobic004G019400 Sobic002G195700--Sobic001G005500 Sobic002G195700--Sobic008G073400 Sobic002G195700--Sobic001G321600 Sobic002G195700--Sobic001G019300 Sobic002G366100 Sobic002G366100 Sobic002G195700--Sobic002G366100 Sobic002G195700--Sobic002G281000 Sobic002G195700--Sobic005G021600 Sobic006G269400 Sobic006G269400 Sobic002G195700--Sobic006G269400 Sobic002G195700--Sobic001G198700 Sobic005G097800--Sobic002G281000 Sobic005G097800--Sobic009G202400 Sobic005G220900 Sobic005G220900 Sobic005G097800--Sobic005G220900 Sobic005G097800--Sobic001G404500 Sobic005G097800--Sobic002G265400 Sobic003G292600 Sobic003G292600 Sobic005G097800--Sobic003G292600 Sobic005G097800--Sobic008G063100 Sobic010G225600 Sobic010G225600 Sobic005G097800--Sobic010G225600 Sobic006G135100 Sobic006G135100 Sobic005G097800--Sobic006G135100 Sobic004G063200--Sobic002G265400 Sobic004G063200--Sobic001G404500 Sobic004G063200--Sobic002G281000 Sobic006G060800 Sobic006G060800 Sobic004G063200--Sobic006G060800 Sobic009G189000 Sobic009G189000 Sobic004G063200--Sobic009G189000 Sobic004G063200--Sobic001G198700 Sobic004G063200--Sobic008G063100 Sobic004G063200--Sobic001G019300 Sobic006G123500 Sobic006G123500 Sobic004G063200--Sobic006G123500 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic001G404500--Sobic002G281000 Sobic001G404500--Sobic008G063100 Sobic001G404500--Sobic001G525900 Sobic003G410900 Sobic003G410900 Sobic001G404500--Sobic003G410900 Sobic004G268500 Sobic004G268500 Sobic001G404500--Sobic004G268500 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700 Sobic005G021600--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic005G021600--Sobic010G265500 Sobic009G028400 Sobic009G028400 Sobic005G021600--Sobic009G028400 Sobic005G021600--Sobic002G195700 Sobic007G178500 Sobic007G178500 Sobic005G021600--Sobic007G178500 Sobic010G218600 Sobic010G218600 Sobic005G021600--Sobic010G218600 Sobic005G021600--Sobic002G281000 Sobic007G132500 Sobic007G132500 Sobic005G021600--Sobic007G132500 Sobic001G006000 Sobic001G006000 Sobic005G021600--Sobic001G006000
Octagon: transcription factors


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