Gene annotation
Transcriptome id Sobic.009G219100.2,Sobic.009G219100.1
Synonym STN7, Sb09g027380
Functional annotation expressed high in San Chi San (an efficient nitrogen user) (PubMedID : 28697783)
serine/threonine-protein kinase SNT7, chloroplast precursor( (PubMedID : 26759170,(PubMedID : 24597475)
serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed
UniProt A0A1B6P9S5 , A0A1B6P9W0
Pfam PF00069
Panther DB PTHR11584 PTHR11584:SF316
NCBI CDD KOG0594; Protein kinase PCTAIRE and related kinases
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G68830 : STT7 homolog STN7
RAP-DB (Rice) LOC_Os05g47560.1 : serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044442
Brachypodium KQK05055
Barley HORVU1Hr1G078410.4 , HORVU1Hr1G078410.3 , HORVU1Hr1G078410.2 , HORVU1Hr1G078410.1
Wheat TraesCS1D02G376000 , TraesCS1A02G369800 , TraesCS1B02G388900
Populus -


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cDNA sequences
Sobic.009G219100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G154400 drought-induced protein 1, putative, expressed -
2 Sobic.009G207900 expressed protein -
3 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
4 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
5 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
6 Sobic.001G504400 expressed protein -
7 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
8 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
9 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
10 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
11 Sobic.008G052900 CBS domain-containing protein, putative, expressed -
12 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
13 Sobic.004G019800 MATE domain containing protein, expressed -
14 Sobic.009G038701 - -
15 Sobic.001G536700 expressed protein -
16 Sobic.003G179350 - -
17 Sobic.006G212800 expressed protein -
18 Sobic.003G203300 stress regulated protein, putative, expressed -
19 Sobic.003G233700 SET domain-containing protein, putative, expressed -
20 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -


