Gene annotation
Transcriptome id Sobic.003G410900.1
Synonym Sb03g044540
Functional annotation CRAL/TRIO domain containing protein, expressed
UniProt C5XGZ2
Pfam PF03765 PF00650
Panther DB PTHR10174 PTHR10174:SF140
NCBI CDD KOG1471; Phosphatidylinositol transfer protein SEC14 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01630 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os01g70210.1 : CRAL/TRIO domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026202 , Zm00025a026201 , Zm00025a023026
Brachypodium KQK11316
Barley HORVU3Hr1G096280.5 , HORVU3Hr1G096280.6 , HORVU5Hr1G121860.3 , HORVU5Hr1G121860.2 , HORVU5Hr1G121860.1 , HORVU5Hr1G121860.5 , HORVU3Hr1G096290.8 , HORVU3Hr1G096290.7 , HORVU3Hr1G096290.6 , HORVU3Hr1G096290.3 , HORVU3Hr1G096290.2 , HORVU3Hr1G096290.1 , HORVU3Hr1G096290.5 , HORVU3Hr1G096290.4 , HORVU3Hr1G096280.4 , HORVU3Hr1G096280.1 , HORVU3Hr1G096280.2 , HORVU3Hr1G096280.3
Wheat TraesCS3A02G441100 , TraesCS3A02G441100 , TraesCS3A02G441000 , TraesCS3B02G475100 , TraesCS5D02G538300 , TraesCS4A02G333800 , TraesCS5B02G551900 , TraesCS3A02G440900 , TraesCS3D02G433800 , TraesCS3D02G433700
Populus -


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cDNA sequences
Sobic.003G410900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
2 Sobic.006G060800 basic proline-rich protein, putative, expressed -
3 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
4 Sobic.003G096500 protein kinase domain containing protein, expressed -
5 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
6 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
8 Sobic.009G189000 expressed protein -
9 Sobic.006G164300 YELLOW STRIPE like 2(PubMedID : 26465154)@- -
10 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
11 Sobic.002G362100 expressed protein -
12 Sobic.005G175600 TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.005G045200 homeobox domain containing protein, expressed -
14 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
15 Sobic.005G203300 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
16 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
17 Sobic.001G145050 - -
18 Sobic.008G065200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor protein kinase, putative, expressed -
19 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
20 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1


