Gene annotation
Transcriptome id Sobic.003G409700.2
Synonym
Functional annotation rieske domain containing protein, expressed
UniProt A0A1W0W174
Pfam PF13806
Panther DB PTHR21496 PTHR21496:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71500 : Rieske (2Fe-2S) domain-containing protein
RAP-DB (Rice) LOC_Os11g13850.1 : rieske domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026215
Brachypodium KQJ88804 , KQJ88803 , KQJ88801 , KQJ88802
Barley HORVU4Hr1G015330.2 , HORVU4Hr1G015330.1
Wheat TraesCS4A02G227300 , TraesCS4B02G089000 , TraesCS4D02G086900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.009G133700 expressed protein -
3 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
4 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
5 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
6 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
7 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
8 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.003G228300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
10 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
11 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G499100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
13 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
14 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G213700 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed K13237: peroxisomal 2,4-dienoyl-CoA reductase
16 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
17 Sobic.001G536700 expressed protein -
18 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
19 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -


Gene co-expression network
sample Sobic003G409700 Sobic003G409700 Sobic003G341300 Sobic003G341300 Sobic003G409700--Sobic003G341300 Sobic009G133700 Sobic009G133700 Sobic003G409700--Sobic009G133700 Sobic007G135800 Sobic007G135800 Sobic003G409700--Sobic007G135800 Sobic006G235400 Sobic006G235400 Sobic003G409700--Sobic006G235400 Sobic006G161500 Sobic006G161500 Sobic003G409700--Sobic006G161500 Sobic003G380200 Sobic003G380200 Sobic003G409700--Sobic003G380200 Sobic004G128900 Sobic004G128900 Sobic003G409700--Sobic004G128900 Sobic007G157300 Sobic007G157300 Sobic003G409700--Sobic007G157300 Sobic003G228300 Sobic003G228300 Sobic003G409700--Sobic003G228300 Sobic001G180200 Sobic001G180200 Sobic003G341300--Sobic001G180200 Sobic003G341300--Sobic007G157300 Sobic001G283100 Sobic001G283100 Sobic003G341300--Sobic001G283100 Sobic003G341300--Sobic003G409700 Sobic003G341300--Sobic006G235400 Sobic002G162400 Sobic002G162400 Sobic003G341300--Sobic002G162400 Sobic001G077300 Sobic001G077300 Sobic003G341300--Sobic001G077300 Sobic006G090100 Sobic006G090100 Sobic003G341300--Sobic006G090100 Sobic003G094100 Sobic003G094100 Sobic003G341300--Sobic003G094100 Sobic009G133700--Sobic007G157300 Sobic009G133700--Sobic003G409700 Sobic009G133700--Sobic003G094100 Sobic009G133700--Sobic003G341300 Sobic002G047400 Sobic002G047400 Sobic009G133700--Sobic002G047400 Sobic009G133700--Sobic007G135800 Sobic003G005000 Sobic003G005000 Sobic009G133700--Sobic003G005000 Sobic009G133700--Sobic003G228300 Sobic004G202200 Sobic004G202200 Sobic009G133700--Sobic004G202200 Sobic001G509200 Sobic001G509200 Sobic007G135800--Sobic001G509200 Sobic007G135800--Sobic003G094100 Sobic001G393300 Sobic001G393300 Sobic007G135800--Sobic001G393300 Sobic007G135800--Sobic001G180200 Sobic004G103300 Sobic004G103300 Sobic007G135800--Sobic004G103300 Sobic006G213700 Sobic006G213700 Sobic007G135800--Sobic006G213700 Sobic007G166300 Sobic007G166300 Sobic007G135800--Sobic007G166300 Sobic007G135800--Sobic003G409700 Sobic007G135800--Sobic003G341300 Sobic010G231300 Sobic010G231300 Sobic006G235400--Sobic010G231300 Sobic006G235400--Sobic001G077300 Sobic006G235400--Sobic004G128900 Sobic006G235400--Sobic003G341300 Sobic006G235400--Sobic003G409700 Sobic008G129900 Sobic008G129900 Sobic006G235400--Sobic008G129900 Sobic006G235400--Sobic006G161500 Sobic006G235400--Sobic003G380200 Sobic006G235400--Sobic001G180200 Sobic006G161500--Sobic004G128900 Sobic006G161500--Sobic010G231300 Sobic006G161500--Sobic003G409700 Sobic006G161500--Sobic006G235400 Sobic004G322600 Sobic004G322600 Sobic006G161500--Sobic004G322600 Sobic004G035100 Sobic004G035100 Sobic006G161500--Sobic004G035100 Sobic001G073300 Sobic001G073300 Sobic006G161500--Sobic001G073300 Sobic002G119100 Sobic002G119100 Sobic006G161500--Sobic002G119100 Sobic009G194500 Sobic009G194500 Sobic006G161500--Sobic009G194500 Sobic006G191500 Sobic006G191500 Sobic003G380200--Sobic006G191500 Sobic003G186800 Sobic003G186800 Sobic003G380200--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic003G380200--Sobic010G100900 Sobic003G304300 Sobic003G304300 Sobic003G380200--Sobic003G304300 Sobic004G267700 Sobic004G267700 Sobic003G380200--Sobic004G267700 Sobic001G485100 Sobic001G485100 Sobic003G380200--Sobic001G485100 Sobic007G087100 Sobic007G087100 Sobic003G380200--Sobic007G087100 Sobic002G161400 Sobic002G161400 Sobic003G380200--Sobic002G161400 Sobic004G268400 Sobic004G268400 Sobic003G380200--Sobic004G268400 Sobic004G128900--Sobic002G161400 Sobic004G153900 Sobic004G153900 Sobic004G128900--Sobic004G153900 Sobic004G128900--Sobic006G191500 Sobic004G128900--Sobic006G235400 Sobic004G128900--Sobic006G161500 Sobic004G344600 Sobic004G344600 Sobic004G128900--Sobic004G344600 Sobic004G128900--Sobic003G380200 Sobic001G331600 Sobic001G331600 Sobic004G128900--Sobic001G331600 Sobic004G128900--Sobic001G485100 Sobic007G157300--Sobic009G133700 Sobic007G157300--Sobic003G341300 Sobic007G157300--Sobic003G094100 Sobic007G157300--Sobic001G283100 Sobic007G108900 Sobic007G108900 Sobic007G157300--Sobic007G108900 Sobic007G157300--Sobic007G135800 Sobic007G157300--Sobic001G393300 Sobic007G157300--Sobic001G509200 Sobic007G157300--Sobic003G409700 Sobic003G228300--Sobic001G485100 Sobic003G228300--Sobic002G047400 Sobic003G228300--Sobic006G191500 Sobic003G228300--Sobic003G409700 Sobic008G149100 Sobic008G149100 Sobic003G228300--Sobic008G149100 Sobic001G499100 Sobic001G499100 Sobic003G228300--Sobic001G499100 Sobic003G228300--Sobic009G133700 Sobic001G046000 Sobic001G046000 Sobic003G228300--Sobic001G046000 Sobic003G228300--Sobic003G380200
Octagon: transcription factors


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