Gene annotation
Transcriptome id Sobic.007G167100.1
Synonym Sb07g024000
Functional annotation expressed protein
UniProt A0A1Z5RAC1
Pfam PF09350
Panther DB PTHR24016
NCBI CDD -
KEGG Orthology K19373; DnaJ homolog subfamily C member 28
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03560 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os08g44650.1 : expressed protein
MaizeGDB (Corn) Zm00025a030529
Brachypodium KQJ88789
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G065600 expressed protein -
2 Sobic.004G181600 calmodulin binding protein, putative, expressed -
3 Sobic.010G002700 expressed protein -
4 Sobic.006G133900 NIN, putative, expressed -
5 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
6 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
7 Sobic.006G212800 expressed protein -
8 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
9 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
10 Sobic.005G118400 expressed protein -
11 Sobic.001G359300 cytochrome P450, putative, expressed -
12 Sobic.006G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed -
13 Sobic.003G203300 stress regulated protein, putative, expressed -
14 Sobic.001G077300 thioredoxin, putative, expressed -
15 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
16 Sobic.009G207900 expressed protein -
17 Sobic.001G540600 expressed protein -
18 Sobic.003G220100 - -
19 Sobic.004G178500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 7, putative, expressed K14486: K14486, auxin response factor
20 Sobic.007G160700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family


Gene co-expression network
sample Sobic007G167100 Sobic007G167100 Sobic006G065600 Sobic006G065600 Sobic007G167100--Sobic006G065600 Sobic004G181600 Sobic004G181600 Sobic007G167100--Sobic004G181600 Sobic010G002700 Sobic010G002700 Sobic007G167100--Sobic010G002700 Sobic006G133900 Sobic006G133900 Sobic007G167100--Sobic006G133900 Sobic005G179300 Sobic005G179300 Sobic007G167100--Sobic005G179300 Sobic001G169900 Sobic001G169900 Sobic007G167100--Sobic001G169900 Sobic006G212800 Sobic006G212800 Sobic007G167100--Sobic006G212800 Sobic004G042200 Sobic004G042200 Sobic007G167100--Sobic004G042200 Sobic003G343500 Sobic003G343500 Sobic007G167100--Sobic003G343500 Sobic006G065600--Sobic004G181600 Sobic006G065600--Sobic007G167100 Sobic006G065600--Sobic006G133900 Sobic002G104100 Sobic002G104100 Sobic006G065600--Sobic002G104100 Sobic008G130100 Sobic008G130100 Sobic006G065600--Sobic008G130100 Sobic001G454500 Sobic001G454500 Sobic006G065600--Sobic001G454500 Sobic007G193700 Sobic007G193700 Sobic006G065600--Sobic007G193700 Sobic004G178500 Sobic004G178500 Sobic006G065600--Sobic004G178500 Sobic001G365900 Sobic001G365900 Sobic006G065600--Sobic001G365900 Sobic004G181600--Sobic006G133900 Sobic004G181600--Sobic006G065600 Sobic004G181600--Sobic002G104100 Sobic005G075100 Sobic005G075100 Sobic004G181600--Sobic005G075100 Sobic004G181600--Sobic007G167100 Sobic004G181600--Sobic008G130100 Sobic006G219600 Sobic006G219600 Sobic004G181600--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic004G181600--Sobic003G155100 Sobic004G181600--Sobic004G178500 Sobic003G017100 Sobic003G017100 Sobic010G002700--Sobic003G017100 Sobic010G002700--Sobic001G169900 Sobic005G118400 Sobic005G118400 Sobic010G002700--Sobic005G118400 Sobic010G043800 Sobic010G043800 Sobic010G002700--Sobic010G043800 Sobic001G378100 Sobic001G378100 Sobic010G002700--Sobic001G378100 Sobic007G136200 Sobic007G136200 Sobic010G002700--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic010G002700--Sobic003G276300 Sobic001G198100 Sobic001G198100 Sobic010G002700--Sobic001G198100 Sobic001G530900 Sobic001G530900 Sobic010G002700--Sobic001G530900 Sobic006G133900--Sobic004G181600 Sobic006G133900--Sobic001G454500 Sobic006G133900--Sobic003G155100 Sobic006G133900--Sobic006G219600 Sobic003G370700 Sobic003G370700 Sobic006G133900--Sobic003G370700 Sobic006G133900--Sobic002G104100 Sobic006G133900--Sobic008G130100 Sobic006G133900--Sobic006G065600 Sobic003G191700 Sobic003G191700 Sobic006G133900--Sobic003G191700 Sobic006G090100 Sobic006G090100 Sobic005G179300--Sobic006G090100 Sobic001G077300 Sobic001G077300 Sobic005G179300--Sobic001G077300 Sobic003G073800 Sobic003G073800 Sobic005G179300--Sobic003G073800 Sobic005G179300--Sobic006G212800 Sobic009G207900 Sobic009G207900 Sobic005G179300--Sobic009G207900 Sobic001G207800 Sobic001G207800 Sobic005G179300--Sobic001G207800 Sobic009G219100 Sobic009G219100 Sobic005G179300--Sobic009G219100 Sobic004G271600 Sobic004G271600 Sobic005G179300--Sobic004G271600 Sobic002G081400 Sobic002G081400 Sobic005G179300--Sobic002G081400 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic001G169900--Sobic007G136200 Sobic001G169900--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic001G169900--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic001G169900--Sobic003G017100 Sobic006G212800--Sobic009G207900 Sobic006G212800--Sobic001G077300 Sobic001G180200 Sobic001G180200 Sobic006G212800--Sobic001G180200 Sobic007G135800 Sobic007G135800 Sobic006G212800--Sobic007G135800 Sobic002G206300 Sobic002G206300 Sobic006G212800--Sobic002G206300 Sobic009G073900 Sobic009G073900 Sobic006G212800--Sobic009G073900 Sobic002G132400 Sobic002G132400 Sobic006G212800--Sobic002G132400 Sobic006G212800--Sobic005G179300 Sobic002G162400 Sobic002G162400 Sobic006G212800--Sobic002G162400 Sobic009G038900 Sobic009G038900 Sobic004G042200--Sobic009G038900 Sobic004G042200--Sobic010G002700 Sobic004G042200--Sobic003G191700 Sobic006G050700 Sobic006G050700 Sobic004G042200--Sobic006G050700 Sobic003G220100 Sobic003G220100 Sobic004G042200--Sobic003G220100 Sobic004G042200--Sobic003G155100 Sobic010G243900 Sobic010G243900 Sobic004G042200--Sobic010G243900 Sobic005G106600 Sobic005G106600 Sobic004G042200--Sobic005G106600 Sobic004G042200--Sobic006G133900 Sobic001G512500 Sobic001G512500 Sobic003G343500--Sobic001G512500 Sobic003G343500--Sobic006G133900 Sobic001G065600 Sobic001G065600 Sobic003G343500--Sobic001G065600 Sobic003G343500--Sobic006G065600 Sobic003G343500--Sobic007G167100 Sobic003G343500--Sobic003G370700 Sobic002G193100 Sobic002G193100 Sobic003G343500--Sobic002G193100 Sobic010G176200 Sobic010G176200 Sobic003G343500--Sobic010G176200 Sobic010G058200 Sobic010G058200 Sobic003G343500--Sobic010G058200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.