Gene annotation
Transcriptome id Sobic.004G181600.1,Sobic.004G181600.2
Synonym Sb04g023100
Functional annotation calmodulin binding protein, putative, expressed
UniProt C5XUY6
Pfam PF07887
Panther DB PTHR31713 PTHR31713:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0005516calmodulin binding


Orthologs (automatic annotation)
TAIR AT5G57580 : Calmodulin-binding protein
RAP-DB (Rice) LOC_Os02g35470.1 : calmodulin binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a019183 , Zm00025a031641 , Zm00025a020723 , Zm00025a034753 , Zm00025a011253
Brachypodium KQJ99924 , KQJ99923 , KQJ99922
Barley HORVU2Hr1G077560.20 , HORVU2Hr1G077560.21 , HORVU2Hr1G077560.22 , HORVU2Hr1G077560.23 , HORVU2Hr1G077560.24 , HORVU2Hr1G077560.25 , HORVU2Hr1G077560.26 , HORVU2Hr1G077560.27 , HORVU2Hr1G077560.28 , HORVU2Hr1G077560.29 , HORVU2Hr1G077560.15 , HORVU2Hr1G077560.14 , HORVU2Hr1G077560.17 , HORVU2Hr1G077560.16 , HORVU2Hr1G077560.11 , HORVU2Hr1G077560.10 , HORVU2Hr1G077560.13 , HORVU2Hr1G077560.12 , HORVU2Hr1G077560.19 , HORVU2Hr1G077560.18 , HORVU6Hr1G046540.13 , HORVU6Hr1G046540.12 , HORVU6Hr1G046540.11 , HORVU6Hr1G046540.10 , HORVU2Hr1G077560.1 , HORVU2Hr1G077560.3 , HORVU2Hr1G077560.2 , HORVU2Hr1G077560.5 , HORVU2Hr1G077560.4 , HORVU2Hr1G077560.7 , HORVU2Hr1G077560.6 , HORVU2Hr1G077560.9 , HORVU2Hr1G077560.8 , HORVU2Hr1G077560.33 , HORVU2Hr1G077560.32 , HORVU2Hr1G077560.31 , HORVU2Hr1G077560.30 , HORVU2Hr1G077560.35 , HORVU2Hr1G077560.34 , HORVU6Hr1G046540.9 , HORVU6Hr1G046540.8 , HORVU6Hr1G046540.7 , HORVU6Hr1G046540.6 , HORVU6Hr1G046540.5 , HORVU6Hr1G046540.4 , HORVU6Hr1G046540.3 , HORVU6Hr1G046540.2 , HORVU6Hr1G046540.1
Wheat TraesCS6B02G230900 , TraesCS2B02G328900 , TraesCS2B02G328900 , TraesCS2B02G328900 , TraesCS2B02G328900 , TraesCS6B02G230900 , TraesCS6B02G230900 , TraesCS6B02G230900 , TraesCS6B02G230900 , TraesCS6B02G230900 , TraesCS6B02G230900 , TraesCS6B02G230900 , TraesCS6B02G230900 , TraesCS6B02G230900 , TraesCS6D02G185500 , TraesCS6D02G185500 , TraesCS6D02G185500 , TraesCS6D02G185500 , TraesCS6D02G185500 , TraesCS6D02G185500 , TraesCS6D02G185500 , TraesCS6A02G199900 , TraesCS2A02G311900 , TraesCS2A02G311900 , TraesCS2A02G311900 , TraesCS2D02G310200 , TraesCS2D02G310200 , TraesCS2D02G310200 , TraesCS6A02G199900 , TraesCS6A02G199900 , TraesCS6A02G199900 , TraesCS6A02G199900 , TraesCS6A02G199900 , TraesCS6A02G199900 , TraesCS6A02G199900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G133900 NIN, putative, expressed -
2 Sobic.006G065600 expressed protein -
3 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
4 Sobic.005G075100 rp3 protein, putative, expressed -
5 Sobic.007G167100 expressed protein K19373: DnaJ homolog subfamily C member 28
6 Sobic.008G130100 protein kinase family protein, putative, expressed -
7 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
8 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
9 Sobic.004G178500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 7, putative, expressed K14486: K14486, auxin response factor
10 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -
11 Sobic.004G181700 calmodulin binding protein, putative, expressed -
12 Sobic.001G365900 PWWP domain containing protein, expressed -
13 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
14 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
15 Sobic.001G133000 expressed protein -
16 Sobic.002G124600 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
17 Sobic.006G065100 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
18 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
19 Sobic.002G345700 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
20 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL


