Gene annotation
Transcriptome id Sobic.001G300201.2,Sobic.001G300201.3,Sobic.001G300201.1
Synonym -
Functional annotation -
UniProt A0A1Z5S8A5
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF173
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00050 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os10g40740.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013906 , Zm00025a046998 , Zm00025a049780 , Zm00025a003325
Brachypodium PNT67867 , PNT67866 , PNT67865 , KQJ97770 , KQJ90250 , KQJ90251 , PNT64574 , PNT64575 , PNT64576 , PNT64577 , KQJ90249 , KQJ90248 , KQK14025
Barley HORVU1Hr1G054260.20 , HORVU5Hr1G011780.15 , HORVU5Hr1G011780.10 , HORVU5Hr1G011780.11 , HORVU5Hr1G011780.12 , HORVU5Hr1G011780.13 , HORVU1Hr1G054260.8 , HORVU1Hr1G054260.9 , HORVU1Hr1G054260.2 , HORVU1Hr1G054260.3 , HORVU1Hr1G054260.1 , HORVU1Hr1G054260.6 , HORVU1Hr1G054260.4 , HORVU1Hr1G054260.5 , HORVU5Hr1G011780.5 , HORVU5Hr1G011780.3 , HORVU5Hr1G011780.1 , HORVU1Hr1G054260.18 , HORVU1Hr1G054260.19 , HORVU1Hr1G054260.10 , HORVU1Hr1G054260.11 , HORVU1Hr1G054260.12 , HORVU1Hr1G054260.13 , HORVU1Hr1G054260.14 , HORVU1Hr1G054260.15 , HORVU1Hr1G054260.16 , HORVU1Hr1G054260.17
Wheat TraesCS1D02G215600 , TraesCS1D02G215600 , TraesCS5D02G060300 , TraesCS1A02G212700 , TraesCS1A02G212700 , TraesCS5A02G225700 , TraesCS5A02G225700 , TraesCS1B02G226200 , TraesCS1B02G226200 , TraesCS5B02G224200 , TraesCS5B02G054800 , TraesCS5B02G054800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G102300 homeobox domain containing protein, expressed -
2 Sobic.004G359200 bZIP transcription factor domain containing protein, expressed -
3 Sobic.003G068800 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
4 Sobic.010G214000 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
5 Sobic.003G223400 down-regulated TF in developmental senescence(PubMedID : 27586543)@expressed protein K09422: transcription factor MYB, plant
6 Sobic.006G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed -
7 Sobic.001G418700 SLT1 protein, putative, expressed -
8 Sobic.002G001900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
9 Sobic.009G143500 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
10 Sobic.001G098301 - -
11 Sobic.001G054000 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
12 Sobic.007G167100 expressed protein K19373: DnaJ homolog subfamily C member 28
13 Sobic.003G108600 heat shock protein DnaJ, putative, expressed -
14 Sobic.004G174400 ZOS2-09 - C2H2 zinc finger protein, expressed -
15 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
16 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
17 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
18 Sobic.010G063200 zinc finger family protein, putative, expressed -
19 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
20 Sobic.002G005600 Aldolase-type TIM barrel family protein(PubMedID : 26465154)@SOR/SNZ family protein, putative, expressed K06215: pdxS, pyridoxal 5'-phosphate synthase pdxS subunit


Gene co-expression network
sample Sobic001G300201 Sobic001G300201 Sobic001G102300 Sobic001G102300 Sobic001G300201--Sobic001G102300 Sobic004G359200 Sobic004G359200 Sobic001G300201--Sobic004G359200 Sobic003G068800 Sobic003G068800 Sobic001G300201--Sobic003G068800 Sobic010G214000 Sobic010G214000 Sobic001G300201--Sobic010G214000 Sobic003G223400 Sobic003G223400 Sobic001G300201--Sobic003G223400 Sobic006G186500 Sobic006G186500 Sobic001G300201--Sobic006G186500 Sobic001G418700 Sobic001G418700 Sobic001G300201--Sobic001G418700 Sobic002G001900 Sobic002G001900 Sobic001G300201--Sobic002G001900 Sobic009G143500 Sobic009G143500 Sobic001G300201--Sobic009G143500 Sobic009G034600 Sobic009G034600 Sobic001G102300--Sobic009G034600 Sobic003G108600 Sobic003G108600 Sobic001G102300--Sobic003G108600 Sobic001G102300--Sobic003G068800 Sobic001G102300--Sobic010G214000 Sobic004G096100 Sobic004G096100 Sobic001G102300--Sobic004G096100 Sobic001G351400 Sobic001G351400 Sobic001G102300--Sobic001G351400 Sobic001G102300--Sobic001G300201 Sobic001G102300--Sobic004G359200 Sobic003G292600 Sobic003G292600 