Gene annotation
Transcriptome id Sobic.002G306800.3,Sobic.002G306800.1,Sobic.002G306800.2
Synonym CTF2A, Sb02g033700
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
monooxygenase, putative, expressed
UniProt C5X956 , A0A1B6QEB2
Pfam PF01494
Panther DB PTHR13789 PTHR13789:SF224
NCBI CDD KOG2614; Kynurenine 3-monooxygenase and related flavoprotein monooxygenases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35660 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os07g30960.1 : monooxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a048095
Brachypodium KQK16159
Barley HORVU4Hr1G044040.9 , HORVU4Hr1G044040.6 , HORVU4Hr1G044040.7 , HORVU4Hr1G044040.4 , HORVU4Hr1G044040.5 , HORVU4Hr1G044040.2 , HORVU4Hr1G044040.3 , HORVU4Hr1G044040.1 , HORVU4Hr1G044040.14 , HORVU4Hr1G044040.15 , HORVU4Hr1G044040.10 , HORVU4Hr1G044040.11 , HORVU4Hr1G044040.12 , HORVU4Hr1G044040.13
Wheat TraesCS4D02G099100 , TraesCS4B02G102500 , TraesCS4A02G213300
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G005000 expressed protein -
2 Sobic.001G289500 kinase, pfkB family, putative, expressed -
3 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
5 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
6 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
8 Sobic.004G035900 expressed protein -
9 Sobic.004G202200 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
10 Sobic.009G133700 expressed protein -
11 Sobic.007G140700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00131: glyceraldehyde-3-phosphate dehydrogenase (NADP+)
12 Sobic.007G108900 APE1, putative, expressed -
13 Sobic.003G409700 rieske domain containing protein, expressed -
14 Sobic.001G207800 integral membrane protein, putative, expressed -
15 Sobic.006G235350 - -
16 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
18 Sobic.010G039500 genetic modifier, putative, expressed -
19 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
20 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G306800 Sobic002G306800 Sobic003G005000 Sobic003G005000 Sobic002G306800--Sobic003G005000 Sobic001G289500 Sobic001G289500 Sobic002G306800--Sobic001G289500 Sobic003G341300 Sobic003G341300 Sobic002G306800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic002G306800--Sobic007G157300 Sobic002G382700 Sobic002G382700 Sobic002G306800--Sobic002G382700 Sobic003G094100 Sobic003G094100 Sobic002G306800--Sobic003G094100 Sobic001G283100 Sobic001G283100 Sobic002G306800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic002G306800--Sobic004G035900 Sobic004G202200 Sobic004G202200 Sobic002G306800--Sobic004G202200 Sobic003G005000--Sobic001G289500 Sobic003G005000--Sobic003G094100 Sobic009G132000 Sobic009G132000 Sobic003G005000--Sobic009G132000 Sobic003G005000--Sobic002G306800 Sobic007G108900 Sobic007G108900 Sobic003G005000--Sobic007G108900 Sobic010G039500 Sobic010G039500 Sobic003G005000--Sobic010G039500 Sobic009G133700 Sobic009G133700 Sobic003G005000--Sobic009G133700 Sobic003G005000--Sobic007G157300 Sobic003G005000--Sobic004G035900 Sobic001G289500--Sobic003G005000 Sobic001G491000 Sobic001G491000 Sobic001G289500--Sobic001G491000 Sobic001G289500--Sobic004G202200 Sobic006G238200 Sobic006G238200 Sobic001G289500--Sobic006G238200 Sobic006G102000 Sobic006G102000 Sobic001G289500--Sobic006G102000 Sobic010G181300 Sobic010G181300 Sobic001G289500--Sobic010G181300 Sobic001G289500--Sobic007G108900 Sobic001G289500--Sobic003G094100 Sobic002G275300 Sobic002G275300 Sobic001G289500--Sobic002G275300 Sobic001G180200 Sobic001G180200 Sobic003G341300--Sobic001G180200 Sobic003G341300--Sobic007G157300 Sobic003G341300--Sobic001G283100 Sobic003G409700 Sobic003G409700 Sobic003G341300--Sobic003G409700 Sobic006G235400 Sobic006G235400 Sobic003G341300--Sobic006G235400 Sobic002G162400 Sobic002G162400 Sobic003G341300--Sobic002G162400 Sobic001G077300 Sobic001G077300 Sobic003G341300--Sobic001G077300 Sobic006G090100 Sobic006G090100 Sobic003G341300--Sobic006G090100 Sobic003G341300--Sobic003G094100 Sobic007G157300--Sobic009G133700 Sobic007G157300--Sobic003G341300 Sobic007G157300--Sobic003G094100 Sobic007G157300--Sobic001G283100 Sobic007G157300--Sobic007G108900 Sobic007G135800 Sobic007G135800 Sobic007G157300--Sobic007G135800 Sobic001G393300 Sobic001G393300 Sobic007G157300--Sobic001G393300 Sobic001G509200 Sobic001G509200 Sobic007G157300--Sobic001G509200 Sobic007G157300--Sobic003G409700 Sobic001G207800 Sobic001G207800 Sobic002G382700--Sobic001G207800 Sobic001G258200 Sobic001G258200 Sobic002G382700--Sobic001G258200 Sobic002G382700--Sobic006G090100 Sobic002G382700--Sobic003G341300 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic002G382700--Sobic001G077300 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100 Sobic003G094100--Sobic007G108900 Sobic003G094100--Sobic001G509200 Sobic003G094100--Sobic007G135800 Sobic003G094100--Sobic001G393300 Sobic003G094100--Sobic001G283100 Sobic003G094100--Sobic007G157300 Sobic004G103300 Sobic004G103300 Sobic003G094100--Sobic004G103300 Sobic003G094100--Sobic001G180200 Sobic002G298800 Sobic002G298800 Sobic003G094100--Sobic002G298800 Sobic001G283100--Sobic006G090100 Sobic001G283100--Sobic003G094100 Sobic001G283100--Sobic001G207800 Sobic001G283100--Sobic003G341300 Sobic001G283100--Sobic007G108900 Sobic001G283100--Sobic001G393300 Sobic001G283100--Sobic007G157300 Sobic001G283100--Sobic001G509200 Sobic001G283100--Sobic002G382700 Sobic004G035900--Sobic003G005000 Sobic004G035900--Sobic001G283100 Sobic001G485100 Sobic001G485100 Sobic004G035900--Sobic001G485100 Sobic003G003450 Sobic003G003450 Sobic004G035900--Sobic003G003450 Sobic001G331600 Sobic001G331600 Sobic004G035900--Sobic001G331600 Sobic004G035900--Sobic007G157300 Sobic008G149100 Sobic008G149100 Sobic004G035900--Sobic008G149100 Sobic001G015200 Sobic001G015200 Sobic004G035900--Sobic001G015200 Sobic003G228300 Sobic003G228300 Sobic004G035900--Sobic003G228300 Sobic004G202200--Sobic001G289500 Sobic006G235350 Sobic006G235350 Sobic004G202200--Sobic006G235350 Sobic006G140500 Sobic006G140500 Sobic004G202200--Sobic006G140500 Sobic004G202200--Sobic009G133700 Sobic001G029600 Sobic001G029600 Sobic004G202200--Sobic001G029600 Sobic004G202200--Sobic003G094100 Sobic004G202200--Sobic003G005000 Sobic004G202200--Sobic001G015200 Sobic007G181400 Sobic007G181400 Sobic004G202200--Sobic007G181400
Octagon: transcription factors


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