Gene annotation
Transcriptome id Sobic.004G063200.1
Synonym SbBBX7, FG, B-box (BBX) protein, Sb04g005250, CO
Functional annotation B-box (BBX) protein (PubMedID : 30626335)
CCT/B-box zinc finger protein, putative, expressed
UniProt A0A1Z5RM83
Pfam PF00643 PF06203
Panther DB PTHR31319 PTHR31319:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005622intracellular GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT5G24930 : CONSTANS-like 4
RAP-DB (Rice) LOC_Os06g44450.1 : CCT/B-box zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a019184 , Zm00025a056392 , Zm00025a021217
Brachypodium KQK16890
Barley -
Wheat TraesCS6D02G140900 , TraesCS6D02G140900 , TraesCS7B02G400600 , TraesCS6A02G150900 , TraesCS6A02G150900 , TraesCS6B02G179000 , TraesCS6B02G179000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
2 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
3 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
4 Sobic.006G060800 basic proline-rich protein, putative, expressed -
5 Sobic.009G189000 expressed protein -
6 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
7 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
8 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
9 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
10 Sobic.001G525900 homeobox domain containing protein, expressed -
11 Sobic.002G371900 DC1 domain-containing protein, putative, expressed -
12 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
13 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
14 Sobic.003G410900 CRAL/TRIO domain containing protein, expressed -
15 Sobic.003G096500 protein kinase domain containing protein, expressed -
16 Sobic.001G145050 - -
17 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.009G202400 expressed protein -
19 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.002G257100 regulatory protein, putative, expressed -


Gene co-expression network
sample Sobic004G063200 Sobic004G063200 Sobic002G265400 Sobic002G265400 Sobic004G063200--Sobic002G265400 Sobic001G404500 Sobic001G404500 Sobic004G063200--Sobic001G404500 Sobic002G281000 Sobic002G281000 Sobic004G063200--Sobic002G281000 Sobic006G060800 Sobic006G060800 Sobic004G063200--Sobic006G060800 Sobic009G189000 Sobic009G189000 Sobic004G063200--Sobic009G189000 Sobic001G198700 Sobic001G198700 Sobic004G063200--Sobic001G198700 Sobic008G063100 Sobic008G063100 Sobic004G063200--Sobic008G063100 Sobic001G019300 Sobic001G019300 Sobic004G063200--Sobic001G019300 Sobic006G123500 Sobic006G123500 Sobic004G063200--Sobic006G123500 Sobic002G265400--Sobic001G019300 Sobic002G265400--Sobic004G063200 Sobic005G063900 Sobic005G063900 Sobic002G265400--Sobic005G063900 Sobic002G265400--Sobic002G281000 Sobic002G265400--Sobic001G198700 Sobic005G190900 Sobic005G190900 Sobic002G265400--Sobic005G190900 Sobic009G202400 Sobic009G202400 Sobic002G265400--Sobic009G202400 Sobic002G371900 Sobic002G371900 Sobic002G265400--Sobic002G371900 Sobic009G252100 Sobic009G252100 Sobic002G265400--Sobic009G252100 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic001G404500--Sobic002G281000 Sobic001G404500--Sobic008G063100 Sobic001G525900 Sobic001G525900 Sobic001G404500--Sobic001G525900 Sobic003G410900 Sobic003G410900 Sobic001G404500--Sobic003G410900 Sobic004G268500 Sobic004G268500 Sobic001G404500--Sobic004G268500 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700 Sobic002G281000--Sobic001G525900 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600 Sobic008G060300 Sobic008G060300 Sobic006G060800--Sobic008G060300 Sobic006G060800--Sobic009G252100 Sobic002G041800 Sobic002G041800 Sobic006G060800--Sobic002G041800 Sobic006G060800--Sobic004G063200 Sobic001G201800 Sobic001G201800 Sobic006G060800--Sobic001G201800 Sobic004G078600 Sobic004G078600 Sobic006G060800--Sobic004G078600 Sobic007G089300 Sobic007G089300 Sobic006G060800--Sobic007G089300 Sobic001G145050 Sobic001G145050 Sobic006G060800--Sobic001G145050 Sobic002G366100 Sobic002G366100 Sobic006G060800--Sobic002G366100 Sobic009G189000--Sobic004G063200 Sobic010G214000 Sobic010G214000 Sobic009G189000--Sobic010G214000 Sobic003G108600 Sobic003G108600 Sobic009G189000--Sobic003G108600 Sobic009G189000--Sobic001G404500 Sobic009G023401 Sobic009G023401 Sobic009G189000--Sobic009G023401 Sobic001G351400 Sobic001G351400 Sobic009G189000--Sobic001G351400 Sobic009G189000--Sobic002G265400 Sobic001G005500 Sobic001G005500 Sobic009G189000--Sobic001G005500 Sobic010G063200 Sobic010G063200 Sobic009G189000--Sobic010G063200 Sobic003G106500 Sobic003G106500 Sobic001G198700--Sobic003G106500 Sobic001G198700--Sobic001G019300 Sobic001G198700--Sobic002G265400 Sobic001G198700--Sobic002G195700 Sobic001G198700--Sobic008G063100 Sobic001G198700--Sobic004G063200 Sobic005G093300 Sobic005G093300 Sobic001G198700--Sobic005G093300 Sobic001G198700--Sobic002G371900 Sobic001G198700--Sobic004G078600 Sobic004G343100 Sobic004G343100 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic008G063100--Sobic001G404500 Sobic008G063100--Sobic001G198700 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic001G019300--Sobic002G265400 Sobic001G019300--Sobic002G281000 Sobic001G019300--Sobic005G063900 Sobic001G321600 Sobic001G321600 Sobic001G019300--Sobic001G321600 Sobic001G019300--Sobic001G005500 Sobic008G073400 Sobic008G073400 Sobic001G019300--Sobic008G073400 Sobic001G019300--Sobic002G195700 Sobic001G019300--Sobic005G190900 Sobic001G019300--Sobic001G198700 Sobic006G123500--Sobic004G268500 Sobic006G123500--Sobic001G404500 Sobic006G123500--Sobic004G099700 Sobic005G187900 Sobic005G187900 Sobic006G123500--Sobic005G187900 Sobic003G284800 Sobic003G284800 Sobic006G123500--Sobic003G284800 Sobic002G046900 Sobic002G046900 Sobic006G123500--Sobic002G046900 Sobic006G123500--Sobic004G063200 Sobic008G065200 Sobic008G065200 Sobic006G123500--Sobic008G065200 Sobic002G001900 Sobic002G001900 Sobic006G123500--Sobic002G001900
Octagon: transcription factors


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