Gene co-expression network
sample Sobic003G410900 Sobic003G410900 Sobic001G404500 Sobic001G404500 Sobic003G410900--Sobic001G404500 Sobic006G060800 Sobic006G060800 Sobic003G410900--Sobic006G060800 Sobic004G063200 Sobic004G063200 Sobic003G410900--Sobic004G063200 Sobic003G096500 Sobic003G096500 Sobic003G410900--Sobic003G096500 Sobic001G351400 Sobic001G351400 Sobic003G410900--Sobic001G351400 Sobic004G099700 Sobic004G099700 Sobic003G410900--Sobic004G099700 Sobic006G123500 Sobic006G123500 Sobic003G410900--Sobic006G123500 Sobic009G189000 Sobic009G189000 Sobic003G410900--Sobic009G189000 Sobic006G164300 Sobic006G164300 Sobic003G410900--Sobic006G164300 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic002G281000 Sobic002G281000 Sobic001G404500--Sobic002G281000 Sobic008G063100 Sobic008G063100 Sobic001G404500--Sobic008G063100 Sobic001G525900 Sobic001G525900 Sobic001G404500--Sobic001G525900 Sobic001G404500--Sobic003G410900 Sobic004G268500 Sobic004G268500 Sobic001G404500--Sobic004G268500 Sobic001G404500--Sobic009G189000 Sobic001G404500--Sobic004G099700 Sobic008G060300 Sobic008G060300 Sobic006G060800--Sobic008G060300 Sobic009G252100 Sobic009G252100 Sobic006G060800--Sobic009G252100 Sobic002G041800 Sobic002G041800 Sobic006G060800--Sobic002G041800 Sobic006G060800--Sobic004G063200 Sobic001G201800 Sobic001G201800 Sobic006G060800--Sobic001G201800 Sobic004G078600 Sobic004G078600 Sobic006G060800--Sobic004G078600 Sobic007G089300 Sobic007G089300 Sobic006G060800--Sobic007G089300 Sobic001G145050 Sobic001G145050 Sobic006G060800--Sobic001G145050 Sobic002G366100 Sobic002G366100 Sobic006G060800--Sobic002G366100 Sobic002G265400 Sobic002G265400 Sobic004G063200--Sobic002G265400 Sobic004G063200--Sobic001G404500 Sobic004G063200--Sobic002G281000 Sobic004G063200--Sobic006G060800 Sobic004G063200--Sobic009G189000 Sobic001G198700 Sobic001G198700 Sobic004G063200--Sobic001G198700 Sobic004G063200--Sobic008G063100 Sobic001G019300 Sobic001G019300 Sobic004G063200--Sobic001G019300 Sobic004G063200--Sobic006G123500 Sobic003G096500--Sobic006G060800 Sobic003G096500--Sobic001G201800 Sobic004G019400 Sobic004G019400 Sobic003G096500--Sobic004G019400 Sobic003G096500--Sobic004G078600 Sobic003G096500--Sobic009G252100 Sobic003G096500--Sobic008G060300 Sobic003G096500--Sobic004G063200 Sobic005G193600 Sobic005G193600 Sobic003G096500--Sobic005G193600 Sobic003G096500--Sobic003G410900 Sobic006G258700 Sobic006G258700 Sobic001G351400--Sobic006G258700 Sobic001G351400--Sobic009G189000 Sobic001G102300 Sobic001G102300 Sobic001G351400--Sobic001G102300 Sobic002G362100 Sobic002G362100 Sobic001G351400--Sobic002G362100 Sobic010G207500 Sobic010G207500 Sobic001G351400--Sobic010G207500 Sobic001G351400--Sobic001G404500 Sobic010G184600 Sobic010G184600 Sobic001G351400--Sobic010G184600 Sobic001G351400--Sobic003G410900 Sobic001G351400--Sobic001G525900 Sobic004G099700--Sobic006G123500 Sobic004G099700--Sobic001G404500 Sobic007G025900 Sobic007G025900 Sobic004G099700--Sobic007G025900 Sobic004G099700--Sobic008G060300 Sobic004G099700--Sobic004G063200 Sobic004G099700--Sobic003G410900 Sobic008G065200 Sobic008G065200 Sobic004G099700--Sobic008G065200 Sobic004G099700--Sobic006G164300 Sobic010G193000 Sobic010G193000 Sobic004G099700--Sobic010G193000 Sobic006G123500--Sobic004G268500 Sobic006G123500--Sobic001G404500 Sobic006G123500--Sobic004G099700 Sobic005G187900 Sobic005G187900 Sobic006G123500--Sobic005G187900 Sobic003G284800 Sobic003G284800 Sobic006G123500--Sobic003G284800 Sobic002G046900 Sobic002G046900 Sobic006G123500--Sobic002G046900 Sobic006G123500--Sobic004G063200 Sobic006G123500--Sobic008G065200 Sobic002G001900 Sobic002G001900 Sobic006G123500--Sobic002G001900 Sobic009G189000--Sobic004G063200 Sobic010G214000 Sobic010G214000 Sobic009G189000--Sobic010G214000 Sobic003G108600 Sobic003G108600 Sobic009G189000--Sobic003G108600 Sobic009G189000--Sobic001G404500 Sobic009G023401 Sobic009G023401 Sobic009G189000--Sobic009G023401 Sobic009G189000--Sobic001G351400 Sobic009G189000--Sobic002G265400 Sobic001G005500 Sobic001G005500 Sobic009G189000--Sobic001G005500 Sobic010G063200 Sobic010G063200 Sobic009G189000--Sobic010G063200 Sobic006G164300--Sobic001G525900 Sobic006G164300--Sobic001G404500 Sobic005G203300 Sobic005G203300 Sobic006G164300--Sobic005G203300 Sobic006G164300--Sobic002G046900 Sobic006G164300--Sobic004G099700 Sobic006G164300--Sobic002G281000 Sobic009G202400 Sobic009G202400 Sobic006G164300--Sobic009G202400 Sobic006G164300--Sobic003G410900 Sobic005G175600 Sobic005G175600 Sobic006G164300--Sobic005G175600
Octagon: transcription factors


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