Gene annotation
Transcriptome id Sobic.003G306600.1
Synonym Sb03g035510
Functional annotation acetamidase, putative, expressed
UniProt C5XKW6
Pfam PF03069
Panther DB PTHR31891 PTHR31891:SF1
NCBI CDD -
KEGG Orthology K01455; formamidase
Gene Ontology GO:0016811; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides


Orthologs (automatic annotation)
TAIR AT4G37560 : Acetamidase/Formamidase family protein
RAP-DB (Rice) LOC_Os01g55950.1 : acetamidase, putative, expressed
MaizeGDB (Corn) Zm00025a027436 , Zm00025a039947
Brachypodium KQK09906
Barley HORVU6Hr1G087300.2 , HORVU6Hr1G087300.1 , HORVU3Hr1G074250.17 , HORVU3Hr1G074250.16 , HORVU3Hr1G074250.15 , HORVU3Hr1G074250.14 , HORVU3Hr1G074250.13 , HORVU3Hr1G074250.12 , HORVU3Hr1G074250.19 , HORVU3Hr1G074250.9 , HORVU3Hr1G074250.6 , HORVU3Hr1G074250.5 , HORVU3Hr1G074250.1
Wheat TraesCS6A02G370300 , TraesCS3D02G300700 , TraesCS3D02G300700 , TraesCS3D02G300700 , TraesCS3D02G070800 , TraesCS3A02G301100 , TraesCS6B02G406900 , TraesCS6D02G354000 , TraesCS3A02G071600 , TraesCS3B02G335400 , TraesCS3B02G335400 , TraesCS3B02G335400
Populus -


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cDNA sequences
Sobic.003G306600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
2 Sobic.003G179350 - -
3 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
4 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
5 Sobic.010G171600 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04733: interleukin-1 receptor-associated kinase 4
6 Sobic.004G268300 phosphatase, putative, expressed -
7 Sobic.008G006100 MATE efflux protein, putative, expressed -
8 Sobic.006G168650 - -
9 Sobic.003G203300 stress regulated protein, putative, expressed -
10 Sobic.008G052900 CBS domain-containing protein, putative, expressed -
11 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
12 Sobic.004G026500 expressed protein -
13 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
14 Sobic.003G233700 SET domain-containing protein, putative, expressed -
15 Sobic.004G154400 drought-induced protein 1, putative, expressed -
16 Sobic.003G037300 Twin LOV 1, putative, expressed -
17 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
18 Sobic.010G125833 - -
19 Sobic.009G207900 expressed protein -
20 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase


