Gene annotation
Transcriptome id Sobic.007G160700.1
Synonym Sb07g023390
Functional annotation MATE efflux family protein, putative, expressed
UniProt A0A1B6PI33
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF177
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT5G65380 : MATE efflux family protein
RAP-DB (Rice) LOC_Os08g37432.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a053728 , Zm00025a001018 , Zm00025a031207 , Zm00025a013140 , Zm00025a007368
Brachypodium PNT69457 , PNT74408 , KQK01431 , KQK01430 , KQK23215 , KQK14108 , PNT68299 , KQJ98686
Barley HORVU7Hr1G027270.11 , HORVU7Hr1G027270.10 , HORVU7Hr1G027270.13 , HORVU7Hr1G027270.12 , HORVU4Hr1G011690.4 , HORVU4Hr1G011690.7 , HORVU4Hr1G011690.1 , HORVU4Hr1G011690.3 , HORVU4Hr1G011690.2 , HORVU5Hr1G045360.7 , HORVU5Hr1G045360.6 , HORVU5Hr1G086830.3 , HORVU5Hr1G086830.4 , HORVU5Hr1G086830.6 , HORVU5Hr1G086830.7 , HORVU5Hr1G086830.8 , HORVU7Hr1G027270.1 , HORVU7Hr1G027270.3 , HORVU7Hr1G027270.2 , HORVU7Hr1G027270.5 , HORVU7Hr1G027270.4 , HORVU7Hr1G027270.7 , HORVU7Hr1G027270.6 , HORVU7Hr1G027270.9 , HORVU7Hr1G027270.8 , HORVU5Hr1G045360.16 , HORVU6Hr1G091850.1 , HORVU6Hr1G091850.2 , HORVU7Hr1G049240.5 , HORVU7Hr1G049240.6 , HORVU7Hr1G049240.2 , HORVU7Hr1G049240.3 , HORVU5Hr1G069900.3 , HORVU5Hr1G069900.6 , HORVU5Hr1G069900.5 , HORVU2Hr1G117540.2 , HORVU2Hr1G117540.3 , HORVU2Hr1G117540.1 , HORVU2Hr1G117540.6 , HORVU2Hr1G117540.7 , HORVU2Hr1G117540.4 , HORVU2Hr1G117540.5 , HORVU2Hr1G117540.8 , HORVU2Hr1G117540.9
Wheat TraesCS3A02G265100 , TraesCS7A02G272800 , TraesCS7B02G030600 , TraesCS6D02G384400 , TraesCS5D02G150100 , TraesCS5D02G254400 , TraesCS7D02G272900 , TraesCS6A02G400200 , TraesCS4D02G302500 , TraesCS4D02G068800 , TraesCS7D02G240600 , TraesCS7A02G241600 , TraesCS7A02G130300 , TraesCS7B02G137200 , TraesCS7D02G469000 , TraesCS7B02G384300 , TraesCS7D02G129700 , TraesCS5B02G245400 , TraesCS7A02G482100 , TraesCS5A02G349100 , TraesCS6B02G440400 , TraesCS4A02G404500 , TraesCS5A02G349000 , TraesCS5D02G355500 , TraesCS7B02G170800 , TraesCS4B02G304300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G476700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
2 Sobic.001G333800 MYB family transcription factor, putative, expressed -
3 Sobic.001G303200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
4 Sobic.007G090900 heat shock protein-related, putative, expressed -
5 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.007G167100 expressed protein K19373: DnaJ homolog subfamily C member 28
7 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
8 Sobic.009G103000 ubiquitin family protein, putative, expressed -
9 Sobic.001G207800 integral membrane protein, putative, expressed -
10 Sobic.001G243200 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
11 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
12 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
14 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
15 Sobic.002G129400 ABC transporter, ATP-binding protein, putative, expressed -
16 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
17 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
18 Sobic.001G077300 thioredoxin, putative, expressed -
19 Sobic.008G167600 VTC2, putative, expressed -
20 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -


Gene co-expression network
sample Sobic007G160700 Sobic007G160700 Sobic001G476700 Sobic001G476700 Sobic007G160700--Sobic001G476700 Sobic001G333800 Sobic001G333800 Sobic007G160700--Sobic001G333800 Sobic001G303200 Sobic001G303200 Sobic007G160700--Sobic001G303200 Sobic007G090900 Sobic007G090900 Sobic007G160700--Sobic007G090900 Sobic001G394800 Sobic001G394800 Sobic007G160700--Sobic001G394800 Sobic007G167100 Sobic007G167100 Sobic007G160700--Sobic007G167100 Sobic004G312600 Sobic004G312600 Sobic007G160700--Sobic004G312600 Sobic009G103000 Sobic009G103000 Sobic007G160700--Sobic009G103000 Sobic001G207800 Sobic001G207800 Sobic007G160700--Sobic001G207800 Sobic001G476700--Sobic007G160700 Sobic004G103000 Sobic004G103000 Sobic001G476700--Sobic004G103000 Sobic004G169000 Sobic004G169000 Sobic001G476700--Sobic004G169000 Sobic004G118200 Sobic004G118200 Sobic001G476700--Sobic004G118200 Sobic003G229300 Sobic003G229300 Sobic001G476700--Sobic003G229300 