Gene annotation
Transcriptome id Sobic.004G035900.2
Synonym Sb04g003100
Functional annotation expressed protein
UniProt A0A194YMH7
Pfam -
Panther DB PTHR36006 PTHR36006:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G78995 : -
RAP-DB (Rice) LOC_Os02g04550.1 : expressed protein
MaizeGDB (Corn) Zm00025a018932
Brachypodium KQJ93241
Barley HORVU6Hr1G019350.2 , HORVU6Hr1G019350.3 , HORVU6Hr1G019350.1 , HORVU6Hr1G019350.4
Wheat TraesCS6B02G136700 , TraesCS6A02G108100 , TraesCS6D02G096100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G005000 expressed protein -
2 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
3 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G003450 - K01177: beta-amylase
5 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
6 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
7 Sobic.008G149100 B3 DNA binding domain containing protein, expressed -
8 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
9 Sobic.003G228300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
10 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
12 Sobic.009G133700 expressed protein -
13 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G409700 rieske domain containing protein, expressed -
15 Sobic.007G227100 expressed protein -
16 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
17 Sobic.006G221000 starch synthase 3(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@soluble starch synthase 3, chloroplast precursor, putative, expressed -
18 Sobic.006G213700 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed K13237: peroxisomal 2,4-dienoyl-CoA reductase
19 Sobic.007G108900 APE1, putative, expressed -
20 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -


Gene co-expression network
sample Sobic004G035900 Sobic004G035900 Sobic003G005000 Sobic003G005000 Sobic004G035900--Sobic003G005000 Sobic001G283100 Sobic001G283100 Sobic004G035900--Sobic001G283100 Sobic001G485100 Sobic001G485100 Sobic004G035900--Sobic001G485100 Sobic003G003450 Sobic003G003450 Sobic004G035900--Sobic003G003450 Sobic001G331600 Sobic001G331600 Sobic004G035900--Sobic001G331600 Sobic007G157300 Sobic007G157300 Sobic004G035900--Sobic007G157300 Sobic008G149100 Sobic008G149100 Sobic004G035900--Sobic008G149100 Sobic001G015200 Sobic001G015200 Sobic004G035900--Sobic001G015200 Sobic003G228300 Sobic003G228300 Sobic004G035900--Sobic003G228300 Sobic001G289500 Sobic001G289500 Sobic003G005000--Sobic001G289500 Sobic003G094100 Sobic003G094100 Sobic003G005000--Sobic003G094100 Sobic009G132000 Sobic009G132000 Sobic003G005000--Sobic009G132000 Sobic002G306800 Sobic002G306800 Sobic003G005000--Sobic002G306800 Sobic007G108900 Sobic007G108900 Sobic003G005000--Sobic007G108900 Sobic010G039500 Sobic010G039500 Sobic003G005000--Sobic010G039500 Sobic009G133700 Sobic009G133700 Sobic003G005000--Sobic009G133700 Sobic003G005000--Sobic007G157300 Sobic003G005000--Sobic004G035900 Sobic006G090100 Sobic006G090100 Sobic001G283100--Sobic006G090100 Sobic001G283100--Sobic003G094100 Sobic001G207800 Sobic001G207800 Sobic001G283100--Sobic001G207800 Sobic003G341300 Sobic003G341300 Sobic001G283100--Sobic003G341300 Sobic001G283100--Sobic007G108900 Sobic001G393300 Sobic001G393300 Sobic001G283100--Sobic001G393300 