Gene annotation
Transcriptome id Sobic.004G099700.1
Synonym Sb04g008110
Functional annotation receptor-like protein kinase 5 precursor, putative, expressed
UniProt C5XYI3
Pfam PF08263 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF124
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G25930 : Protein kinase family protein with leucine-rich repeat domain
RAP-DB (Rice) LOC_Os02g13510.1 : receptor-like protein kinase 5 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020124 , Zm00025a018497 , Zm00025a001429 , Zm00025a051047 , Zm00025a034449 , Zm00025a030142 , Zm00025a042309 , Zm00025a029517 , Zm00025a014704
Brachypodium PNT63860 , KQJ88871 , KQK09670 , PNT72824 , KQJ94124 , KQJ95505
Barley HORVU4Hr1G065620.3 , HORVU4Hr1G065620.2 , HORVU4Hr1G065620.1 , HORVU0Hr1G022670.4 , HORVU0Hr1G022670.1 , HORVU0Hr1G022670.3 , HORVU0Hr1G022670.2 , HORVU1Hr1G025040.5 , HORVU1Hr1G025040.1 , HORVU3Hr1G070700.9 , HORVU3Hr1G070700.8 , HORVU3Hr1G070700.1 , HORVU3Hr1G070700.3 , HORVU3Hr1G070700.2 , HORVU3Hr1G070700.5 , HORVU3Hr1G070700.4 , HORVU3Hr1G070700.7 , HORVU3Hr1G070700.6 , HORVU3Hr1G070700.11 , HORVU3Hr1G070700.10 , HORVU4Hr1G051120.37 , HORVU4Hr1G051120.29 , HORVU4Hr1G051120.23 , HORVU4Hr1G051120.27 , HORVU4Hr1G051120.25 , HORVU1Hr1G025040.4 , HORVU1Hr1G025040.2 , HORVU1Hr1G025040.3 , HORVU5Hr1G001920.3 , HORVU5Hr1G001920.2 , HORVU5Hr1G001920.1
Wheat TraesCS3A02G276200 , TraesCS3A02G276200 , TraesCS3B02G310000 , TraesCS3B02G309900 , TraesCS7D02G365800 , TraesCS1B02G479300 , TraesCS1B02G479300 , TraesCS1B02G134100 , TraesCS7B02G270900 , TraesCS3D02G276100 , TraesCS1A02G113800 , TraesCS7A02G356900 , TraesCS4A02G059000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G099700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
2 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
3 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
4 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
5 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
6 Sobic.003G410900 CRAL/TRIO domain containing protein, expressed -
7 Sobic.008G065200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor protein kinase, putative, expressed -
8 Sobic.006G164300 YELLOW STRIPE like 2(PubMedID : 26465154)@- -
9 Sobic.010G193000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G366100 expressed protein -
11 Sobic.007G048200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@berberine and berberine like domain containing protein, expressed -
12 Sobic.003G255900 expressed protein -
13 Sobic.007G129201 - -
14 Sobic.006G060800 basic proline-rich protein, putative, expressed -
15 Sobic.005G187900 TKL_IRAK_DUF26-lh.5 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.005G203300 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
17 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
18 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
19 Sobic.005G193500 receptor-like kinase, putative, expressed -
20 Sobic.005G175600 TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic004G099700 Sobic004G099700 Sobic006G123500 Sobic006G123500 Sobic004G099700--Sobic006G123500 Sobic001G404500 Sobic001G404500 Sobic004G099700--Sobic001G404500 Sobic007G025900 Sobic007G025900 Sobic004G099700--Sobic007G025900 Sobic008G060300 Sobic008G060300 Sobic004G099700--Sobic008G060300 Sobic004G063200 Sobic004G063200 Sobic004G099700--Sobic004G063200 Sobic003G410900 Sobic003G410900 Sobic004G099700--Sobic003G410900 Sobic008G065200 Sobic008G065200 Sobic004G099700--Sobic008G065200 Sobic006G164300 Sobic006G164300 Sobic004G099700--Sobic006G164300 Sobic010G193000 Sobic010G193000 Sobic004G099700--Sobic010G193000 Sobic004G268500 Sobic004G268500 Sobic006G123500--Sobic004G268500 Sobic006G123500--Sobic001G404500 Sobic006G123500--Sobic004G099700 Sobic005G187900 Sobic005G187900 