Gene annotation
Transcriptome id Sobic.002G104100.1
Synonym Sb02g008830
Functional annotation FYVE zinc finger domain containing protein, expressed
UniProt C5X3I0
Pfam PF01363 PF04366
Panther DB PTHR15629 PTHR15629:SF2
NCBI CDD KOG1843; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G43230 : RING/FYVE/PHD-type zinc finger family protein
RAP-DB (Rice) LOC_Os07g17130.1 : FYVE zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045563
Brachypodium KQK20177 , KQK20179 , KQK20178 , KQK20180 , KQK20181
Barley HORVU3Hr1G016350.6 , HORVU3Hr1G016350.7 , HORVU3Hr1G016350.4 , HORVU3Hr1G016350.5 , HORVU3Hr1G016350.2 , HORVU3Hr1G016350.3 , HORVU3Hr1G016350.1 , HORVU3Hr1G016350.8
Wheat TraesCS3B02G106600 , TraesCS3D02G091300 , TraesCS3A02G091400
Populus -


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cDNA sequences
Sobic.002G104100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G181600 calmodulin binding protein, putative, expressed -
2 Sobic.006G133900 NIN, putative, expressed -
3 Sobic.006G065600 expressed protein -
4 Sobic.004G164400 expressed protein -
5 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -
6 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
7 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
8 Sobic.001G365900 PWWP domain containing protein, expressed -
9 Sobic.006G182900 expressed protein -
10 Sobic.008G130100 protein kinase family protein, putative, expressed -
11 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
13 Sobic.006G105400 expressed protein -
14 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
15 Sobic.002G252800 OsFBX332 - F-box domain containing protein, expressed -
16 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
17 Sobic.001G318432 - -
18 Sobic.001G214300 expressed protein -
19 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
20 Sobic.001G100100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@GATA transcription factor 25, putative, expressed -


