Gene annotation
Transcriptome id Sobic.002G193100.1,Sobic.002G193100.2
Synonym Sb02g024000
Functional annotation expressed protein
UniProt C5XC28 , A0A1W0W4X0
Pfam -
Panther DB PTHR31354 PTHR31354:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70160 : -
RAP-DB (Rice) LOC_Os09g22440.1 : expressed protein
MaizeGDB (Corn) Zm00025a046862
Brachypodium KQJ98314 , PNT68116 , PNT68117 , PNT68118 , PNT68119 , KQJ90124 , KQJ98316 , KQJ98315
Barley HORVU5Hr1G060070.4 , HORVU5Hr1G060070.5 , HORVU5Hr1G060070.6 , HORVU5Hr1G060070.7 , HORVU5Hr1G060070.1 , HORVU5Hr1G060070.2 , HORVU5Hr1G060070.3 , HORVU5Hr1G060070.8 , HORVU5Hr1G060070.9
Wheat TraesCS5B02G200700 , TraesCS1D02G219400 , TraesCS1D02G219400 , TraesCS1D02G219400 , TraesCS5A02G202100 , TraesCS5D02G208400
Populus PNT14546 , PNT14544 , PNT14545 , PNT14542 , PNT14543


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cDNA sequences
Sobic.002G193100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G026500 expressed protein -
2 Sobic.010G196500 zinc-binding protein, putative, expressed -
3 Sobic.007G227700 expressed protein -
4 Sobic.007G169300 expressed protein -
5 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
6 Sobic.006G065600 expressed protein -
7 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
8 Sobic.001G219700 pentatricopeptide, putative, expressed -
9 Sobic.002G345700 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
10 Sobic.004G181600 calmodulin binding protein, putative, expressed -
11 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
12 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
13 Sobic.001G381200 vacuolar-sorting receptor precursor, putative, expressed -
14 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
15 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
16 Sobic.006G133900 NIN, putative, expressed -
17 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
18 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
19 Sobic.008G130100 protein kinase family protein, putative, expressed -
20 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3


