Gene annotation
Transcriptome id Sobic.001G102300.1
Synonym Sb01g009130, SAW2, BLH4
Functional annotation homeobox domain containing protein, expressed
UniProt C5WLY0
Pfam PF05920 PF07526
Panther DB PTHR11850 PTHR11850:SF66
NCBI CDD KOG0773; Transcription factor MEIS1 and related HOX domain proteins
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G23760 : BEL1-like homeodomain 4
RAP-DB (Rice) LOC_Os03g52239.1 : homeobox domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008024 , Zm00025a051010 , Zm00025a034143 , Zm00025a000326
Brachypodium KQK13360 , KQK23910 , KQK23911 , KQK23909 , KQK05949 , KQK05948 , PNT74190 , KQJ97586 , KQK20028 , PNT76714 , KQK13359
Barley HORVU4Hr1G010430.7 , HORVU4Hr1G010430.4 , HORVU4Hr1G010430.8 , HORVU4Hr1G010430.9 , HORVU4Hr1G010430.2 , HORVU4Hr1G010430.3 , HORVU4Hr1G010430.1 , HORVU4Hr1G010430.6 , HORVU4Hr1G010430.5 , HORVU3Hr1G085720.7 , HORVU3Hr1G085720.6 , HORVU3Hr1G085720.3 , HORVU3Hr1G085720.1 , HORVU3Hr1G085720.8 , HORVU3Hr1G072010.1 , HORVU4Hr1G010430.10 , HORVU4Hr1G010430.11 , HORVU1Hr1G049760.9 , HORVU1Hr1G049760.8 , HORVU1Hr1G049760.1 , HORVU1Hr1G049760.3 , HORVU1Hr1G049760.2 , HORVU1Hr1G049760.4 , HORVU1Hr1G049760.7 , HORVU1Hr1G049760.6
Wheat TraesCS4A02G252100 , TraesCS3A02G363900 , TraesCS3D02G357400 , TraesCS4B02G063100 , TraesCS4A02G252100 , TraesCS1B02G191800 , TraesCS4D02G062100 , TraesCS4D02G062100 , TraesCS1A02G183400 , TraesCS1D02G193800
Populus -


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cDNA sequences
Sobic.001G102300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G034600 expressed protein -
2 Sobic.003G108600 heat shock protein DnaJ, putative, expressed -
3 Sobic.003G068800 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
4 Sobic.010G214000 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
5 Sobic.004G096100 expressed protein -
6 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
7 Sobic.001G300201 - -
8 Sobic.004G359200 bZIP transcription factor domain containing protein, expressed -
9 Sobic.003G292600 HPT phosphotransmitter 4(PubMedID : 26465154)@Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
10 Sobic.001G525900 homeobox domain containing protein, expressed -
11 Sobic.001G098301 - -
12 Sobic.009G189000 expressed protein -
13 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
14 Sobic.010G052500 ZOS6-01 - C2H2 zinc finger protein, expressed -
15 Sobic.010G063200 zinc finger family protein, putative, expressed -
16 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
17 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G421400 expressed protein -
19 Sobic.010G225600 - -
20 Sobic.008G183200 LOL3, putative, expressed -


