Gene annotation
Transcriptome id Sobic.005G097800.1
Synonym Sb05g008470
Functional annotation eukaryotic aspartyl protease domain containing protein, expressed
UniProt C5Y1N0
Pfam PF14541
Panther DB PTHR13683 PTHR13683:SF324
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G03200 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os01g50170.1 : eukaryotic aspartyl protease domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033960
Brachypodium KQK01807 , PNT69610
Barley HORVU3Hr1G022510.3 , HORVU3Hr1G022510.2 , HORVU3Hr1G022510.1
Wheat TraesCS3A02G120600 , TraesCS3D02G122900 , TraesCS2A02G162000
Populus -


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cDNA sequences
Sobic.005G097800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
2 Sobic.009G202400 expressed protein -
3 Sobic.005G220900 expressed protein -
4 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
5 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
6 Sobic.003G292600 HPT phosphotransmitter 4(PubMedID : 26465154)@Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
7 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
8 Sobic.010G225600 - -
9 Sobic.006G135100 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
10 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
11 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
12 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
13 Sobic.003G392700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
14 Sobic.001G525900 homeobox domain containing protein, expressed -
15 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
16 Sobic.001G068301 - K16189: phytochrome-interacting factor 4
17 Sobic.009G189000 expressed protein -
18 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
19 Sobic.002G395200 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.005G118300 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G097800 Sobic005G097800 Sobic002G281000 Sobic002G281000 Sobic005G097800--Sobic002G281000 Sobic009G202400 Sobic009G202400 Sobic005G097800--Sobic009G202400 Sobic005G220900 Sobic005G220900 Sobic005G097800--Sobic005G220900 Sobic001G404500 Sobic001G404500 Sobic005G097800--Sobic001G404500 Sobic002G265400 Sobic002G265400 Sobic005G097800--Sobic002G265400 Sobic003G292600 Sobic003G292600 Sobic005G097800--Sobic003G292600 Sobic008G063100 Sobic008G063100 Sobic005G097800--Sobic008G063100 Sobic010G225600 Sobic010G225600 Sobic005G097800--Sobic010G225600 Sobic006G135100 Sobic006G135100 Sobic005G097800--Sobic006G135100 Sobic001G525900 Sobic001G525900 Sobic002G281000--Sobic001G525900 Sobic001G019300 Sobic001G019300 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic002G281000--Sobic005G097800 Sobic004G063200 Sobic004G063200 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600 Sobic007G037800 Sobic007G037800 Sobic009G202400--Sobic007G037800 Sobic009G202400--Sobic002G281000 Sobic004G210601 Sobic004G210601 Sobic009G202400--Sobic004G210601 Sobic009G202400--Sobic005G097800 Sobic005G192600 Sobic005G192600 Sobic009G202400--Sobic005G192600 Sobic005G167500 Sobic005G167500 Sobic009G202400--Sobic005G167500 Sobic005G093300 Sobic005G093300 Sobic009G202400--Sobic005G093300 Sobic009G202400--Sobic008G063100 Sobic004G019400 Sobic004G019400 Sobic009G202400--Sobic004G019400 Sobic005G220900--Sobic005G097800 Sobic005G220900--Sobic003G292600 Sobic004G268500 Sobic004G268500 Sobic005G220900--Sobic004G268500 Sobic005G220900--Sobic009G202400 Sobic005G220900--Sobic002G281000 Sobic006G123500 Sobic006G123500 Sobic005G220900--Sobic006G123500 Sobic002G395200 Sobic002G395200 Sobic005G220900--Sobic002G395200 Sobic006G131800 Sobic006G131800 Sobic005G220900--Sobic006G131800 Sobic001G068301 Sobic001G068301 Sobic005G220900--Sobic001G068301 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic001G404500--Sobic002G281000 Sobic001G404500--Sobic008G063100 Sobic001G404500--Sobic001G525900 Sobic003G410900 Sobic003G410900 Sobic001G404500--Sobic003G410900 Sobic001G404500--Sobic004G268500 Sobic009G189000 Sobic009G189000 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700 Sobic002G265400--Sobic001G019300 Sobic002G265400--Sobic004G063200 Sobic005G063900 Sobic005G063900 Sobic002G265400--Sobic005G063900 Sobic002G265400--Sobic002G281000 Sobic001G198700 Sobic001G198700 Sobic002G265400--Sobic001G198700 Sobic005G190900 Sobic005G190900 Sobic002G265400--Sobic005G190900 Sobic002G265400--Sobic009G202400 Sobic002G371900 Sobic002G371900 Sobic002G265400--Sobic002G371900 Sobic009G252100 Sobic009G252100 Sobic002G265400--Sobic009G252100 Sobic003G292600--Sobic001G525900 Sobic003G292600--Sobic004G268500 Sobic003G292600--Sobic002G281000 Sobic009G034600 Sobic009G034600 Sobic003G292600--Sobic009G034600 Sobic003G292600--Sobic005G097800 Sobic003G292600--Sobic001G404500 Sobic001G102300 Sobic001G102300 Sobic003G292600--Sobic001G102300 Sobic010G241300 Sobic010G241300 Sobic003G292600--Sobic010G241300 Sobic001G048000 Sobic001G048000 Sobic003G292600--Sobic001G048000 Sobic004G343100 Sobic004G343100 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic008G063100--Sobic001G404500 Sobic008G063100--Sobic001G198700 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic010G225600--Sobic009G202400 Sobic003G108600 Sobic003G108600 Sobic010G225600--Sobic003G108600 Sobic010G225600--Sobic005G097800 Sobic010G225600--Sobic006G135100 Sobic005G127000 Sobic005G127000 Sobic010G225600--Sobic005G127000 Sobic010G225600--Sobic001G068301 Sobic001G317400 Sobic001G317400 Sobic010G225600--Sobic001G317400 Sobic001G391900 Sobic001G391900 Sobic010G225600--Sobic001G391900 Sobic003G068800 Sobic003G068800 Sobic010G225600--Sobic003G068800 Sobic010G214000 Sobic010G214000 Sobic006G135100--Sobic010G214000 Sobic005G015200 Sobic005G015200 Sobic006G135100--Sobic005G015200 Sobic008G015100 Sobic008G015100 Sobic006G135100--Sobic008G015100 Sobic006G135100--Sobic005G097800 Sobic006G135100--Sobic010G225600 Sobic010G096300 Sobic010G096300 Sobic006G135100--Sobic010G096300 Sobic003G088800 Sobic003G088800 Sobic006G135100--Sobic003G088800 Sobic006G135100--Sobic009G202400 Sobic005G055900 Sobic005G055900 Sobic006G135100--Sobic005G055900
Octagon: transcription factors


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