Sobic006G123500--Sobic005G187900 Sobic003G284800 Sobic003G284800 Sobic006G123500--Sobic003G284800 Sobic002G046900 Sobic002G046900 Sobic006G123500--Sobic002G046900 Sobic006G123500--Sobic004G063200 Sobic006G123500--Sobic008G065200 Sobic002G001900 Sobic002G001900 Sobic006G123500--Sobic002G001900 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic002G281000 Sobic002G281000 Sobic001G404500--Sobic002G281000 Sobic008G063100 Sobic008G063100 Sobic001G404500--Sobic008G063100 Sobic001G525900 Sobic001G525900 Sobic001G404500--Sobic001G525900 Sobic001G404500--Sobic003G410900 Sobic001G404500--Sobic004G268500 Sobic009G189000 Sobic009G189000 Sobic001G404500--Sobic009G189000 Sobic001G404500--Sobic004G099700 Sobic007G025900--Sobic004G099700 Sobic002G201900 Sobic002G201900 Sobic007G025900--Sobic002G201900 Sobic006G065900 Sobic006G065900 Sobic007G025900--Sobic006G065900 Sobic010G273700 Sobic010G273700 Sobic007G025900--Sobic010G273700 Sobic005G119100 Sobic005G119100 Sobic007G025900--Sobic005G119100 Sobic007G025900--Sobic008G060300 Sobic005G045200 Sobic005G045200 Sobic007G025900--Sobic005G045200 Sobic003G366100 Sobic003G366100 Sobic007G025900--Sobic003G366100 Sobic007G025900--Sobic001G404500 Sobic006G060800 Sobic006G060800 Sobic008G060300--Sobic006G060800 Sobic009G252100 Sobic009G252100 Sobic008G060300--Sobic009G252100 Sobic005G193600 Sobic005G193600 Sobic008G060300--Sobic005G193600 Sobic001G201800 Sobic001G201800 Sobic008G060300--Sobic001G201800 Sobic002G202700 Sobic002G202700 Sobic008G060300--Sobic002G202700 Sobic007G129201 Sobic007G129201 Sobic008G060300--Sobic007G129201 Sobic005G193500 Sobic005G193500 Sobic008G060300--Sobic005G193500 Sobic004G195800 Sobic004G195800 Sobic008G060300--Sobic004G195800 Sobic008G060300--Sobic003G366100 Sobic002G265400 Sobic002G265400 Sobic004G063200--Sobic002G265400 Sobic004G063200--Sobic001G404500 Sobic004G063200--Sobic002G281000 Sobic004G063200--Sobic006G060800 Sobic004G063200--Sobic009G189000 Sobic001G198700 Sobic001G198700 Sobic004G063200--Sobic001G198700 Sobic004G063200--Sobic008G063100 Sobic001G019300 Sobic001G019300 Sobic004G063200--Sobic001G019300 Sobic004G063200--Sobic006G123500 Sobic003G410900--Sobic001G404500 Sobic003G410900--Sobic006G060800 Sobic003G410900--Sobic004G063200 Sobic003G096500 Sobic003G096500 Sobic003G410900--Sobic003G096500 Sobic001G351400 Sobic001G351400 Sobic003G410900--Sobic001G351400 Sobic003G410900--Sobic004G099700 Sobic003G410900--Sobic006G123500 Sobic003G410900--Sobic009G189000 Sobic003G410900--Sobic006G164300 Sobic008G065200--Sobic004G268500 Sobic008G065200--Sobic010G193000 Sobic008G065200--Sobic006G123500 Sobic002G362100 Sobic002G362100 Sobic008G065200--Sobic002G362100 Sobic008G065200--Sobic001G404500 Sobic008G065200--Sobic004G099700 Sobic006G258700 Sobic006G258700 Sobic008G065200--Sobic006G258700 Sobic003G255900 Sobic003G255900 Sobic008G065200--Sobic003G255900 Sobic003G014300 Sobic003G014300 Sobic008G065200--Sobic003G014300 Sobic006G164300--Sobic001G525900 Sobic006G164300--Sobic001G404500 Sobic005G203300 Sobic005G203300 Sobic006G164300--Sobic005G203300 Sobic006G164300--Sobic002G046900 Sobic006G164300--Sobic004G099700 Sobic006G164300--Sobic002G281000 Sobic009G202400 Sobic009G202400 Sobic006G164300--Sobic009G202400 Sobic006G164300--Sobic003G410900 Sobic005G175600 Sobic005G175600 Sobic006G164300--Sobic005G175600 Sobic010G193000--Sobic005G203300 Sobic010G193000--Sobic008G065200 Sobic009G037200 Sobic009G037200 Sobic010G193000--Sobic009G037200 Sobic002G257100 Sobic002G257100 Sobic010G193000--Sobic002G257100 Sobic004G224500 Sobic004G224500 Sobic010G193000--Sobic004G224500 Sobic010G193000--Sobic004G099700 Sobic010G193000--Sobic001G404500 Sobic001G314900 Sobic001G314900 Sobic010G193000--Sobic001G314900 Sobic010G193000--Sobic002G046900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.