Gene annotation
Transcriptome id Sobic.002G349100.1
Synonym Sb02g037160
Functional annotation pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed
UniProt C5XCC3
Pfam PF01243 PF10615
Panther DB PTHR13343 PTHR13343:SF4
NCBI CDD KOG3374; Cellular repressor of transcription
KEGG Orthology -
Gene Ontology GO:0010181; FMN binding GO:0004733pyridoxamine-phosphate oxidase activity


Orthologs (automatic annotation)
TAIR AT3G03890 : FMN binding
RAP-DB (Rice) LOC_Os07g38620.1 : pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048472
Brachypodium KQK15594 , KQK15593
Barley HORVU2Hr1G037680.1 , HORVU2Hr1G037680.2
Wheat TraesCS2B02G222400 , TraesCS2D02G202700 , TraesCS2A02G184900 , TraesCS2B02G222400
Populus -


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cDNA sequences
Sobic.002G349100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
2 Sobic.002G129400 ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.004G317700 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
4 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
5 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
6 Sobic.001G219700 pentatricopeptide, putative, expressed -
7 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
8 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
9 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
10 Sobic.007G166200 PPDK(PubMedID : 19549309)@NADP-malete dehydrogenase(PubMedID : 26904072)@NADP-malate dehydrogenase (NADP-MDH)(PubMedID : 16243851)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
11 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
12 Sobic.004G307100 M16 domain containing zinc peptidase, putative, expressed K06972: PITRM1, PreP, presequence protease
13 Sobic.004G026500 expressed protein -
14 Sobic.002G081400 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
15 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
16 Sobic.007G227700 expressed protein -
17 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
18 Sobic.007G169300 expressed protein -
19 Sobic.003G203300 stress regulated protein, putative, expressed -
20 Sobic.010G140600 bolA, putative, expressed -


