Gene annotation
Transcriptome id Sobic.001G283100.2,Sobic.001G283100.1
Synonym Sb01g027850,PLGG
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
- (PubMedID : 26976818)
lrgB-like family protein, expressed
UniProt A0A1B6QLK6 , A0A1B6QLK9
Pfam PF04172
Panther DB PTHR30249 PTHR30249:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32080 : membrane protein, putative
RAP-DB (Rice) LOC_Os10g42780.1 : lrgB-like family protein, expressed
MaizeGDB (Corn) Zm00025a003558 , Zm00025a003556
Brachypodium KQJ97989
Barley HORVU1Hr1G051150.22 , HORVU1Hr1G051150.20 , HORVU1Hr1G051150.21 , HORVU1Hr1G051160.2 , HORVU1Hr1G051160.4 , HORVU1Hr1G051160.5 , HORVU1Hr1G051150.1 , HORVU1Hr1G051150.7 , HORVU1Hr1G051150.5 , HORVU1Hr1G051150.8 , HORVU1Hr1G051150.13 , HORVU1Hr1G051150.12 , HORVU1Hr1G051150.11 , HORVU1Hr1G051160.1 , HORVU1Hr1G051150.17 , HORVU1Hr1G051150.16 , HORVU1Hr1G051150.15 , HORVU1Hr1G051150.14 , HORVU1Hr1G051150.18 , HORVU1Hr1G051150.10
Wheat TraesCS1A02G196500 , TraesCS1D02G200000 , TraesCS1B02G211100
Populus -


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cDNA sequences
Sobic.001G283100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
2 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G207800 integral membrane protein, putative, expressed -
4 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.007G108900 APE1, putative, expressed -
6 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
7 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
8 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
9 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
10 Sobic.009G073900 thioredoxin, putative, expressed -
11 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
12 Sobic.006G221000 starch synthase 3(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@soluble starch synthase 3, chloroplast precursor, putative, expressed -
13 Sobic.001G303200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
14 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
15 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
16 Sobic.003G003450 - K01177: beta-amylase
17 Sobic.004G035900 expressed protein -
18 Sobic.001G504400 expressed protein -
19 Sobic.003G005000 expressed protein -
20 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G283100 Sobic001G283100 Sobic006G090100 Sobic006G090100 Sobic001G283100--Sobic006G090100 Sobic003G094100 Sobic003G094100 Sobic001G283100--Sobic003G094100 Sobic001G207800 Sobic001G207800 Sobic001G283100--Sobic001G207800 Sobic003G341300 Sobic003G341300 Sobic001G283100--Sobic003G341300 Sobic007G108900 Sobic007G108900 Sobic001G283100--Sobic007G108900 Sobic001G393300 Sobic001G393300 Sobic001G283100--Sobic001G393300 Sobic007G157300 Sobic007G157300 Sobic001G283100--Sobic007G157300 Sobic001G509200 Sobic001G509200 Sobic001G283100--Sobic001G509200 Sobic002G382700 Sobic002G382700 Sobic001G283100--Sobic002G382700 Sobic006G090100--Sobic001G207800 Sobic006G090100--Sobic001G283100 Sobic001G077300 Sobic001G077300 Sobic006G090100--Sobic001G077300 Sobic006G090100--Sobic001G509200 Sobic009G073900 Sobic009G073900 Sobic006G090100--Sobic009G073900 Sobic006G090100--Sobic002G382700 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic002G081400 Sobic002G081400 Sobic006G090100--Sobic002G081400 Sobic003G094100--Sobic007G108900 Sobic003G094100--Sobic001G509200 Sobic007G135800 Sobic007G135800 Sobic003G094100--Sobic007G135800 Sobic003G094100--Sobic001G393300 Sobic003G094100--Sobic001G283100 Sobic003G094100--Sobic007G157300 Sobic004G103300 Sobic004G103300 Sobic003G094100--Sobic004G103300 Sobic001G180200 Sobic001G180200 Sobic003G094100--Sobic001G180200 Sobic002G298800 Sobic002G298800 Sobic003G094100--Sobic002G298800 Sobic001G207800--Sobic006G090100 Sobic001G207800--Sobic001G283100 Sobic001G207800--Sobic002G382700 Sobic001G207800--Sobic001G509200 Sobic001G207800--Sobic001G077300 Sobic001G207800--Sobic007G108900 Sobic001G207800--Sobic009G073900 Sobic001G207800--Sobic003G341300 Sobic001G207800--Sobic007G157300 Sobic003G341300--Sobic001G180200 Sobic003G341300--Sobic007G157300 Sobic003G341300--Sobic001G283100 Sobic003G409700 Sobic003G409700 Sobic003G341300--Sobic003G409700 Sobic006G235400 Sobic006G235400 Sobic003G341300--Sobic006G235400 Sobic002G162400 Sobic002G162400 Sobic003G341300--Sobic002G162400 Sobic003G341300--Sobic001G077300 Sobic003G341300--Sobic006G090100 Sobic003G341300--Sobic003G094100 Sobic007G108900--Sobic003G094100 Sobic007G108900--Sobic001G509200 Sobic007G108900--Sobic004G103300 Sobic007G108900--Sobic001G393300 Sobic006G102000 Sobic006G102000 Sobic007G108900--Sobic006G102000 Sobic007G108900--Sobic001G283100 Sobic010G181300 Sobic010G181300 Sobic007G108900--Sobic010G181300 Sobic007G166300 Sobic007G166300 Sobic007G108900--Sobic007G166300 Sobic007G108900--Sobic002G298800 Sobic001G393300--Sobic002G298800 Sobic001G393300--Sobic007G166300 Sobic001G393300--Sobic001G509200 Sobic001G393300--Sobic004G103300 Sobic001G393300--Sobic003G094100 Sobic001G393300--Sobic007G108900 Sobic002G198300 Sobic002G198300 Sobic001G393300--Sobic002G198300 Sobic001G393300--Sobic007G135800 Sobic002G072500 Sobic002G072500 Sobic001G393300--Sobic002G072500 Sobic009G133700 Sobic009G133700 Sobic007G157300--Sobic009G133700 Sobic007G157300--Sobic003G341300 Sobic007G157300--Sobic003G094100 Sobic007G157300--Sobic001G283100 Sobic007G157300--Sobic007G108900 Sobic007G157300--Sobic007G135800 Sobic007G157300--Sobic001G393300 Sobic007G157300--Sobic001G509200 Sobic007G157300--Sobic003G409700 Sobic001G509200--Sobic007G135800 Sobic001G509200--Sobic004G103300 Sobic001G509200--Sobic001G393300 Sobic001G509200--Sobic007G108900 Sobic001G509200--Sobic007G166300 Sobic001G509200--Sobic003G094100 Sobic006G213700 Sobic006G213700 Sobic001G509200--Sobic006G213700 Sobic001G509200--Sobic006G090100 Sobic001G509200--Sobic009G073900 Sobic002G382700--Sobic001G207800 Sobic001G258200 Sobic001G258200 Sobic002G382700--Sobic001G258200 Sobic002G382700--Sobic006G090100 Sobic002G382700--Sobic003G341300 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic002G382700--Sobic001G077300 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100
Octagon: transcription factors


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