Gene annotation
Transcriptome id Sobic.003G292600.2,Sobic.003G292600.1
Synonym AHP4, Sb03g034300,Positive cytokinine regulator
Functional annotation HPT phosphotransmitter 4 (PubMedID : 26465154)
Positive cytokinine regulator (PubMedID : 30367619)
histidine-containing phosphotransfer protein, putative, expressed
UniProt A0A1W0VZF5 , C5XK04
Pfam PF01627
Panther DB PTHR28242 PTHR28242:SF12
NCBI CDD KOG4747; Two-component phosphorelay intermediate involved in MAP kinase cascade regulation
KEGG Orthology K14490; histidine-containing phosphotransfer peotein
Gene Ontology GO:0004871; obsolete signal transducer activity GO:0000160phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT3G16360 : HPT phosphotransmitter 4
RAP-DB (Rice) LOC_Os01g54050.1 : histidine-containing phosphotransfer protein, putative, expressed
MaizeGDB (Corn) Zm00025a027639
Brachypodium KQK09692 , KQK09691
Barley HORVU3Hr1G070880.9 , HORVU3Hr1G070880.2 , HORVU3Hr1G070880.1 , HORVU3Hr1G070880.6 , HORVU3Hr1G070880.7 , HORVU3Hr1G070880.11 , HORVU3Hr1G070880.12 , HORVU3Hr1G070880.13 , HORVU3Hr1G070880.15 , HORVU3Hr1G070880.16 , HORVU3Hr1G070880.10
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G525900 homeobox domain containing protein, expressed -
2 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
3 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
4 Sobic.009G034600 expressed protein -
5 Sobic.005G097800 eukaryotic aspartyl protease domain containing protein, expressed -
6 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
7 Sobic.001G102300 homeobox domain containing protein, expressed -
8 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -
9 Sobic.001G048000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.007G076900 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
11 Sobic.008G063200 expressed protein -
12 Sobic.005G220900 expressed protein -
13 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
14 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
15 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
16 Sobic.010G214000 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
17 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
18 Sobic.001G068301 - K16189: phytochrome-interacting factor 4
19 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
20 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase


Gene co-expression network
sample Sobic003G292600 Sobic003G292600 Sobic001G525900 Sobic001G525900 Sobic003G292600--Sobic001G525900 Sobic004G268500 Sobic004G268500 Sobic003G292600--Sobic004G268500 Sobic002G281000 Sobic002G281000 Sobic003G292600--Sobic002G281000 Sobic009G034600 Sobic009G034600 Sobic003G292600--Sobic009G034600 Sobic005G097800 Sobic005G097800 Sobic003G292600--Sobic005G097800 Sobic001G404500 Sobic001G404500 Sobic003G292600--Sobic001G404500 Sobic001G102300 Sobic001G102300 Sobic003G292600--Sobic001G102300 Sobic010G241300 Sobic010G241300 Sobic003G292600--Sobic010G241300 Sobic001G048000 Sobic001G048000 Sobic003G292600--Sobic001G048000 Sobic001G525900--Sobic002G281000 Sobic001G525900--Sobic001G404500 Sobic001G019300 Sobic001G019300 Sobic001G525900--Sobic001G019300 Sobic005G021600 Sobic005G021600 Sobic001G525900--Sobic005G021600 Sobic006G164300 Sobic006G164300 Sobic001G525900--Sobic006G164300 Sobic001G525900--Sobic001G048000 Sobic008G063100 Sobic008G063100 Sobic001G525900--Sobic008G063100 Sobic004G063200 Sobic004G063200 Sobic001G525900--Sobic004G063200 Sobic001G321600 Sobic001G321600 Sobic001G525900--Sobic001G321600 Sobic006G123500 Sobic006G123500 Sobic004G268500--Sobic006G123500 