Gene co-expression network
sample Sobic004G181600 Sobic004G181600 Sobic006G133900 Sobic006G133900 Sobic004G181600--Sobic006G133900 Sobic006G065600 Sobic006G065600 Sobic004G181600--Sobic006G065600 Sobic002G104100 Sobic002G104100 Sobic004G181600--Sobic002G104100 Sobic005G075100 Sobic005G075100 Sobic004G181600--Sobic005G075100 Sobic007G167100 Sobic007G167100 Sobic004G181600--Sobic007G167100 Sobic008G130100 Sobic008G130100 Sobic004G181600--Sobic008G130100 Sobic006G219600 Sobic006G219600 Sobic004G181600--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic004G181600--Sobic003G155100 Sobic004G178500 Sobic004G178500 Sobic004G181600--Sobic004G178500 Sobic006G133900--Sobic004G181600 Sobic001G454500 Sobic001G454500 Sobic006G133900--Sobic001G454500 Sobic006G133900--Sobic003G155100 Sobic006G133900--Sobic006G219600 Sobic003G370700 Sobic003G370700 Sobic006G133900--Sobic003G370700 Sobic006G133900--Sobic002G104100 Sobic006G133900--Sobic008G130100 Sobic006G133900--Sobic006G065600 Sobic003G191700 Sobic003G191700 Sobic006G133900--Sobic003G191700 Sobic006G065600--Sobic004G181600 Sobic006G065600--Sobic007G167100 Sobic006G065600--Sobic006G133900 Sobic006G065600--Sobic002G104100 Sobic006G065600--Sobic008G130100 Sobic006G065600--Sobic001G454500 Sobic007G193700 Sobic007G193700 Sobic006G065600--Sobic007G193700 Sobic006G065600--Sobic004G178500 Sobic001G365900 Sobic001G365900 Sobic006G065600--Sobic001G365900 Sobic002G104100--Sobic004G181600 Sobic002G104100--Sobic006G133900 Sobic002G104100--Sobic006G065600 Sobic004G164400 Sobic004G164400 Sobic002G104100--Sobic004G164400 Sobic002G104100--Sobic003G370700 Sobic001G169900 Sobic001G169900 Sobic002G104100--Sobic001G169900 Sobic010G248700 Sobic010G248700 Sobic002G104100--Sobic010G248700 Sobic002G104100--Sobic001G365900 Sobic006G182900 Sobic006G182900 Sobic002G104100--Sobic006G182900 Sobic002G115050 Sobic002G115050 Sobic005G075100--Sobic002G115050 Sobic005G075100--Sobic004G181600 Sobic002G173100 Sobic002G173100 Sobic005G075100--Sobic002G173100 Sobic002G345700 Sobic002G345700 Sobic005G075100--Sobic002G345700 Sobic003G190000 Sobic003G190000 Sobic005G075100--Sobic003G190000 Sobic010G141966 Sobic010G141966 Sobic005G075100--Sobic010G141966 Sobic005G075100--Sobic006G133900 Sobic005G075100--Sobic006G219600 Sobic009G097200 Sobic009G097200 Sobic005G075100--Sobic009G097200 Sobic007G167100--Sobic006G065600 Sobic007G167100--Sobic004G181600 Sobic010G002700 Sobic010G002700 Sobic007G167100--Sobic010G002700 Sobic007G167100--Sobic006G133900 Sobic005G179300 Sobic005G179300 Sobic007G167100--Sobic005G179300 Sobic007G167100--Sobic001G169900 Sobic006G212800 Sobic006G212800 Sobic007G167100--Sobic006G212800 Sobic004G042200 Sobic004G042200 Sobic007G167100--Sobic004G042200 Sobic003G343500 Sobic003G343500 Sobic007G167100--Sobic003G343500 Sobic008G130100--Sobic001G365900 Sobic008G130100--Sobic001G454500 Sobic008G130100--Sobic006G133900 Sobic010G010700 Sobic010G010700 Sobic008G130100--Sobic010G010700 Sobic008G130100--Sobic003G155100 Sobic004G034900 Sobic004G034900 Sobic008G130100--Sobic004G034900 Sobic002G346200 Sobic002G346200 Sobic008G130100--Sobic002G346200 Sobic010G206900 Sobic010G206900 Sobic008G130100--Sobic010G206900 Sobic007G198300 Sobic007G198300 Sobic008G130100--Sobic007G198300 Sobic006G219600--Sobic003G155100 Sobic009G201300 Sobic009G201300 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G050700 Sobic006G050700 Sobic006G219600--Sobic006G050700 Sobic001G298900 Sobic001G298900 Sobic006G219600--Sobic001G298900 Sobic006G219600--Sobic006G133900 Sobic001G133000 Sobic001G133000 Sobic006G219600--Sobic001G133000 Sobic005G106600 Sobic005G106600 Sobic006G219600--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic006G219600--Sobic005G084500 Sobic008G001200 Sobic008G001200 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic004G178500--Sobic001G298900 Sobic002G198200 Sobic002G198200 Sobic004G178500--Sobic002G198200 Sobic004G178500--Sobic004G181600 Sobic008G044100 Sobic008G044100 Sobic004G178500--Sobic008G044100 Sobic004G178500--Sobic006G133900 Sobic004G178500--Sobic006G065600 Sobic006G270700 Sobic006G270700 Sobic004G178500--Sobic006G270700 Sobic004G178500--Sobic001G365900 Sobic003G388100 Sobic003G388100 Sobic004G178500--Sobic003G388100
Octagon: transcription factors


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