Gene co-expression network
sample Sobic002G104100 Sobic002G104100 Sobic004G181600 Sobic004G181600 Sobic002G104100--Sobic004G181600 Sobic006G133900 Sobic006G133900 Sobic002G104100--Sobic006G133900 Sobic006G065600 Sobic006G065600 Sobic002G104100--Sobic006G065600 Sobic004G164400 Sobic004G164400 Sobic002G104100--Sobic004G164400 Sobic003G370700 Sobic003G370700 Sobic002G104100--Sobic003G370700 Sobic001G169900 Sobic001G169900 Sobic002G104100--Sobic001G169900 Sobic010G248700 Sobic010G248700 Sobic002G104100--Sobic010G248700 Sobic001G365900 Sobic001G365900 Sobic002G104100--Sobic001G365900 Sobic006G182900 Sobic006G182900 Sobic002G104100--Sobic006G182900 Sobic004G181600--Sobic006G133900 Sobic004G181600--Sobic006G065600 Sobic004G181600--Sobic002G104100 Sobic005G075100 Sobic005G075100 Sobic004G181600--Sobic005G075100 Sobic007G167100 Sobic007G167100 Sobic004G181600--Sobic007G167100 Sobic008G130100 Sobic008G130100 Sobic004G181600--Sobic008G130100 Sobic006G219600 Sobic006G219600 Sobic004G181600--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic004G181600--Sobic003G155100 Sobic004G178500 Sobic004G178500 Sobic004G181600--Sobic004G178500 Sobic006G133900--Sobic004G181600 Sobic001G454500 Sobic001G454500 Sobic006G133900--Sobic001G454500 Sobic006G133900--Sobic003G155100 Sobic006G133900--Sobic006G219600 Sobic006G133900--Sobic003G370700 Sobic006G133900--Sobic002G104100 Sobic006G133900--Sobic008G130100 Sobic006G133900--Sobic006G065600 Sobic003G191700 Sobic003G191700 Sobic006G133900--Sobic003G191700 Sobic006G065600--Sobic004G181600 Sobic006G065600--Sobic007G167100 Sobic006G065600--Sobic006G133900 Sobic006G065600--Sobic002G104100 Sobic006G065600--Sobic008G130100 Sobic006G065600--Sobic001G454500 Sobic007G193700 Sobic007G193700 Sobic006G065600--Sobic007G193700 Sobic006G065600--Sobic004G178500 Sobic006G065600--Sobic001G365900 Sobic006G228500 Sobic006G228500 Sobic004G164400--Sobic006G228500 Sobic007G108500 Sobic007G108500 Sobic004G164400--Sobic007G108500 Sobic004G174400 Sobic004G174400 Sobic004G164400--Sobic004G174400 Sobic002G006600 Sobic002G006600 Sobic004G164400--Sobic002G006600 Sobic004G164400--Sobic002G104100 Sobic006G105400 Sobic006G105400 Sobic004G164400--Sobic006G105400 Sobic001G318432 Sobic001G318432 Sobic004G164400--Sobic001G318432 Sobic006G274600 Sobic006G274600 Sobic004G164400--Sobic006G274600 Sobic001G126100 Sobic001G126100 Sobic004G164400--Sobic001G126100 Sobic003G370700--Sobic006G133900 Sobic001G333800 Sobic001G333800 Sobic003G370700--Sobic001G333800 Sobic003G370700--Sobic002G104100 Sobic003G370700--Sobic004G181600 Sobic003G229300 Sobic003G229300 Sobic003G370700--Sobic003G229300 Sobic003G370700--Sobic003G191700 Sobic009G038900 Sobic009G038900 Sobic003G370700--Sobic009G038900 Sobic005G106600 Sobic005G106600 Sobic003G370700--Sobic005G106600 Sobic007G198300 Sobic007G198300 Sobic003G370700--Sobic007G198300 Sobic010G002700 Sobic010G002700 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic001G169900--Sobic010G043800 Sobic007G136200 Sobic007G136200 Sobic001G169900--Sobic007G136200 Sobic001G198100 Sobic001G198100 Sobic001G169900--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic001G169900--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic003G017100 Sobic003G017100 Sobic001G169900--Sobic003G017100 Sobic001G214300 Sobic001G214300 Sobic010G248700--Sobic001G214300 Sobic010G248700--Sobic008G130100 Sobic002G173000 Sobic002G173000 Sobic010G248700--Sobic002G173000 Sobic010G256700 Sobic010G256700 Sobic010G248700--Sobic010G256700 Sobic004G341900 Sobic004G341900 Sobic010G248700--Sobic004G341900 Sobic010G248700--Sobic001G365900 Sobic010G248700--Sobic002G104100 Sobic003G148000 Sobic003G148000 Sobic010G248700--Sobic003G148000 Sobic010G248700--Sobic001G454500 Sobic010G206900 Sobic010G206900 Sobic001G365900--Sobic010G206900 Sobic001G534700 Sobic001G534700 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic001G365900--Sobic008G130100 Sobic002G411600 Sobic002G411600 Sobic001G365900--Sobic002G411600 Sobic002G008900 Sobic002G008900 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic004G034900 Sobic004G034900 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic003G429650 Sobic003G429650 Sobic006G182900--Sobic003G429650 Sobic006G048500 Sobic006G048500 Sobic006G182900--Sobic006G048500 Sobic007G161000 Sobic007G161000 Sobic006G182900--Sobic007G161000 Sobic006G182900--Sobic001G365900 Sobic007G116200 Sobic007G116200 Sobic006G182900--Sobic007G116200 Sobic004G096600 Sobic004G096600 Sobic006G182900--Sobic004G096600 Sobic002G134200 Sobic002G134200 Sobic006G182900--Sobic002G134200 Sobic006G182900--Sobic001G214300 Sobic009G209300 Sobic009G209300 Sobic006G182900--Sobic009G209300
Octagon: transcription factors


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