Sobic007G190000 Sobic007G190000 Sobic001G476700--Sobic007G190000 Sobic010G074300 Sobic010G074300 Sobic001G476700--Sobic010G074300 Sobic002G386100 Sobic002G386100 Sobic001G476700--Sobic002G386100 Sobic004G179300 Sobic004G179300 Sobic001G476700--Sobic004G179300 Sobic001G359300 Sobic001G359300 Sobic001G333800--Sobic001G359300 Sobic005G106600 Sobic005G106600 Sobic001G333800--Sobic005G106600 Sobic009G093100 Sobic009G093100 Sobic001G333800--Sobic009G093100 Sobic006G090100 Sobic006G090100 Sobic001G333800--Sobic006G090100 Sobic001G333800--Sobic001G303200 Sobic003G220100 Sobic003G220100 Sobic001G333800--Sobic003G220100 Sobic009G038900 Sobic009G038900 Sobic001G333800--Sobic009G038900 Sobic009G073900 Sobic009G073900 Sobic001G333800--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic001G333800--Sobic001G077300 Sobic001G283100 Sobic001G283100 Sobic001G303200--Sobic001G283100 Sobic002G382700 Sobic002G382700 Sobic001G303200--Sobic002G382700 Sobic001G303200--Sobic001G333800 Sobic001G303200--Sobic001G207800 Sobic006G102000 Sobic006G102000 Sobic001G303200--Sobic006G102000 Sobic007G108900 Sobic007G108900 Sobic001G303200--Sobic007G108900 Sobic006G221000 Sobic006G221000 Sobic001G303200--Sobic006G221000 Sobic001G303200--Sobic006G090100 Sobic003G094100 Sobic003G094100 Sobic001G303200--Sobic003G094100 Sobic006G212800 Sobic006G212800 Sobic007G090900--Sobic006G212800 Sobic003G157900 Sobic003G157900 Sobic007G090900--Sobic003G157900 Sobic007G090900--Sobic009G103000 Sobic007G090900--Sobic009G073900 Sobic007G090900--Sobic001G077300 Sobic001G263100 Sobic001G263100 Sobic007G090900--Sobic001G263100 Sobic002G162400 Sobic002G162400 Sobic007G090900--Sobic002G162400 Sobic009G207900 Sobic009G207900 Sobic007G090900--Sobic009G207900 Sobic003G073800 Sobic003G073800 Sobic007G090900--Sobic003G073800 Sobic002G138100 Sobic002G138100 Sobic001G394800--Sobic002G138100 Sobic001G169900 Sobic001G169900 Sobic001G394800--Sobic001G169900 Sobic003G003450 Sobic003G003450 Sobic001G394800--Sobic003G003450 Sobic003G057233 Sobic003G057233 Sobic001G394800--Sobic003G057233 Sobic007G010800 Sobic007G010800 Sobic001G394800--Sobic007G010800 Sobic001G394800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic001G394800--Sobic004G035900 Sobic001G054000 Sobic001G054000 Sobic001G394800--Sobic001G054000 Sobic007G227100 Sobic007G227100 Sobic001G394800--Sobic007G227100 Sobic006G065600 Sobic006G065600 Sobic007G167100--Sobic006G065600 Sobic004G181600 Sobic004G181600 Sobic007G167100--Sobic004G181600 Sobic010G002700 Sobic010G002700 Sobic007G167100--Sobic010G002700 Sobic006G133900 Sobic006G133900 Sobic007G167100--Sobic006G133900 Sobic005G179300 Sobic005G179300 Sobic007G167100--Sobic005G179300 Sobic007G167100--Sobic001G169900 Sobic007G167100--Sobic006G212800 Sobic004G042200 Sobic004G042200 Sobic007G167100--Sobic004G042200 Sobic003G343500 Sobic003G343500 Sobic007G167100--Sobic003G343500 Sobic004G312600--Sobic007G227100 Sobic004G127800 Sobic004G127800 Sobic004G312600--Sobic004G127800 Sobic008G038500 Sobic008G038500 Sobic004G312600--Sobic008G038500 Sobic001G331600 Sobic001G331600 Sobic004G312600--Sobic001G331600 Sobic004G312600--Sobic002G382700 Sobic002G293500 Sobic002G293500 Sobic004G312600--Sobic002G293500 Sobic004G312600--Sobic001G077300 Sobic004G312600--Sobic005G106600 Sobic004G312600--Sobic003G220100 Sobic007G087100 Sobic007G087100 Sobic009G103000--Sobic007G087100 Sobic009G103000--Sobic001G077300 Sobic009G170200 Sobic009G170200 Sobic009G103000--Sobic009G170200 Sobic009G103000--Sobic009G073900 Sobic009G103000--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic009G103000--Sobic006G232600 Sobic006G213700 Sobic006G213700 Sobic009G103000--Sobic006G213700 Sobic001G378100 Sobic001G378100 Sobic009G103000--Sobic001G378100 Sobic009G103000--Sobic006G212800 Sobic001G207800--Sobic006G090100 Sobic001G207800--Sobic001G283100 Sobic001G207800--Sobic002G382700 Sobic001G509200 Sobic001G509200 Sobic001G207800--Sobic001G509200 Sobic001G207800--Sobic001G077300 Sobic001G207800--Sobic007G108900 Sobic001G207800--Sobic009G073900 Sobic003G341300 Sobic003G341300 Sobic001G207800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic001G207800--Sobic007G157300
Octagon: transcription factors


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