Gene co-expression network
sample Sobic009G219100 Sobic009G219100 Sobic004G154400 Sobic004G154400 Sobic009G219100--Sobic004G154400 Sobic009G207900 Sobic009G207900 Sobic009G219100--Sobic009G207900 Sobic009G062400 Sobic009G062400 Sobic009G219100--Sobic009G062400 Sobic009G237000 Sobic009G237000 Sobic009G219100--Sobic009G237000 Sobic008G074000 Sobic008G074000 Sobic009G219100--Sobic008G074000 Sobic001G504400 Sobic001G504400 Sobic009G219100--Sobic001G504400 Sobic009G093100 Sobic009G093100 Sobic009G219100--Sobic009G093100 Sobic002G206300 Sobic002G206300 Sobic009G219100--Sobic002G206300 Sobic005G179300 Sobic005G179300 Sobic009G219100--Sobic005G179300 Sobic004G154400--Sobic009G219100 Sobic001G286600 Sobic001G286600 Sobic004G154400--Sobic001G286600 Sobic004G154400--Sobic009G062400 Sobic010G058200 Sobic010G058200 Sobic004G154400--Sobic010G058200 Sobic002G136100 Sobic002G136100 Sobic004G154400--Sobic002G136100 Sobic004G154400--Sobic009G207900 Sobic004G006400 Sobic004G006400 Sobic004G154400--Sobic004G006400 Sobic004G154400--Sobic009G237000 Sobic006G158700 Sobic006G158700 Sobic004G154400--Sobic006G158700 Sobic006G212800 Sobic006G212800 Sobic009G207900--Sobic006G212800 Sobic001G180200 Sobic001G180200 Sobic009G207900--Sobic001G180200 Sobic009G207900--Sobic002G206300 Sobic009G207900--Sobic001G504400 Sobic009G207900--Sobic009G219100 Sobic007G135800 Sobic007G135800 Sobic009G207900--Sobic007G135800 Sobic009G038701 Sobic009G038701 Sobic009G207900--Sobic009G038701 Sobic003G073800 Sobic003G073800 Sobic009G207900--Sobic003G073800 Sobic009G207900--Sobic009G062400 Sobic008G006100 Sobic008G006100 Sobic009G062400--Sobic008G006100 Sobic002G112400 Sobic002G112400 Sobic009G062400--Sobic002G112400 Sobic009G062400--Sobic009G207900 Sobic009G062400--Sobic009G219100 Sobic003G037300 Sobic003G037300 Sobic009G062400--Sobic003G037300 Sobic009G062400--Sobic004G154400 Sobic009G062400--Sobic001G286600 Sobic003G345500 Sobic003G345500 Sobic009G062400--Sobic003G345500 Sobic003G284800 Sobic003G284800 Sobic009G062400--Sobic003G284800 Sobic007G103400 Sobic007G103400 Sobic009G237000--Sobic007G103400 Sobic004G353100 Sobic004G353100 Sobic009G237000--Sobic004G353100 Sobic006G102000 Sobic006G102000 Sobic009G237000--Sobic006G102000 Sobic002G298800 Sobic002G298800 Sobic009G237000--Sobic002G298800 Sobic010G035400 Sobic010G035400 Sobic009G237000--Sobic010G035400 Sobic009G237000--Sobic001G504400 Sobic003G233700 Sobic003G233700 Sobic009G237000--Sobic003G233700 Sobic007G108900 Sobic007G108900 Sobic009G237000--Sobic007G108900 Sobic009G237000--Sobic008G074000 Sobic003G070900 Sobic003G070900 Sobic008G074000--Sobic003G070900 Sobic008G074000--Sobic007G103400 Sobic002G133900 Sobic002G133900 Sobic008G074000--Sobic002G133900 Sobic008G074000--Sobic003G233700 Sobic008G074000--Sobic009G237000 Sobic008G074000--Sobic001G504400 Sobic008G074000--Sobic004G353100 Sobic009G170200 Sobic009G170200 Sobic008G074000--Sobic009G170200 Sobic008G074000--Sobic009G219100 Sobic001G504400--Sobic002G206300 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G258200 Sobic001G258200 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic008G033000 Sobic008G033000 Sobic001G504400--Sobic008G033000 Sobic001G504400--Sobic001G180200 Sobic001G378100 Sobic001G378100 Sobic001G504400--Sobic001G378100 Sobic001G077300 Sobic001G077300 Sobic009G093100--Sobic001G077300 Sobic001G359300 Sobic001G359300 Sobic009G093100--Sobic001G359300 Sobic004G019800 Sobic004G019800 Sobic009G093100--Sobic004G019800 Sobic006G065100 Sobic006G065100 Sobic009G093100--Sobic006G065100 Sobic001G536700 Sobic001G536700 Sobic009G093100--Sobic001G536700 Sobic009G073900 Sobic009G073900 Sobic009G093100--Sobic009G073900 Sobic009G093100--Sobic001G378100 Sobic009G093100--Sobic002G206300 Sobic001G333800 Sobic001G333800 Sobic009G093100--Sobic001G333800 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic002G206300--Sobic001G536700 Sobic002G206300--Sobic009G207900 Sobic002G206300--Sobic001G258200 Sobic008G129900 Sobic008G129900 Sobic002G206300--Sobic008G129900 Sobic001G217900 Sobic001G217900 Sobic002G206300--Sobic001G217900 Sobic003G341300 Sobic003G341300 Sobic002G206300--Sobic003G341300 Sobic006G090100 Sobic006G090100 Sobic005G179300--Sobic006G090100 Sobic005G179300--Sobic001G077300 Sobic005G179300--Sobic003G073800 Sobic005G179300--Sobic006G212800 Sobic005G179300--Sobic009G207900 Sobic001G207800 Sobic001G207800 Sobic005G179300--Sobic001G207800 Sobic005G179300--Sobic009G219100 Sobic004G271600 Sobic004G271600 Sobic005G179300--Sobic004G271600 Sobic002G081400 Sobic002G081400 Sobic005G179300--Sobic002G081400
Octagon: transcription factors


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