Gene co-expression network
sample Sobic002G193100 Sobic002G193100 Sobic004G026500 Sobic004G026500 Sobic002G193100--Sobic004G026500 Sobic010G196500 Sobic010G196500 Sobic002G193100--Sobic010G196500 Sobic007G227700 Sobic007G227700 Sobic002G193100--Sobic007G227700 Sobic007G169300 Sobic007G169300 Sobic002G193100--Sobic007G169300 Sobic002G276100 Sobic002G276100 Sobic002G193100--Sobic002G276100 Sobic006G065600 Sobic006G065600 Sobic002G193100--Sobic006G065600 Sobic003G343500 Sobic003G343500 Sobic002G193100--Sobic003G343500 Sobic001G219700 Sobic001G219700 Sobic002G193100--Sobic001G219700 Sobic002G345700 Sobic002G345700 Sobic002G193100--Sobic002G345700 Sobic008G172300 Sobic008G172300 Sobic004G026500--Sobic008G172300 Sobic001G124100 Sobic001G124100 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic002G339300 Sobic002G339300 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic004G026500--Sobic007G227700 Sobic004G026500--Sobic002G276100 Sobic001G488700 Sobic001G488700 Sobic010G196500--Sobic001G488700 Sobic001G500800 Sobic001G500800 Sobic010G196500--Sobic001G500800 Sobic003G086900 Sobic003G086900 Sobic010G196500--Sobic003G086900 Sobic010G196500--Sobic002G193100 Sobic007G084300 Sobic007G084300 Sobic010G196500--Sobic007G084300 Sobic002G386100 Sobic002G386100 Sobic010G196500--Sobic002G386100 Sobic008G146900 Sobic008G146900 Sobic010G196500--Sobic008G146900 Sobic001G381200 Sobic001G381200 Sobic010G196500--Sobic001G381200 Sobic002G187700 Sobic002G187700 Sobic010G196500--Sobic002G187700 Sobic007G227700--Sobic007G169300 Sobic007G227700--Sobic001G072700 Sobic007G227700--Sobic004G026500 Sobic007G227700--Sobic002G193100 Sobic010G140600 Sobic010G140600 Sobic007G227700--Sobic010G140600 Sobic001G029200 Sobic001G029200 Sobic007G227700--Sobic001G029200 Sobic002G001000 Sobic002G001000 Sobic007G227700--Sobic002G001000 Sobic008G081900 Sobic008G081900 Sobic007G227700--Sobic008G081900 Sobic002G349100 Sobic002G349100 Sobic007G227700--Sobic002G349100 Sobic007G169300--Sobic007G227700 Sobic007G169300--Sobic008G081900 Sobic006G030400 Sobic006G030400 Sobic007G169300--Sobic006G030400 Sobic007G169300--Sobic002G193100 Sobic002G129400 Sobic002G129400 Sobic007G169300--Sobic002G129400 Sobic009G011600 Sobic009G011600 Sobic007G169300--Sobic009G011600 Sobic007G169300--Sobic002G349100 Sobic007G169300--Sobic004G026500 Sobic010G058200 Sobic010G058200 Sobic007G169300--Sobic010G058200 Sobic003G381200 Sobic003G381200 Sobic002G276100--Sobic003G381200 Sobic002G276100--Sobic004G026500 Sobic004G181700 Sobic004G181700 Sobic002G276100--Sobic004G181700 Sobic001G159400 Sobic001G159400 Sobic002G276100--Sobic001G159400 Sobic010G138000 Sobic010G138000 Sobic002G276100--Sobic010G138000 Sobic002G168500 Sobic002G168500 Sobic002G276100--Sobic002G168500 Sobic002G276100--Sobic009G193500 Sobic002G276100--Sobic008G172300 Sobic001G268200 Sobic001G268200 Sobic002G276100--Sobic001G268200 Sobic004G181600 Sobic004G181600 Sobic006G065600--Sobic004G181600 Sobic007G167100 Sobic007G167100 Sobic006G065600--Sobic007G167100 Sobic006G133900 Sobic006G133900 Sobic006G065600--Sobic006G133900 Sobic002G104100 Sobic002G104100 Sobic006G065600--Sobic002G104100 Sobic008G130100 Sobic008G130100 Sobic006G065600--Sobic008G130100 Sobic001G454500 Sobic001G454500 Sobic006G065600--Sobic001G454500 Sobic007G193700 Sobic007G193700 Sobic006G065600--Sobic007G193700 Sobic004G178500 Sobic004G178500 Sobic006G065600--Sobic004G178500 Sobic001G365900 Sobic001G365900 Sobic006G065600--Sobic001G365900 Sobic001G512500 Sobic001G512500 Sobic003G343500--Sobic001G512500 Sobic003G343500--Sobic006G133900 Sobic001G065600 Sobic001G065600 Sobic003G343500--Sobic001G065600 Sobic003G343500--Sobic006G065600 Sobic003G343500--Sobic007G167100 Sobic003G370700 Sobic003G370700 Sobic003G343500--Sobic003G370700 Sobic003G343500--Sobic002G193100 Sobic010G176200 Sobic010G176200 Sobic003G343500--Sobic010G176200 Sobic003G343500--Sobic010G058200 Sobic006G233700 Sobic006G233700 Sobic001G219700--Sobic006G233700 Sobic001G219700--Sobic004G026500 Sobic001G219700--Sobic001G124100 Sobic001G219700--Sobic003G203300 Sobic001G219700--Sobic008G081900 Sobic001G219700--Sobic002G129400 Sobic005G084500 Sobic005G084500 Sobic001G219700--Sobic005G084500 Sobic009G241200 Sobic009G241200 Sobic001G219700--Sobic009G241200 Sobic001G219700--Sobic002G349100 Sobic002G345700--Sobic008G172300 Sobic005G075100 Sobic005G075100 Sobic002G345700--Sobic005G075100 Sobic005G142800 Sobic005G142800 Sobic002G345700--Sobic005G142800 Sobic001G396000 Sobic001G396000 Sobic002G345700--Sobic001G396000 Sobic002G198200 Sobic002G198200 Sobic002G345700--Sobic002G198200 Sobic002G345700--Sobic004G026500 Sobic002G345700--Sobic001G124100 Sobic002G345700--Sobic004G181600 Sobic007G111400 Sobic007G111400 Sobic002G345700--Sobic007G111400
Octagon: transcription factors


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