Sobic008G065200 Sobic008G065200 Sobic004G268500--Sobic008G065200 Sobic003G284800 Sobic003G284800 Sobic004G268500--Sobic003G284800 Sobic004G268500--Sobic001G404500 Sobic001G071200 Sobic001G071200 Sobic004G268500--Sobic001G071200 Sobic004G268500--Sobic003G292600 Sobic002G046900 Sobic002G046900 Sobic004G268500--Sobic002G046900 Sobic002G025700 Sobic002G025700 Sobic004G268500--Sobic002G025700 Sobic002G362100 Sobic002G362100 Sobic004G268500--Sobic002G362100 Sobic002G281000--Sobic001G525900 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic009G202400 Sobic009G202400 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic002G281000--Sobic005G097800 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic002G281000--Sobic005G021600 Sobic008G063200 Sobic008G063200 Sobic009G034600--Sobic008G063200 Sobic003G421400 Sobic003G421400 Sobic009G034600--Sobic003G421400 Sobic010G269400 Sobic010G269400 Sobic009G034600--Sobic010G269400 Sobic009G034600--Sobic001G102300 Sobic009G034600--Sobic003G292600 Sobic006G258700 Sobic006G258700 Sobic009G034600--Sobic006G258700 Sobic006G188000 Sobic006G188000 Sobic009G034600--Sobic006G188000 Sobic010G207500 Sobic010G207500 Sobic009G034600--Sobic010G207500 Sobic009G034600--Sobic010G241300 Sobic005G097800--Sobic002G281000 Sobic005G097800--Sobic009G202400 Sobic005G220900 Sobic005G220900 Sobic005G097800--Sobic005G220900 Sobic005G097800--Sobic001G404500 Sobic002G265400 Sobic002G265400 Sobic005G097800--Sobic002G265400 Sobic005G097800--Sobic003G292600 Sobic005G097800--Sobic008G063100 Sobic010G225600 Sobic010G225600 Sobic005G097800--Sobic010G225600 Sobic006G135100 Sobic006G135100 Sobic005G097800--Sobic006G135100 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic001G404500--Sobic002G281000 Sobic001G404500--Sobic008G063100 Sobic001G404500--Sobic001G525900 Sobic003G410900 Sobic003G410900 Sobic001G404500--Sobic003G410900 Sobic001G404500--Sobic004G268500 Sobic009G189000 Sobic009G189000 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700 Sobic001G102300--Sobic009G034600 Sobic003G108600 Sobic003G108600 Sobic001G102300--Sobic003G108600 Sobic003G068800 Sobic003G068800 Sobic001G102300--Sobic003G068800 Sobic010G214000 Sobic010G214000 Sobic001G102300--Sobic010G214000 Sobic004G096100 Sobic004G096100 Sobic001G102300--Sobic004G096100 Sobic001G351400 Sobic001G351400 Sobic001G102300--Sobic001G351400 Sobic001G300201 Sobic001G300201 Sobic001G102300--Sobic001G300201 Sobic004G359200 Sobic004G359200 Sobic001G102300--Sobic004G359200 Sobic001G102300--Sobic003G292600 Sobic008G183200 Sobic008G183200 Sobic010G241300--Sobic008G183200 Sobic007G059500 Sobic007G059500 Sobic010G241300--Sobic007G059500 Sobic005G127000 Sobic005G127000 Sobic010G241300--Sobic005G127000 Sobic004G122200 Sobic004G122200 Sobic010G241300--Sobic004G122200 Sobic003G397200 Sobic003G397200 Sobic010G241300--Sobic003G397200 Sobic006G010800 Sobic006G010800 Sobic010G241300--Sobic006G010800 Sobic010G241300--Sobic009G034600 Sobic005G111500 Sobic005G111500 Sobic010G241300--Sobic005G111500 Sobic007G213300 Sobic007G213300 Sobic010G241300--Sobic007G213300 Sobic001G048000--Sobic001G525900 Sobic001G048000--Sobic002G281000 Sobic001G048000--Sobic001G404500 Sobic005G175600 Sobic005G175600 Sobic001G048000--Sobic005G175600 Sobic002G366100 Sobic002G366100 Sobic001G048000--Sobic002G366100 Sobic001G048000--Sobic003G292600 Sobic001G005500 Sobic001G005500 Sobic001G048000--Sobic001G005500 Sobic001G048000--Sobic005G127000 Sobic001G048000--Sobic002G195700
Octagon: transcription factors


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