Gene annotation
Transcriptome id Sobic.008G130100.1
Synonym Sb08g018240
Functional annotation protein kinase family protein, putative, expressed
UniProt C5YPT3
Pfam PF00989 PF07714
Panther DB PTHR23257 PTHR23257:SF485
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G49470 : PAS domain-containing protein tyrosine kinase family protein
RAP-DB (Rice) LOC_Os12g37570.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a025464 , Zm00025a004153
Brachypodium KQJ86280
Barley HORVU5Hr1G022360.14 , HORVU5Hr1G022360.15 , HORVU5Hr1G022360.16 , HORVU5Hr1G022360.17 , HORVU5Hr1G022360.10 , HORVU5Hr1G022360.11 , HORVU5Hr1G022360.12 , HORVU5Hr1G022360.13 , HORVU5Hr1G022360.18 , HORVU5Hr1G022360.19 , HORVU5Hr1G022360.21 , HORVU5Hr1G022360.20 , HORVU5Hr1G022360.22 , HORVU4Hr1G029350.9 , HORVU4Hr1G029350.8 , HORVU4Hr1G029350.2 , HORVU4Hr1G029350.1 , HORVU4Hr1G029350.6 , HORVU4Hr1G029350.5 , HORVU4Hr1G029350.4 , HORVU4Hr1G029350.19 , HORVU4Hr1G029350.18 , HORVU4Hr1G029350.13 , HORVU4Hr1G029350.12 , HORVU4Hr1G029350.11 , HORVU4Hr1G029350.10 , HORVU4Hr1G029350.16 , HORVU4Hr1G029350.15 , HORVU4Hr1G029350.14 , HORVU4Hr1G029350.30 , HORVU4Hr1G029350.23 , HORVU4Hr1G029350.20 , HORVU4Hr1G029350.21 , HORVU4Hr1G029350.26 , HORVU4Hr1G029350.27 , HORVU4Hr1G029350.24 , HORVU4Hr1G029350.25 , HORVU4Hr1G029350.28 , HORVU4Hr1G029350.29 , HORVU5Hr1G022360.8 , HORVU5Hr1G022360.9 , HORVU5Hr1G022360.6 , HORVU5Hr1G022360.7 , HORVU5Hr1G022360.4 , HORVU5Hr1G022360.5 , HORVU5Hr1G022360.2 , HORVU5Hr1G022360.3 , HORVU5Hr1G022360.1
Wheat TraesCS5D02G097900 , TraesCS5D02G405800 , TraesCS5B02G091700 , TraesCS5B02G401200 , TraesCS5B02G401200 , TraesCS5A02G085900 , TraesCS5A02G085900
Populus PNT49934


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G365900 PWWP domain containing protein, expressed -
2 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
3 Sobic.006G133900 NIN, putative, expressed -
4 Sobic.010G010700 PHD-finger family protein, expressed -
5 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
6 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
7 Sobic.002G346200 expressed protein -
8 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
9 Sobic.007G198300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
10 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
11 Sobic.003G388100 expressed protein -
12 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
13 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
14 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
15 Sobic.001G289600 BAH domain containing protein, putative, expressed -
16 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
17 Sobic.006G065600 expressed protein -
18 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
19 Sobic.004G181600 calmodulin binding protein, putative, expressed -
20 Sobic.009G191000 MATH domain containing protein, expressed -


Gene co-expression network
sample Sobic008G130100 Sobic008G130100 Sobic001G365900 Sobic001G365900 Sobic008G130100--Sobic001G365900 Sobic001G454500 Sobic001G454500 Sobic008G130100--Sobic001G454500 Sobic006G133900 Sobic006G133900 Sobic008G130100--Sobic006G133900 Sobic010G010700 Sobic010G010700 Sobic008G130100--Sobic010G010700 Sobic003G155100 Sobic003G155100 Sobic008G130100--Sobic003G155100 Sobic004G034900 Sobic004G034900 Sobic008G130100--Sobic004G034900 Sobic002G346200 Sobic002G346200 Sobic008G130100--Sobic002G346200 Sobic010G206900 Sobic010G206900 Sobic008G130100--Sobic010G206900 Sobic007G198300 Sobic007G198300 Sobic008G130100--Sobic007G198300 Sobic001G365900--Sobic010G206900 Sobic001G534700 Sobic001G534700 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic001G365900--Sobic008G130100 Sobic002G411600 Sobic002G411600 Sobic001G365900--Sobic002G411600 Sobic002G008900 Sobic002G008900 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic003G388100 Sobic003G388100 Sobic001G454500--Sobic003G388100 Sobic001G454500--Sobic008G130100 Sobic001G454500--Sobic006G133900 Sobic001G375100 Sobic001G375100 Sobic001G454500--Sobic001G375100 Sobic001G454500--Sobic001G365900 Sobic008G001200 Sobic008G001200 Sobic001G454500--Sobic008G001200 Sobic001G454500--Sobic010G010700 Sobic001G454500--Sobic003G155100 Sobic003G247500 Sobic003G247500 Sobic001G454500--Sobic003G247500 Sobic004G181600 Sobic004G181600 Sobic006G133900--Sobic004G181600 Sobic006G133900--Sobic001G454500 Sobic006G133900--Sobic003G155100 Sobic006G219600 Sobic006G219600 Sobic006G133900--Sobic006G219600 Sobic003G370700 Sobic003G370700 Sobic006G133900--Sobic003G370700 Sobic002G104100 Sobic002G104100 Sobic006G133900--Sobic002G104100 Sobic006G133900--Sobic008G130100 Sobic006G065600 Sobic006G065600 Sobic006G133900--Sobic006G065600 Sobic003G191700 Sobic003G191700 Sobic006G133900--Sobic003G191700 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic004G276400 Sobic004G276400 Sobic010G010700--Sobic004G276400 Sobic001G194200 Sobic001G194200 Sobic010G010700--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic010G010700--Sobic007G062800 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic003G155100--Sobic001G230000 Sobic003G155100--Sobic001G375100 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic004G034900--Sobic002G411600 Sobic004G034900--Sobic001G540400 Sobic003G422500 Sobic003G422500 Sobic004G034900--Sobic003G422500 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800 Sobic002G346200--Sobic003G155100 Sobic002G346200--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic002G346200--Sobic003G196300 Sobic006G050700 Sobic006G050700 Sobic002G346200--Sobic006G050700 Sobic002G346200--Sobic001G365900 Sobic002G346200--Sobic001G534700 Sobic002G346200--Sobic010G206900 Sobic002G346200--Sobic001G194200 Sobic002G346200--Sobic006G219600 Sobic010G206900--Sobic010G010700 Sobic010G206900--Sobic001G365900 Sobic010G206900--Sobic004G034900 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic007G198300--Sobic001G375100 Sobic007G198300--Sobic003G155100 Sobic007G198300--Sobic008G130100 Sobic007G198300--Sobic003G191700 Sobic009G038900 Sobic009G038900 Sobic007G198300--Sobic009G038900 Sobic003G229300 Sobic003G229300 Sobic007G198300--Sobic003G229300 Sobic007G198300--Sobic006G219600 Sobic007G198300--Sobic006G133900 Sobic001G381600 Sobic001G381600 Sobic007G198300--Sobic001G381600
Octagon: transcription factors


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