Gene co-expression network
sample Sobic001G102300 Sobic001G102300 Sobic009G034600 Sobic009G034600 Sobic001G102300--Sobic009G034600 Sobic003G108600 Sobic003G108600 Sobic001G102300--Sobic003G108600 Sobic003G068800 Sobic003G068800 Sobic001G102300--Sobic003G068800 Sobic010G214000 Sobic010G214000 Sobic001G102300--Sobic010G214000 Sobic004G096100 Sobic004G096100 Sobic001G102300--Sobic004G096100 Sobic001G351400 Sobic001G351400 Sobic001G102300--Sobic001G351400 Sobic001G300201 Sobic001G300201 Sobic001G102300--Sobic001G300201 Sobic004G359200 Sobic004G359200 Sobic001G102300--Sobic004G359200 Sobic003G292600 Sobic003G292600 Sobic001G102300--Sobic003G292600 Sobic008G063200 Sobic008G063200 Sobic009G034600--Sobic008G063200 Sobic003G421400 Sobic003G421400 Sobic009G034600--Sobic003G421400 Sobic010G269400 Sobic010G269400 Sobic009G034600--Sobic010G269400 Sobic009G034600--Sobic001G102300 Sobic009G034600--Sobic003G292600 Sobic006G258700 Sobic006G258700 Sobic009G034600--Sobic006G258700 Sobic006G188000 Sobic006G188000 Sobic009G034600--Sobic006G188000 Sobic010G207500 Sobic010G207500 Sobic009G034600--Sobic010G207500 Sobic010G241300 Sobic010G241300 Sobic009G034600--Sobic010G241300 Sobic003G108600--Sobic010G214000 Sobic009G189000 Sobic009G189000 Sobic003G108600--Sobic009G189000 Sobic003G108600--Sobic003G068800 Sobic003G108600--Sobic001G102300 Sobic010G225600 Sobic010G225600 Sobic003G108600--Sobic010G225600 Sobic003G108600--Sobic006G258700 Sobic006G135100 Sobic006G135100 Sobic003G108600--Sobic006G135100 Sobic004G113800 Sobic004G113800 Sobic003G108600--Sobic004G113800 Sobic001G418700 Sobic001G418700 Sobic003G108600--Sobic001G418700 Sobic003G068800--Sobic003G108600 Sobic003G068800--Sobic001G102300 Sobic001G377500 Sobic001G377500 Sobic003G068800--Sobic001G377500 Sobic001G158900 Sobic001G158900 Sobic003G068800--Sobic001G158900 Sobic001G065600 Sobic001G065600 Sobic003G068800--Sobic001G065600 Sobic002G359600 Sobic002G359600 Sobic003G068800--Sobic002G359600 Sobic005G188600 Sobic005G188600 Sobic003G068800--Sobic005G188600 Sobic001G098301 Sobic001G098301 Sobic003G068800--Sobic001G098301 Sobic007G204900 Sobic007G204900 Sobic003G068800--Sobic007G204900 Sobic010G214000--Sobic003G108600 Sobic010G214000--Sobic009G189000 Sobic010G214000--Sobic001G102300 Sobic010G214000--Sobic006G135100 Sobic001G053900 Sobic001G053900 Sobic010G214000--Sobic001G053900 Sobic010G214000--Sobic003G068800 Sobic010G214000--Sobic006G258700 Sobic010G214000--Sobic001G351400 Sobic010G214000--Sobic003G292600 Sobic004G096100--Sobic001G102300 Sobic002G001800 Sobic002G001800 Sobic004G096100--Sobic002G001800 Sobic008G152200 Sobic008G152200 Sobic004G096100--Sobic008G152200 Sobic002G371900 Sobic002G371900 Sobic004G096100--Sobic002G371900 Sobic006G279400 Sobic006G279400 Sobic004G096100--Sobic006G279400 Sobic004G096100--Sobic009G034600 Sobic002G281000 Sobic002G281000 Sobic004G096100--Sobic002G281000 Sobic001G452700 Sobic001G452700 Sobic004G096100--Sobic001G452700 Sobic007G191900 Sobic007G191900 Sobic004G096100--Sobic007G191900 Sobic001G351400--Sobic006G258700 Sobic001G351400--Sobic009G189000 Sobic001G351400--Sobic001G102300 Sobic002G362100 Sobic002G362100 Sobic001G351400--Sobic002G362100 Sobic001G351400--Sobic010G207500 Sobic001G404500 Sobic001G404500 Sobic001G351400--Sobic001G404500 Sobic010G184600 Sobic010G184600 Sobic001G351400--Sobic010G184600 Sobic003G410900 Sobic003G410900 Sobic001G351400--Sobic003G410900 Sobic001G525900 Sobic001G525900 Sobic001G351400--Sobic001G525900 Sobic001G300201--Sobic001G102300 Sobic001G300201--Sobic004G359200 Sobic001G300201--Sobic003G068800 Sobic001G300201--Sobic010G214000 Sobic003G223400 Sobic003G223400 Sobic001G300201--Sobic003G223400 Sobic006G186500 Sobic006G186500 Sobic001G300201--Sobic006G186500 Sobic001G300201--Sobic001G418700 Sobic002G001900 Sobic002G001900 Sobic001G300201--Sobic002G001900 Sobic009G143500 Sobic009G143500 Sobic001G300201--Sobic009G143500 Sobic004G359200--Sobic001G102300 Sobic004G359200--Sobic001G300201 Sobic004G359200--Sobic003G108600 Sobic004G359200--Sobic001G351400 Sobic002G064750 Sobic002G064750 Sobic004G359200--Sobic002G064750 Sobic004G359200--Sobic010G214000 Sobic010G063200 Sobic010G063200 Sobic004G359200--Sobic010G063200 Sobic003G396300 Sobic003G396300 Sobic004G359200--Sobic003G396300 Sobic008G011200 Sobic008G011200 Sobic004G359200--Sobic008G011200 Sobic003G292600--Sobic001G525900 Sobic004G268500 Sobic004G268500 Sobic003G292600--Sobic004G268500 Sobic003G292600--Sobic002G281000 Sobic003G292600--Sobic009G034600 Sobic005G097800 Sobic005G097800 Sobic003G292600--Sobic005G097800 Sobic003G292600--Sobic001G404500 Sobic003G292600--Sobic001G102300 Sobic003G292600--Sobic010G241300 Sobic001G048000 Sobic001G048000 Sobic003G292600--Sobic001G048000
Octagon: transcription factors


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