Gene annotation
Transcriptome id Sobic.006G065600.2,Sobic.006G065600.6,Sobic.006G065600.5,Sobic.006G065600.4,Sobic.006G065600.3
Synonym Sb06g015260
Functional annotation expressed protein
UniProt C5YFR4
Pfam PF07082
Panther DB PTHR34127 PTHR34127:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47860 : Protein of unknown function (DUF1350)
RAP-DB (Rice) LOC_Os04g33280.2,LOC_Os04g33280.1 : expressed protein
MaizeGDB (Corn) Zm00025a011563
Brachypodium KQJ82437 , KQJ82438
Barley -
Wheat TraesCS2D02G289500 , TraesCS2D02G289500 , TraesCS2D02G289500 , TraesCS2A02G291500 , TraesCS2B02G308000 , TraesCS2B02G308000 , TraesCS2B02G308000
Populus -


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cDNA sequences
Sobic.006G065600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G181600 calmodulin binding protein, putative, expressed -
2 Sobic.007G167100 expressed protein K19373: DnaJ homolog subfamily C member 28
3 Sobic.006G133900 NIN, putative, expressed -
4 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
5 Sobic.008G130100 protein kinase family protein, putative, expressed -
6 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
7 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
8 Sobic.004G178500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 7, putative, expressed K14486: K14486, auxin response factor
9 Sobic.001G365900 PWWP domain containing protein, expressed -
10 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
11 Sobic.002G193100 expressed protein -
12 Sobic.006G182900 expressed protein -
13 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
14 Sobic.007G106800 nucleolar protein NOP5, putative, expressed -
15 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
16 Sobic.010G002700 expressed protein -
17 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
18 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
19 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
20 Sobic.002G064750 - -


Gene co-expression network
sample Sobic006G065600 Sobic006G065600 Sobic004G181600 Sobic004G181600 Sobic006G065600--Sobic004G181600 Sobic007G167100 Sobic007G167100 Sobic006G065600--Sobic007G167100 Sobic006G133900 Sobic006G133900 Sobic006G065600--Sobic006G133900 Sobic002G104100 Sobic002G104100 Sobic006G065600--Sobic002G104100 Sobic008G130100 Sobic008G130100 Sobic006G065600--Sobic008G130100 Sobic001G454500 Sobic001G454500 Sobic006G065600--Sobic001G454500 Sobic007G193700 Sobic007G193700 Sobic006G065600--Sobic007G193700 Sobic004G178500 Sobic004G178500 Sobic006G065600--Sobic004G178500 Sobic001G365900 Sobic001G365900 Sobic006G065600--Sobic001G365900 Sobic004G181600--Sobic006G133900 Sobic004G181600--Sobic006G065600 Sobic004G181600--Sobic002G104100 Sobic005G075100 Sobic005G075100 Sobic004G181600--Sobic005G075100 Sobic004G181600--Sobic007G167100 Sobic004G181600--Sobic008G130100 Sobic006G219600 Sobic006G219600 Sobic004G181600--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic004G181600--Sobic003G155100 Sobic004G181600--Sobic004G178500 Sobic007G167100--Sobic006G065600 Sobic007G167100--Sobic004G181600 Sobic010G002700 Sobic010G002700 Sobic007G167100--Sobic010G002700 Sobic007G167100--Sobic006G133900 Sobic005G179300 Sobic005G179300 Sobic007G167100--Sobic005G179300 Sobic001G169900 Sobic001G169900 Sobic007G167100--Sobic001G169900 Sobic006G212800 Sobic006G212800 Sobic007G167100--Sobic006G212800 Sobic004G042200 Sobic004G042200 Sobic007G167100--Sobic004G042200 Sobic003G343500 Sobic003G343500 Sobic007G167100--Sobic003G343500 Sobic006G133900--Sobic004G181600 Sobic006G133900--Sobic001G454500 Sobic006G133900--Sobic003G155100 Sobic006G133900--Sobic006G219600 Sobic003G370700 Sobic003G370700 Sobic006G133900--Sobic003G370700 Sobic006G133900--Sobic002G104100 Sobic006G133900--Sobic008G130100 Sobic006G133900--Sobic006G065600 Sobic003G191700 Sobic003G191700 Sobic006G133900--Sobic003G191700 Sobic002G104100--Sobic004G181600 Sobic002G104100--Sobic006G133900 Sobic002G104100--Sobic006G065600 Sobic004G164400 Sobic004G164400 Sobic002G104100--Sobic004G164400 Sobic002G104100--Sobic003G370700 Sobic002G104100--Sobic001G169900 Sobic010G248700 Sobic010G248700 Sobic002G104100--Sobic010G248700 Sobic002G104100--Sobic001G365900 Sobic006G182900 Sobic006G182900 Sobic002G104100--Sobic006G182900 Sobic008G130100--Sobic001G365900 Sobic008G130100--Sobic001G454500 Sobic008G130100--Sobic006G133900 Sobic010G010700 Sobic010G010700 Sobic008G130100--Sobic010G010700 Sobic008G130100--Sobic003G155100 Sobic004G034900 Sobic004G034900 Sobic008G130100--Sobic004G034900 Sobic002G346200 Sobic002G346200 Sobic008G130100--Sobic002G346200 Sobic010G206900 Sobic010G206900 Sobic008G130100--Sobic010G206900 Sobic007G198300 Sobic007G198300 Sobic008G130100--Sobic007G198300 Sobic003G388100 Sobic003G388100 Sobic001G454500--Sobic003G388100 Sobic001G454500--Sobic008G130100 Sobic001G454500--Sobic006G133900 Sobic001G375100 Sobic001G375100 Sobic001G454500--Sobic001G375100 Sobic001G454500--Sobic001G365900 Sobic008G001200 Sobic008G001200 Sobic001G454500--Sobic008G001200 Sobic001G454500--Sobic010G010700 Sobic001G454500--Sobic003G155100 Sobic003G247500 Sobic003G247500 Sobic001G454500--Sobic003G247500 Sobic004G263600 Sobic004G263600 Sobic007G193700--Sobic004G263600 Sobic003G086900 Sobic003G086900 Sobic007G193700--Sobic003G086900 Sobic004G200200 Sobic004G200200 Sobic007G193700--Sobic004G200200 Sobic004G174200 Sobic004G174200 Sobic007G193700--Sobic004G174200 Sobic002G134200 Sobic002G134200 Sobic007G193700--Sobic002G134200 Sobic010G239600 Sobic010G239600 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic007G193700--Sobic003G247500 Sobic003G396200 Sobic003G396200 Sobic007G193700--Sobic003G396200 Sobic001G298900 Sobic001G298900 Sobic004G178500--Sobic001G298900 Sobic002G198200 Sobic002G198200 Sobic004G178500--Sobic002G198200 Sobic004G178500--Sobic004G181600 Sobic008G044100 Sobic008G044100 Sobic004G178500--Sobic008G044100 Sobic004G178500--Sobic006G133900 Sobic004G178500--Sobic006G065600 Sobic006G270700 Sobic006G270700 Sobic004G178500--Sobic006G270700 Sobic004G178500--Sobic001G365900 Sobic004G178500--Sobic003G388100 Sobic001G365900--Sobic010G206900 Sobic001G534700 Sobic001G534700 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic001G365900--Sobic008G130100 Sobic002G411600 Sobic002G411600 Sobic001G365900--Sobic002G411600 Sobic002G008900 Sobic002G008900 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400
Octagon: transcription factors


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