Sobic001G283100--Sobic007G157300 Sobic001G509200 Sobic001G509200 Sobic001G283100--Sobic001G509200 Sobic002G382700 Sobic002G382700 Sobic001G283100--Sobic002G382700 Sobic006G191500 Sobic006G191500 Sobic001G485100--Sobic006G191500 Sobic002G161400 Sobic002G161400 Sobic001G485100--Sobic002G161400 Sobic003G380200 Sobic003G380200 Sobic001G485100--Sobic003G380200 Sobic003G186800 Sobic003G186800 Sobic001G485100--Sobic003G186800 Sobic001G046000 Sobic001G046000 Sobic001G485100--Sobic001G046000 Sobic001G485100--Sobic001G331600 Sobic001G485100--Sobic003G228300 Sobic009G225600 Sobic009G225600 Sobic001G485100--Sobic009G225600 Sobic004G344600 Sobic004G344600 Sobic001G485100--Sobic004G344600 Sobic009G073900 Sobic009G073900 Sobic003G003450--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic003G003450--Sobic001G077300 Sobic003G003450--Sobic001G509200 Sobic006G213700 Sobic006G213700 Sobic003G003450--Sobic006G213700 Sobic002G081400 Sobic002G081400 Sobic003G003450--Sobic002G081400 Sobic006G232600 Sobic006G232600 Sobic003G003450--Sobic006G232600 Sobic003G003450--Sobic006G090100 Sobic007G087100 Sobic007G087100 Sobic003G003450--Sobic007G087100 Sobic003G003450--Sobic001G207800 Sobic001G331600--Sobic001G485100 Sobic004G128900 Sobic004G128900 Sobic001G331600--Sobic004G128900 Sobic004G153900 Sobic004G153900 Sobic001G331600--Sobic004G153900 Sobic001G331600--Sobic002G161400 Sobic001G331600--Sobic001G046000 Sobic004G312600 Sobic004G312600 Sobic001G331600--Sobic004G312600 Sobic007G227100 Sobic007G227100 Sobic001G331600--Sobic007G227100 Sobic001G331600--Sobic006G191500 Sobic001G331600--Sobic004G344600 Sobic007G157300--Sobic009G133700 Sobic007G157300--Sobic003G341300 Sobic007G157300--Sobic003G094100 Sobic007G157300--Sobic001G283100 Sobic007G157300--Sobic007G108900 Sobic007G135800 Sobic007G135800 Sobic007G157300--Sobic007G135800 Sobic007G157300--Sobic001G393300 Sobic007G157300--Sobic001G509200 Sobic003G409700 Sobic003G409700 Sobic007G157300--Sobic003G409700 Sobic002G047400 Sobic002G047400 Sobic008G149100--Sobic002G047400 Sobic008G149100--Sobic001G046000 Sobic001G499100 Sobic001G499100 Sobic008G149100--Sobic001G499100 Sobic008G149100--Sobic003G228300 Sobic008G149100--Sobic001G509200 Sobic008G149100--Sobic004G153900 Sobic010G104700 Sobic010G104700 Sobic008G149100--Sobic010G104700 Sobic008G149100--Sobic001G393300 Sobic010G101000 Sobic010G101000 Sobic008G149100--Sobic010G101000 Sobic008G088821 Sobic008G088821 Sobic001G015200--Sobic008G088821 Sobic007G166300 Sobic007G166300 Sobic001G015200--Sobic007G166300 Sobic003G103300 Sobic003G103300 Sobic001G015200--Sobic003G103300 Sobic006G140500 Sobic006G140500 Sobic001G015200--Sobic006G140500 Sobic001G015200--Sobic002G047400 Sobic001G015200--Sobic001G509200 Sobic001G015200--Sobic001G393300 Sobic009G119300 Sobic009G119300 Sobic001G015200--Sobic009G119300 Sobic001G015200--Sobic010G101000 Sobic003G228300--Sobic001G485100 Sobic003G228300--Sobic002G047400 Sobic003G228300--Sobic006G191500 Sobic003G228300--Sobic003G409700 Sobic003G228300--Sobic008G149100 Sobic003G228300--Sobic001G499100 Sobic003G228300--Sobic009G133700 Sobic003G228300--Sobic001G046000 Sobic003G228300--Sobic003G380200
Octagon: transcription factors


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