Gene co-expression network
sample Sobic003G306600 Sobic003G306600 Sobic008G074000 Sobic008G074000 Sobic003G306600--Sobic008G074000 Sobic003G179350 Sobic003G179350 Sobic003G306600--Sobic003G179350 Sobic009G219100 Sobic009G219100 Sobic003G306600--Sobic009G219100 Sobic009G062400 Sobic009G062400 Sobic003G306600--Sobic009G062400 Sobic010G171600 Sobic010G171600 Sobic003G306600--Sobic010G171600 Sobic004G268300 Sobic004G268300 Sobic003G306600--Sobic004G268300 Sobic008G006100 Sobic008G006100 Sobic003G306600--Sobic008G006100 Sobic006G168650 Sobic006G168650 Sobic003G306600--Sobic006G168650 Sobic003G203300 Sobic003G203300 Sobic003G306600--Sobic003G203300 Sobic003G070900 Sobic003G070900 Sobic008G074000--Sobic003G070900 Sobic007G103400 Sobic007G103400 Sobic008G074000--Sobic007G103400 Sobic002G133900 Sobic002G133900 Sobic008G074000--Sobic002G133900 Sobic003G233700 Sobic003G233700 Sobic008G074000--Sobic003G233700 Sobic009G237000 Sobic009G237000 Sobic008G074000--Sobic009G237000 Sobic001G504400 Sobic001G504400 Sobic008G074000--Sobic001G504400 Sobic004G353100 Sobic004G353100 Sobic008G074000--Sobic004G353100 Sobic009G170200 Sobic009G170200 Sobic008G074000--Sobic009G170200 Sobic008G074000--Sobic009G219100 Sobic003G179350--Sobic009G219100 Sobic003G179350--Sobic003G306600 Sobic007G185300 Sobic007G185300 Sobic003G179350--Sobic007G185300 Sobic004G154400 Sobic004G154400 Sobic003G179350--Sobic004G154400 Sobic009G038701 Sobic009G038701 Sobic003G179350--Sobic009G038701 Sobic009G093100 Sobic009G093100 Sobic003G179350--Sobic009G093100 Sobic001G536700 Sobic001G536700 Sobic003G179350--Sobic001G536700 Sobic003G179350--Sobic001G504400 Sobic003G179350--Sobic009G062400 Sobic009G219100--Sobic004G154400 Sobic009G207900 Sobic009G207900 Sobic009G219100--Sobic009G207900 Sobic009G219100--Sobic009G062400 Sobic009G219100--Sobic009G237000 Sobic009G219100--Sobic008G074000 Sobic009G219100--Sobic001G504400 Sobic009G219100--Sobic009G093100 Sobic002G206300 Sobic002G206300 Sobic009G219100--Sobic002G206300 Sobic005G179300 Sobic005G179300 Sobic009G219100--Sobic005G179300 Sobic009G062400--Sobic008G006100 Sobic002G112400 Sobic002G112400 Sobic009G062400--Sobic002G112400 Sobic009G062400--Sobic009G207900 Sobic009G062400--Sobic009G219100 Sobic003G037300 Sobic003G037300 Sobic009G062400--Sobic003G037300 Sobic009G062400--Sobic004G154400 Sobic001G286600 Sobic001G286600 Sobic009G062400--Sobic001G286600 Sobic003G345500 Sobic003G345500 Sobic009G062400--Sobic003G345500 Sobic003G284800 Sobic003G284800 Sobic009G062400--Sobic003G284800 Sobic001G500600 Sobic001G500600 Sobic010G171600--Sobic001G500600 Sobic006G233700 Sobic006G233700 Sobic010G171600--Sobic006G233700 Sobic010G171600--Sobic003G233700 Sobic010G171600--Sobic007G103400 Sobic001G516901 Sobic001G516901 Sobic010G171600--Sobic001G516901 Sobic006G197300 Sobic006G197300 Sobic010G171600--Sobic006G197300 Sobic010G171600--Sobic008G074000 Sobic003G287900 Sobic003G287900 Sobic010G171600--Sobic003G287900 Sobic004G336200 Sobic004G336200 Sobic010G171600--Sobic004G336200 Sobic008G052900 Sobic008G052900 Sobic004G268300--Sobic008G052900 Sobic004G268300--Sobic002G206300 Sobic004G268300--Sobic009G219100 Sobic004G151500 Sobic004G151500 Sobic004G268300--Sobic004G151500 Sobic002G402700 Sobic002G402700 Sobic004G268300--Sobic002G402700 Sobic004G268300--Sobic008G074000 Sobic004G268300--Sobic003G306600 Sobic004G268300--Sobic001G504400 Sobic001G540600 Sobic001G540600 Sobic004G268300--Sobic001G540600 Sobic008G006100--Sobic002G112400 Sobic001G128600 Sobic001G128600 Sobic008G006100--Sobic001G128600 Sobic008G006100--Sobic009G062400 Sobic008G006100--Sobic001G500600 Sobic008G006100--Sobic003G070900 Sobic008G006100--Sobic009G237000 Sobic001G134700 Sobic001G134700 Sobic008G006100--Sobic001G134700 Sobic008G006100--Sobic003G233700 Sobic008G006100--Sobic007G103400 Sobic006G168650--Sobic003G306600 Sobic001G521200 Sobic001G521200 Sobic006G168650--Sobic001G521200 Sobic006G168650--Sobic002G402700 Sobic006G168650--Sobic003G179350 Sobic006G168650--Sobic003G037300 Sobic004G298900 Sobic004G298900 Sobic006G168650--Sobic004G298900 Sobic006G168650--Sobic001G134700 Sobic006G168650--Sobic008G006100 Sobic006G168650--Sobic008G074000 Sobic006G232600 Sobic006G232600 Sobic003G203300--Sobic006G232600 Sobic003G203300--Sobic008G074000 Sobic001G378100 Sobic001G378100 Sobic003G203300--Sobic001G378100 Sobic003G203300--Sobic009G093100 Sobic003G203300--Sobic009G170200 Sobic003G203300--Sobic001G504400 Sobic002G081400 Sobic002G081400 Sobic003G203300--Sobic002G081400 Sobic003G203300--Sobic006G233700 Sobic004G207400 Sobic004G207400 Sobic003G203300--Sobic004G207400
Octagon: transcription factors


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