Gene annotation
Transcriptome id Sobic.009G133700.1
Synonym Sb09g019980
Functional annotation expressed protein
UniProt A0A1B6P889
Pfam -
Panther DB PTHR31218 PTHR31218:SF43
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G15545 : -
RAP-DB (Rice) LOC_Os05g33620.1 : expressed protein
MaizeGDB (Corn) Zm00025a037479 , Zm00025a043650
Brachypodium -
Barley -
Wheat TraesCS1B02G263900 , TraesCS1A02G254400 , TraesCS1D02G253800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
2 Sobic.003G409700 rieske domain containing protein, expressed -
3 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
6 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
7 Sobic.003G005000 expressed protein -
8 Sobic.003G228300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
9 Sobic.004G202200 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
10 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
11 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
12 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
13 Sobic.001G317800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.001G289500 kinase, pfkB family, putative, expressed -
15 Sobic.001G499100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
16 Sobic.008G149100 B3 DNA binding domain containing protein, expressed -
17 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
18 Sobic.007G166300 PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
19 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
20 Sobic.007G108900 APE1, putative, expressed -


Gene co-expression network
sample Sobic009G133700 Sobic009G133700 Sobic007G157300 Sobic007G157300 Sobic009G133700--Sobic007G157300 Sobic003G409700 Sobic003G409700 Sobic009G133700--Sobic003G409700 Sobic003G094100 Sobic003G094100 Sobic009G133700--Sobic003G094100 Sobic003G341300 Sobic003G341300 Sobic009G133700--Sobic003G341300 Sobic002G047400 Sobic002G047400 Sobic009G133700--Sobic002G047400 Sobic007G135800 Sobic007G135800 Sobic009G133700--Sobic007G135800 Sobic003G005000 Sobic003G005000 Sobic009G133700--Sobic003G005000 Sobic003G228300 Sobic003G228300 Sobic009G133700--Sobic003G228300 Sobic004G202200 Sobic004G202200 Sobic009G133700--Sobic004G202200 Sobic007G157300--Sobic009G133700 Sobic007G157300--Sobic003G341300 Sobic007G157300--Sobic003G094100 Sobic001G283100 Sobic001G283100 Sobic007G157300--Sobic001G283100 Sobic007G108900 Sobic007G108900 Sobic007G157300--Sobic007G108900 Sobic007G157300--Sobic007G135800 Sobic001G393300 Sobic001G393300 Sobic007G157300--Sobic001G393300 Sobic001G509200 Sobic001G509200 Sobic007G157300--Sobic001G509200 Sobic007G157300--Sobic003G409700 Sobic003G409700--Sobic003G341300 Sobic003G409700--Sobic009G133700 Sobic003G409700--Sobic007G135800 Sobic006G235400 Sobic006G235400 Sobic003G409700--Sobic006G235400 Sobic006G161500 Sobic006G161500 Sobic003G409700--Sobic006G161500 Sobic003G380200 Sobic003G380200 Sobic003G409700--Sobic003G380200 Sobic004G128900 Sobic004G128900 Sobic003G409700--Sobic004G128900 Sobic003G409700--Sobic007G157300 Sobic003G409700--Sobic003G228300 Sobic003G094100--Sobic007G108900 Sobic003G094100--Sobic001G509200 Sobic003G094100--Sobic007G135800 Sobic003G094100--Sobic001G393300 Sobic003G094100--Sobic001G283100 Sobic003G094100--Sobic007G157300 Sobic004G103300 Sobic004G103300 Sobic003G094100--Sobic004G103300 Sobic001G180200 Sobic001G180200 Sobic003G094100--Sobic001G180200 Sobic002G298800 Sobic002G298800 Sobic003G094100--Sobic002G298800 Sobic003G341300--Sobic001G180200 Sobic003G341300--Sobic007G157300 Sobic003G341300--Sobic001G283100 Sobic003G341300--Sobic003G409700 Sobic003G341300--Sobic006G235400 Sobic002G162400 Sobic002G162400 Sobic003G341300--Sobic002G162400 Sobic001G077300 Sobic001G077300 Sobic003G341300--Sobic001G077300 Sobic006G090100 Sobic006G090100 Sobic003G341300--Sobic006G090100 Sobic003G341300--Sobic003G094100 Sobic009G225600 Sobic009G225600 Sobic002G047400--Sobic009G225600 Sobic008G149100 Sobic008G149100 Sobic002G047400--Sobic008G149100 Sobic003G186800 Sobic003G186800 Sobic002G047400--Sobic003G186800 Sobic001G046000 Sobic001G046000 Sobic002G047400--Sobic001G046000 Sobic002G047400--Sobic003G228300 Sobic001G015200 Sobic001G015200 Sobic002G047400--Sobic001G015200 Sobic010G101000 Sobic010G101000 Sobic002G047400--Sobic010G101000 Sobic002G047400--Sobic001G509200 Sobic001G485100 Sobic001G485100 Sobic002G047400--Sobic001G485100 Sobic007G135800--Sobic001G509200 Sobic007G135800--Sobic003G094100 Sobic007G135800--Sobic001G393300 Sobic007G135800--Sobic001G180200 Sobic007G135800--Sobic004G103300 Sobic006G213700 Sobic006G213700 Sobic007G135800--Sobic006G213700 Sobic007G166300 Sobic007G166300 Sobic007G135800--Sobic007G166300 Sobic007G135800--Sobic003G409700 Sobic007G135800--Sobic003G341300 Sobic001G289500 Sobic001G289500 Sobic003G005000--Sobic001G289500 Sobic003G005000--Sobic003G094100 Sobic009G132000 Sobic009G132000 Sobic003G005000--Sobic009G132000 Sobic002G306800 Sobic002G306800 Sobic003G005000--Sobic002G306800 Sobic003G005000--Sobic007G108900 Sobic010G039500 Sobic010G039500 Sobic003G005000--Sobic010G039500 Sobic003G005000--Sobic009G133700 Sobic003G005000--Sobic007G157300 Sobic004G035900 Sobic004G035900 Sobic003G005000--Sobic004G035900 Sobic003G228300--Sobic001G485100 Sobic003G228300--Sobic002G047400 Sobic006G191500 Sobic006G191500 Sobic003G228300--Sobic006G191500 Sobic003G228300--Sobic003G409700 Sobic003G228300--Sobic008G149100 Sobic001G499100 Sobic001G499100 Sobic003G228300--Sobic001G499100 Sobic003G228300--Sobic009G133700 Sobic003G228300--Sobic001G046000 Sobic003G228300--Sobic003G380200 Sobic004G202200--Sobic001G289500 Sobic006G235350 Sobic006G235350 Sobic004G202200--Sobic006G235350 Sobic006G140500 Sobic006G140500 Sobic004G202200--Sobic006G140500 Sobic004G202200--Sobic009G133700 Sobic001G029600 Sobic001G029600 Sobic004G202200--Sobic001G029600 Sobic004G202200--Sobic003G094100 Sobic004G202200--Sobic003G005000 Sobic004G202200--Sobic001G015200 Sobic007G181400 Sobic007G181400 Sobic004G202200--Sobic007G181400
Octagon: transcription factors


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