Gene annotation
Transcriptome id Sobic.001G404500.2,Sobic.001G404500.1
Synonym Sb01g038260
Functional annotation gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed
UniProt A0A1B6QNT3 , A0A1B6QNS4
Pfam PF03227
Panther DB PTHR13234 PTHR13234:SF8
NCBI CDD KOG3160; Gamma-interferon inducible lysosomal thiol reductase
KEGG Orthology K08059; IFI30, interferon, gamma-inducible protein 30
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07080 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os03g18454.1,LOC_Os03g18454.2 : gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a002024 , Zm00025a002023
Brachypodium -
Barley -
Wheat TraesCS4A02G112300 , TraesCS4A02G112300 , TraesCS4A02G112300 , TraesCS4A02G112300 , TraesCS4B02G191700 , TraesCS4B02G191700
Populus -


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cDNA sequences
Sobic.001G404500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
2 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
3 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
4 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
5 Sobic.001G525900 homeobox domain containing protein, expressed -
6 Sobic.003G410900 CRAL/TRIO domain containing protein, expressed -
7 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
8 Sobic.009G189000 expressed protein -
9 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
10 Sobic.005G175600 TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.005G097800 eukaryotic aspartyl protease domain containing protein, expressed -
12 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
13 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
14 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
15 Sobic.001G048000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
17 Sobic.001G314900 homeobox domain containing protein, expressed -
18 Sobic.006G164300 YELLOW STRIPE like 2(PubMedID : 26465154)@- -
19 Sobic.006G060800 basic proline-rich protein, putative, expressed -
20 Sobic.002G362100 expressed protein -


Gene co-expression network
sample Sobic001G404500 Sobic001G404500 Sobic006G123500 Sobic006G123500 Sobic001G404500--Sobic006G123500 Sobic004G063200 Sobic004G063200 Sobic001G404500--Sobic004G063200 Sobic002G281000 Sobic002G281000 Sobic001G404500--Sobic002G281000 Sobic008G063100 Sobic008G063100 Sobic001G404500--Sobic008G063100 Sobic001G525900 Sobic001G525900 Sobic001G404500--Sobic001G525900 Sobic003G410900 Sobic003G410900 Sobic001G404500--Sobic003G410900 Sobic004G268500 Sobic004G268500 Sobic001G404500--Sobic004G268500 Sobic009G189000 Sobic009G189000 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700 Sobic006G123500--Sobic004G268500 Sobic006G123500--Sobic001G404500 Sobic006G123500--Sobic004G099700 Sobic005G187900 Sobic005G187900 Sobic006G123500--Sobic005G187900 Sobic003G284800 Sobic003G284800 Sobic006G123500--Sobic003G284800 Sobic002G046900 Sobic002G046900 Sobic006G123500--Sobic002G046900 Sobic006G123500--Sobic004G063200 Sobic008G065200 Sobic008G065200 Sobic006G123500--Sobic008G065200 Sobic002G001900 Sobic002G001900 Sobic006G123500--Sobic002G001900 Sobic002G265400 Sobic002G265400 Sobic004G063200--Sobic002G265400 Sobic004G063200--Sobic001G404500 Sobic004G063200--Sobic002G281000 Sobic006G060800 Sobic006G060800 Sobic004G063200--Sobic006G060800 Sobic004G063200--Sobic009G189000 Sobic001G198700 Sobic001G198700 Sobic004G063200--Sobic001G198700 Sobic004G063200--Sobic008G063100 Sobic001G019300 Sobic001G019300 Sobic004G063200--Sobic001G019300 Sobic004G063200--Sobic006G123500 Sobic002G281000--Sobic001G525900 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic009G202400 Sobic009G202400 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600 Sobic004G343100 Sobic004G343100 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic008G063100--Sobic001G404500 Sobic008G063100--Sobic001G198700 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic001G525900--Sobic002G281000 Sobic001G525900--Sobic001G404500 Sobic001G525900--Sobic001G019300 Sobic001G525900--Sobic005G021600 Sobic006G164300 Sobic006G164300 Sobic001G525900--Sobic006G164300 Sobic001G048000 Sobic001G048000 Sobic001G525900--Sobic001G048000 Sobic001G525900--Sobic008G063100 Sobic001G525900--Sobic004G063200 Sobic001G321600 Sobic001G321600 Sobic001G525900--Sobic001G321600 Sobic003G410900--Sobic001G404500 Sobic003G410900--Sobic006G060800 Sobic003G410900--Sobic004G063200 Sobic003G096500 Sobic003G096500 Sobic003G410900--Sobic003G096500 Sobic001G351400 Sobic001G351400 Sobic003G410900--Sobic001G351400 Sobic003G410900--Sobic004G099700 Sobic003G410900--Sobic006G123500 Sobic003G410900--Sobic009G189000 Sobic003G410900--Sobic006G164300 Sobic004G268500--Sobic006G123500 Sobic004G268500--Sobic008G065200 Sobic004G268500--Sobic003G284800 Sobic004G268500--Sobic001G404500 Sobic001G071200 Sobic001G071200 Sobic004G268500--Sobic001G071200 Sobic003G292600 Sobic003G292600 Sobic004G268500--Sobic003G292600 Sobic004G268500--Sobic002G046900 Sobic002G025700 Sobic002G025700 Sobic004G268500--Sobic002G025700 Sobic002G362100 Sobic002G362100 Sobic004G268500--Sobic002G362100 Sobic009G189000--Sobic004G063200 Sobic010G214000 Sobic010G214000 Sobic009G189000--Sobic010G214000 Sobic003G108600 Sobic003G108600 Sobic009G189000--Sobic003G108600 Sobic009G189000--Sobic001G404500 Sobic009G023401 Sobic009G023401 Sobic009G189000--Sobic009G023401 Sobic009G189000--Sobic001G351400 Sobic009G189000--Sobic002G265400 Sobic001G005500 Sobic001G005500 Sobic009G189000--Sobic001G005500 Sobic010G063200 Sobic010G063200 Sobic009G189000--Sobic010G063200 Sobic004G099700--Sobic006G123500 Sobic004G099700--Sobic001G404500 Sobic007G025900 Sobic007G025900 Sobic004G099700--Sobic007G025900 Sobic008G060300 Sobic008G060300 Sobic004G099700--Sobic008G060300 Sobic004G099700--Sobic004G063200 Sobic004G099700--Sobic003G410900 Sobic004G099700--Sobic008G065200 Sobic004G099700--Sobic006G164300 Sobic010G193000 Sobic010G193000 Sobic004G099700--Sobic010G193000
Octagon: transcription factors


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