Gene co-expression network
sample Sobic002G349100 Sobic002G349100 Sobic002G072400 Sobic002G072400 Sobic002G349100--Sobic002G072400 Sobic002G129400 Sobic002G129400 Sobic002G349100--Sobic002G129400 Sobic004G317700 Sobic004G317700 Sobic002G349100--Sobic004G317700 Sobic008G081900 Sobic008G081900 Sobic002G349100--Sobic008G081900 Sobic004G207400 Sobic004G207400 Sobic002G349100--Sobic004G207400 Sobic001G219700 Sobic001G219700 Sobic002G349100--Sobic001G219700 Sobic004G238200 Sobic004G238200 Sobic002G349100--Sobic004G238200 Sobic009G162600 Sobic009G162600 Sobic002G349100--Sobic009G162600 Sobic004G300100 Sobic004G300100 Sobic002G349100--Sobic004G300100 Sobic002G072400--Sobic004G207400 Sobic002G072400--Sobic002G349100 Sobic002G072400--Sobic004G317700 Sobic002G072400--Sobic004G238200 Sobic002G072400--Sobic002G129400 Sobic004G307100 Sobic004G307100 Sobic002G072400--Sobic004G307100 Sobic004G281900 Sobic004G281900 Sobic002G072400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic002G072400--Sobic007G166200 Sobic002G081400 Sobic002G081400 Sobic002G072400--Sobic002G081400 Sobic002G129400--Sobic007G166200 Sobic002G129400--Sobic008G081900 Sobic002G129400--Sobic002G072400 Sobic002G129400--Sobic002G349100 Sobic002G129400--Sobic002G081400 Sobic009G093100 Sobic009G093100 Sobic002G129400--Sobic009G093100 Sobic003G203300 Sobic003G203300 Sobic002G129400--Sobic003G203300 Sobic006G065100 Sobic006G065100 Sobic002G129400--Sobic006G065100 Sobic002G129400--Sobic001G219700 Sobic004G317700--Sobic002G081400 Sobic002G356900 Sobic002G356900 Sobic004G317700--Sobic002G356900 Sobic004G317700--Sobic004G300100 Sobic007G087100 Sobic007G087100 Sobic004G317700--Sobic007G087100 Sobic009G073900 Sobic009G073900 Sobic004G317700--Sobic009G073900 Sobic003G003450 Sobic003G003450 Sobic004G317700--Sobic003G003450 Sobic002G060800 Sobic002G060800 Sobic004G317700--Sobic002G060800 Sobic004G317700--Sobic002G072400 Sobic007G124500 Sobic007G124500 Sobic004G317700--Sobic007G124500 Sobic008G081900--Sobic002G129400 Sobic008G081900--Sobic001G219700 Sobic008G081900--Sobic004G307100 Sobic010G035500 Sobic010G035500 Sobic008G081900--Sobic010G035500 Sobic008G081900--Sobic007G166200 Sobic007G169300 Sobic007G169300 Sobic008G081900--Sobic007G169300 Sobic004G300000 Sobic004G300000 Sobic008G081900--Sobic004G300000 Sobic004G026500 Sobic004G026500 Sobic008G081900--Sobic004G026500 Sobic006G030400 Sobic006G030400 Sobic008G081900--Sobic006G030400 Sobic004G207400--Sobic002G072400 Sobic006G232600 Sobic006G232600 Sobic004G207400--Sobic006G232600 Sobic004G207400--Sobic004G238200 Sobic009G170200 Sobic009G170200 Sobic004G207400--Sobic009G170200 Sobic004G207400--Sobic003G203300 Sobic002G225100 Sobic002G225100 Sobic004G207400--Sobic002G225100 Sobic004G207400--Sobic004G300100 Sobic004G207400--Sobic004G281900 Sobic004G207400--Sobic007G166200 Sobic006G233700 Sobic006G233700 Sobic001G219700--Sobic006G233700 Sobic001G219700--Sobic004G026500 Sobic001G124100 Sobic001G124100 Sobic001G219700--Sobic001G124100 Sobic001G219700--Sobic003G203300 Sobic001G219700--Sobic008G081900 Sobic001G219700--Sobic002G129400 Sobic005G084500 Sobic005G084500 Sobic001G219700--Sobic005G084500 Sobic009G241200 Sobic009G241200 Sobic001G219700--Sobic009G241200 Sobic001G219700--Sobic002G349100 Sobic003G232700 Sobic003G232700 Sobic004G238200--Sobic003G232700 Sobic004G238200--Sobic004G207400 Sobic001G500600 Sobic001G500600 Sobic004G238200--Sobic001G500600 Sobic004G238200--Sobic005G084500 Sobic001G516901 Sobic001G516901 Sobic004G238200--Sobic001G516901 Sobic004G238200--Sobic002G072400 Sobic007G005400 Sobic007G005400 Sobic004G238200--Sobic007G005400 Sobic006G197300 Sobic006G197300 Sobic004G238200--Sobic006G197300 Sobic004G238200--Sobic006G232600 Sobic003G340600 Sobic003G340600 Sobic009G162600--Sobic003G340600 Sobic009G162600--Sobic002G349100 Sobic009G103000 Sobic009G103000 Sobic009G162600--Sobic009G103000 Sobic009G162600--Sobic002G072400 Sobic002G275100 Sobic002G275100 Sobic009G162600--Sobic002G275100 Sobic003G105900 Sobic003G105900 Sobic009G162600--Sobic003G105900 Sobic008G089900 Sobic008G089900 Sobic009G162600--Sobic008G089900 Sobic009G162600--Sobic004G300100 Sobic003G029500 Sobic003G029500 Sobic009G162600--Sobic003G029500 Sobic010G231500 Sobic010G231500 Sobic004G300100--Sobic010G231500 Sobic004G300100--Sobic002G356900 Sobic004G300100--Sobic004G317700 Sobic004G300100--Sobic002G081400 Sobic004G271600 Sobic004G271600 Sobic004G300100--Sobic004G271600 Sobic004G300100--Sobic009G170200 Sobic002G132400 Sobic002G132400 Sobic004G300100--Sobic002G132400 Sobic004G165900 Sobic004G165900 Sobic004G300100--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic004G300100--Sobic004G252500
Octagon: transcription factors


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