Gene annotation
Transcriptome id Sobic.004G026500.3,Sobic.004G026500.4,Sobic.004G026500.1,Sobic.004G026500.2
Synonym Sb04g002350
Functional annotation expressed protein
UniProt A0A194YMB5 , A0A194YMF2 , A0A194YMC7
Pfam -
Panther DB PTHR33065 PTHR33065:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g07160.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6B02G311300 , TraesCS3A02G465000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
2 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
3 Sobic.009G193500 AGAP007115-PA, putative, expressed -
4 Sobic.001G219700 pentatricopeptide, putative, expressed -
5 Sobic.001G072700 expressed protein -
6 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
7 Sobic.003G203300 stress regulated protein, putative, expressed -
8 Sobic.007G227700 expressed protein -
9 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
10 Sobic.009G014100 OsFBX178 - F-box domain containing protein, expressed -
11 Sobic.006G030400 xa21, putative, expressed -
12 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
13 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
14 Sobic.001G512500 expressed protein -
15 Sobic.002G193100 expressed protein -
16 Sobic.002G168500 NBS-LRR type disease resistance protein, putative, expressed -
17 Sobic.003G306600 acetamidase, putative, expressed K01455: formamidase
18 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
19 Sobic.002G168300 RGH2B, putative, expressed -
20 Sobic.003G110800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8


Gene co-expression network
sample Sobic004G026500 Sobic004G026500 Sobic008G172300 Sobic008G172300 Sobic004G026500--Sobic008G172300 Sobic001G124100 Sobic001G124100 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic002G339300 Sobic002G339300 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic008G172300--Sobic004G026500 Sobic009G014100 Sobic009G014100 Sobic008G172300--Sobic009G014100 Sobic003G340600 Sobic003G340600 Sobic008G172300--Sobic003G340600 Sobic002G345700 Sobic002G345700 Sobic008G172300--Sobic002G345700 Sobic008G172300--Sobic001G124100 Sobic010G197000 Sobic010G197000 Sobic008G172300--Sobic010G197000 Sobic005G142800 Sobic005G142800 Sobic008G172300--Sobic005G142800 Sobic002G168300 Sobic002G168300 Sobic008G172300--Sobic002G168300 Sobic002G167500 Sobic002G167500 Sobic008G172300--Sobic002G167500 Sobic001G124100--Sobic004G026500 Sobic001G124100--Sobic001G219700 Sobic001G124100--Sobic005G142800 Sobic001G124100--Sobic008G172300 Sobic001G396000 Sobic001G396000 Sobic001G124100--Sobic001G396000 Sobic001G124100--Sobic002G339300 Sobic002G168500 Sobic002G168500 Sobic001G124100--Sobic002G168500 Sobic006G233700 Sobic006G233700 Sobic001G124100--Sobic006G233700 Sobic006G219600 Sobic006G219600 Sobic001G124100--Sobic006G219600 Sobic009G193500--Sobic004G026500 Sobic009G193500--Sobic002G339300 Sobic009G193500--Sobic002G276100 Sobic009G193500--Sobic001G124100 Sobic007G103100 Sobic007G103100 Sobic009G193500--Sobic007G103100 Sobic009G193500--Sobic002G168500 Sobic009G193500--Sobic008G172300 Sobic009G193500--Sobic001G219700 Sobic006G186600 Sobic006G186600 Sobic009G193500--Sobic006G186600 Sobic001G219700--Sobic006G233700 Sobic001G219700--Sobic004G026500 Sobic001G219700--Sobic001G124100 Sobic001G219700--Sobic003G203300 Sobic008G081900 Sobic008G081900 Sobic001G219700--Sobic008G081900 Sobic002G129400 Sobic002G129400 Sobic001G219700--Sobic002G129400 Sobic005G084500 Sobic005G084500 Sobic001G219700--Sobic005G084500 Sobic009G241200 Sobic009G241200 Sobic001G219700--Sobic009G241200 Sobic002G349100 Sobic002G349100 Sobic001G219700--Sobic002G349100 Sobic001G072700--Sobic007G227700 Sobic001G072700--Sobic004G026500 Sobic010G140600 Sobic010G140600 Sobic001G072700--Sobic010G140600 Sobic001G072700--Sobic008G172300 Sobic003G037300 Sobic003G037300 Sobic001G072700--Sobic003G037300 Sobic001G072700--Sobic009G014100 Sobic006G173600 Sobic006G173600 Sobic001G072700--Sobic006G173600 Sobic003G014300 Sobic003G014300 Sobic001G072700--Sobic003G014300 Sobic004G298900 Sobic004G298900 Sobic001G072700--Sobic004G298900 Sobic004G262700 Sobic004G262700 Sobic002G339300--Sobic004G262700 Sobic002G339300--Sobic004G026500 Sobic002G339300--Sobic009G193500 Sobic002G339300--Sobic001G124100 Sobic002G339300--Sobic001G396000 Sobic003G193200 Sobic003G193200 Sobic002G339300--Sobic003G193200 Sobic003G190000 Sobic003G190000 Sobic002G339300--Sobic003G190000 Sobic002G339300--Sobic002G168500 Sobic002G339300--Sobic010G197000 Sobic006G232600 Sobic006G232600 Sobic003G203300--Sobic006G232600 Sobic008G074000 Sobic008G074000 Sobic003G203300--Sobic008G074000 Sobic001G378100 Sobic001G378100 Sobic003G203300--Sobic001G378100 Sobic009G093100 Sobic009G093100 Sobic003G203300--Sobic009G093100 Sobic009G170200 Sobic009G170200 Sobic003G203300--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic003G203300--Sobic001G504400 Sobic002G081400 Sobic002G081400 Sobic003G203300--Sobic002G081400 Sobic003G203300--Sobic006G233700 Sobic004G207400 Sobic004G207400 Sobic003G203300--Sobic004G207400 Sobic007G169300 Sobic007G169300 Sobic007G227700--Sobic007G169300 Sobic007G227700--Sobic001G072700 Sobic007G227700--Sobic004G026500 Sobic002G193100 Sobic002G193100 Sobic007G227700--Sobic002G193100 Sobic007G227700--Sobic010G140600 Sobic001G029200 Sobic001G029200 Sobic007G227700--Sobic001G029200 Sobic002G001000 Sobic002G001000 Sobic007G227700--Sobic002G001000 Sobic007G227700--Sobic008G081900 Sobic007G227700--Sobic002G349100 Sobic003G381200 Sobic003G381200 Sobic002G276100--Sobic003G381200 Sobic002G276100--Sobic004G026500 Sobic004G181700 Sobic004G181700 Sobic002G276100--Sobic004G181700 Sobic001G159400 Sobic001G159400 Sobic002G276100--Sobic001G159400 Sobic010G138000 Sobic010G138000 Sobic002G276100--Sobic010G138000 Sobic002G276100--Sobic002G168500 Sobic002G276100--Sobic009G193500 Sobic002G276100--Sobic008G172300 Sobic001G268200 Sobic001G268200 Sobic002G276100--Sobic001G268200
Octagon: transcription factors


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