Sobic001G102300--Sobic003G292600 Sobic004G359200--Sobic001G102300 Sobic004G359200--Sobic001G300201 Sobic004G359200--Sobic003G108600 Sobic004G359200--Sobic001G351400 Sobic002G064750 Sobic002G064750 Sobic004G359200--Sobic002G064750 Sobic004G359200--Sobic010G214000 Sobic010G063200 Sobic010G063200 Sobic004G359200--Sobic010G063200 Sobic003G396300 Sobic003G396300 Sobic004G359200--Sobic003G396300 Sobic008G011200 Sobic008G011200 Sobic004G359200--Sobic008G011200 Sobic003G068800--Sobic003G108600 Sobic003G068800--Sobic001G102300 Sobic001G377500 Sobic001G377500 Sobic003G068800--Sobic001G377500 Sobic001G158900 Sobic001G158900 Sobic003G068800--Sobic001G158900 Sobic001G065600 Sobic001G065600 Sobic003G068800--Sobic001G065600 Sobic002G359600 Sobic002G359600 Sobic003G068800--Sobic002G359600 Sobic005G188600 Sobic005G188600 Sobic003G068800--Sobic005G188600 Sobic001G098301 Sobic001G098301 Sobic003G068800--Sobic001G098301 Sobic007G204900 Sobic007G204900 Sobic003G068800--Sobic007G204900 Sobic010G214000--Sobic003G108600 Sobic009G189000 Sobic009G189000 Sobic010G214000--Sobic009G189000 Sobic010G214000--Sobic001G102300 Sobic006G135100 Sobic006G135100 Sobic010G214000--Sobic006G135100 Sobic001G053900 Sobic001G053900 Sobic010G214000--Sobic001G053900 Sobic010G214000--Sobic003G068800 Sobic006G258700 Sobic006G258700 Sobic010G214000--Sobic006G258700 Sobic010G214000--Sobic001G351400 Sobic010G214000--Sobic003G292600 Sobic009G207900 Sobic009G207900 Sobic003G223400--Sobic009G207900 Sobic004G179400 Sobic004G179400 Sobic003G223400--Sobic004G179400 Sobic006G026100 Sobic006G026100 Sobic003G223400--Sobic006G026100 Sobic007G107700 Sobic007G107700 Sobic003G223400--Sobic007G107700 Sobic006G212800 Sobic006G212800 Sobic003G223400--Sobic006G212800 Sobic003G327000 Sobic003G327000 Sobic003G223400--Sobic003G327000 Sobic003G284800 Sobic003G284800 Sobic003G223400--Sobic003G284800 Sobic009G062400 Sobic009G062400 Sobic003G223400--Sobic009G062400 Sobic003G223400--Sobic002G001900 Sobic006G186500--Sobic009G143500 Sobic006G186500--Sobic004G179400 Sobic006G186500--Sobic009G207900 Sobic001G504400 Sobic001G504400 Sobic006G186500--Sobic001G504400 Sobic010G043800 Sobic010G043800 Sobic006G186500--Sobic010G043800 Sobic007G015500 Sobic007G015500 Sobic006G186500--Sobic007G015500 Sobic001G054000 Sobic001G054000 Sobic006G186500--Sobic001G054000 Sobic003G203300 Sobic003G203300 Sobic006G186500--Sobic003G203300 Sobic005G118400 Sobic005G118400 Sobic006G186500--Sobic005G118400 Sobic001G433000 Sobic001G433000 Sobic001G418700--Sobic001G433000 Sobic007G136800 Sobic007G136800 Sobic001G418700--Sobic007G136800 Sobic001G418700--Sobic001G065600 Sobic003G003600 Sobic003G003600 Sobic001G418700--Sobic003G003600 Sobic004G174400 Sobic004G174400 Sobic001G418700--Sobic004G174400 Sobic003G442700 Sobic003G442700 Sobic001G418700--Sobic003G442700 Sobic001G073900 Sobic001G073900 Sobic001G418700--Sobic001G073900 Sobic003G343500 Sobic003G343500 Sobic001G418700--Sobic003G343500 Sobic003G396200 Sobic003G396200 Sobic001G418700--Sobic003G396200 Sobic006G123500 Sobic006G123500 Sobic002G001900--Sobic006G123500 Sobic004G268500 Sobic004G268500 Sobic002G001900--Sobic004G268500 Sobic002G001900--Sobic003G223400 Sobic001G314400 Sobic001G314400 Sobic002G001900--Sobic001G314400 Sobic008G065200 Sobic008G065200 Sobic002G001900--Sobic008G065200 Sobic009G045600 Sobic009G045600 Sobic002G001900--Sobic009G045600 Sobic003G255900 Sobic003G255900 Sobic002G001900--Sobic003G255900 Sobic006G055000 Sobic006G055000 Sobic002G001900--Sobic006G055000 Sobic004G099700 Sobic004G099700 Sobic002G001900--Sobic004G099700 Sobic009G143500--Sobic006G186500 Sobic009G143500--Sobic007G015500 Sobic001G003200 Sobic001G003200 Sobic009G143500--Sobic001G003200 Sobic009G143500--Sobic009G207900 Sobic003G014300 Sobic003G014300 Sobic009G143500--Sobic003G014300 Sobic009G143500--Sobic003G343500 Sobic005G110532 Sobic005G110532 Sobic009G143500--Sobic005G110532 Sobic009G143500--Sobic006G258700 Sobic008G094000 Sobic008G094000 Sobic009G143500--Sobic008G094000
Octagon: transcription factors


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