Gene annotation
Transcriptome id Sobic.007G227700.1
Synonym Sb07g029230
Functional annotation expressed protein
UniProt C5YJS1
Pfam -
Panther DB PTHR33735 PTHR33735:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G14095 : -
RAP-DB (Rice) LOC_Os08g37720.1 : expressed protein
MaizeGDB (Corn) Zm00025a004928
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G227700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G169300 expressed protein -
2 Sobic.001G072700 expressed protein -
3 Sobic.004G026500 expressed protein -
4 Sobic.002G193100 expressed protein -
5 Sobic.010G140600 bolA, putative, expressed -
6 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
7 Sobic.002G001000 transmembrane amino acid transporter protein, putative, expressed -
8 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
9 Sobic.002G349100 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
10 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
11 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
12 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
13 Sobic.006G030400 xa21, putative, expressed -
14 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
15 Sobic.001G512500 expressed protein -
16 Sobic.001G243200 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
17 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
18 Sobic.008G144800 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
19 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
20 Sobic.002G136100 genetic modifier, putative, expressed -


Gene co-expression network
sample Sobic007G227700 Sobic007G227700 Sobic007G169300 Sobic007G169300 Sobic007G227700--Sobic007G169300 Sobic001G072700 Sobic001G072700 Sobic007G227700--Sobic001G072700 Sobic004G026500 Sobic004G026500 Sobic007G227700--Sobic004G026500 Sobic002G193100 Sobic002G193100 Sobic007G227700--Sobic002G193100 Sobic010G140600 Sobic010G140600 Sobic007G227700--Sobic010G140600 Sobic001G029200 Sobic001G029200 Sobic007G227700--Sobic001G029200 Sobic002G001000 Sobic002G001000 Sobic007G227700--Sobic002G001000 Sobic008G081900 Sobic008G081900 Sobic007G227700--Sobic008G081900 Sobic002G349100 Sobic002G349100 Sobic007G227700--Sobic002G349100 Sobic007G169300--Sobic007G227700 Sobic007G169300--Sobic008G081900 Sobic006G030400 Sobic006G030400 Sobic007G169300--Sobic006G030400 Sobic007G169300--Sobic002G193100 Sobic002G129400 Sobic002G129400 Sobic007G169300--Sobic002G129400 Sobic009G011600 Sobic009G011600 Sobic007G169300--Sobic009G011600 Sobic007G169300--Sobic002G349100 Sobic007G169300--Sobic004G026500 Sobic010G058200 Sobic010G058200 Sobic007G169300--Sobic010G058200 Sobic001G072700--Sobic007G227700 Sobic001G072700--Sobic004G026500 Sobic001G072700--Sobic010G140600 Sobic008G172300 Sobic008G172300 Sobic001G072700--Sobic008G172300 Sobic003G037300 Sobic003G037300 Sobic001G072700--Sobic003G037300 Sobic009G014100 Sobic009G014100 Sobic001G072700--Sobic009G014100 Sobic006G173600 Sobic006G173600 Sobic001G072700--Sobic006G173600 Sobic003G014300 Sobic003G014300 Sobic001G072700--Sobic003G014300 Sobic004G298900 Sobic004G298900 Sobic001G072700--Sobic004G298900 Sobic004G026500--Sobic008G172300 Sobic001G124100 Sobic001G124100 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic004G026500--Sobic001G072700 Sobic002G339300 Sobic002G339300 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic002G193100--Sobic004G026500 Sobic010G196500 Sobic010G196500 Sobic002G193100--Sobic010G196500 Sobic002G193100--Sobic007G227700 Sobic002G193100--Sobic007G169300 Sobic002G193100--Sobic002G276100 Sobic006G065600 Sobic006G065600 Sobic002G193100--Sobic006G065600 Sobic003G343500 Sobic003G343500 Sobic002G193100--Sobic003G343500 Sobic002G193100--Sobic001G219700 Sobic002G345700 Sobic002G345700 Sobic002G193100--Sobic002G345700 Sobic010G269400 Sobic010G269400 Sobic010G140600--Sobic010G269400 Sobic010G140600--Sobic010G058200 Sobic001G286600 Sobic001G286600 Sobic010G140600--Sobic001G286600 Sobic004G281900 Sobic004G281900 Sobic010G140600--Sobic004G281900 Sobic004G238200 Sobic004G238200 Sobic010G140600--Sobic004G238200 Sobic002G102200 Sobic002G102200 Sobic010G140600--Sobic002G102200 Sobic010G140600--Sobic001G072700 Sobic006G155500 Sobic006G155500 Sobic010G140600--Sobic006G155500 Sobic008G144800 Sobic008G144800 Sobic010G140600--Sobic008G144800 Sobic010G035500 Sobic010G035500 Sobic001G029200--Sobic010G035500 Sobic004G300000 Sobic004G300000 Sobic001G029200--Sobic004G300000 Sobic009G019100 Sobic009G019100 Sobic001G029200--Sobic009G019100 Sobic001G029200--Sobic008G081900 Sobic009G213800 Sobic009G213800 Sobic001G029200--Sobic009G213800 Sobic001G029200--Sobic007G227700 Sobic001G029200--Sobic002G193100 Sobic001G029200--Sobic004G026500 Sobic001G029200--Sobic002G339300 Sobic002G001000--Sobic007G227700 Sobic002G200700 Sobic002G200700 Sobic002G001000--Sobic002G200700 Sobic004G207400 Sobic004G207400 Sobic002G001000--Sobic004G207400 Sobic002G001000--Sobic010G140600 Sobic002G001000--Sobic001G072700 Sobic010G013200 Sobic010G013200 Sobic002G001000--Sobic010G013200 Sobic008G089900 Sobic008G089900 Sobic002G001000--Sobic008G089900 Sobic003G403500 Sobic003G403500 Sobic002G001000--Sobic003G403500 Sobic003G224100 Sobic003G224100 Sobic002G001000--Sobic003G224100 Sobic008G081900--Sobic002G129400 Sobic008G081900--Sobic001G219700 Sobic004G307100 Sobic004G307100 Sobic008G081900--Sobic004G307100 Sobic008G081900--Sobic010G035500 Sobic007G166200 Sobic007G166200 Sobic008G081900--Sobic007G166200 Sobic008G081900--Sobic007G169300 Sobic008G081900--Sobic004G300000 Sobic008G081900--Sobic004G026500 Sobic008G081900--Sobic006G030400 Sobic002G072400 Sobic002G072400 Sobic002G349100--Sobic002G072400 Sobic002G349100--Sobic002G129400 Sobic004G317700 Sobic004G317700 Sobic002G349100--Sobic004G317700 Sobic002G349100--Sobic008G081900 Sobic002G349100--Sobic004G207400 Sobic002G349100--Sobic001G219700 Sobic002G349100--Sobic004G238200 Sobic009G162600 Sobic009G162600 Sobic002G349100--Sobic009G162600 Sobic004G300100 Sobic004G300100 Sobic002G349100--Sobic004G300100
Octagon: transcription factors


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